#File:params-MRR-nMap+noDrop.map #"Revised: 4-4-2009" # -addOutfilePostfix:"-noMap+noDrop" -addPrologue:data.MRR/prolog.html -addEpilogue:data.MRR/epilogue.html -addRowNumbers -addTableName:"mAdb Microarray Retrieval Report" -inputDir:data.MRR -outputDir:html/data.MRR -tablesDir:data.Table # -allowHdrDups -alternateRowBackgroundColor:white -rmvTrailingBlankRowsAndColumns #-shrinkBigCells:25,-5 -shrinkBigCells:1,-5 -hdrLines:2 -hasEmptyLineBeforeTable -makePrefaceHTML -mapOptionsLists # #"Reorder columns to left side of Table" -reorderColumn:Gene,1 -reorderColumn:"A-B Mean Difference",2 -reorderColumn:Difference,3 -reorderColumn:"A Mean",4 -reorderColumn:"B Mean",5 -reorderColumn:"A-B p-Value",6 -reorderColumn:"p-Value",7 -reorderColumn:"Well ID",8 -reorderColumn:"Feature ID",9 -reorderColumn:"Description",10 # #"Sort rows by column - use whichever comes first" -sortRowsByColumn:"A-B Mean Difference",Descending -sortRowsByColumn:Difference,Descending -sortRowsByColumn:p-Value,Ascending -sortRowsByColumn:Gene,Ascending # #"These map mAdb Feature Report data to Bioinformatics databases" -hrefData:"Well ID",http://madb.nci.nih.gov/cgi-bin/clone_report.cgi?CLONE=WID%3A -hrefData:Gene,http://www-bimas.cit.nih.gov/cgi-bin/cards/carddisp.pl?gene= -hrefData:"Entrez GeneID",http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene&cmd=retrieve&dopt=graphics&list_uids= -hrefData:"Feature ID",https://www.affymetrix.com/LinkServlet?probeset= # #"----------- end --------- "