A	1	02-09-07_Hennighausen_PK_Mouse430_2_M42	GSP-EG003.1 Hennighausen
	A	2	02-09-07_Hennighausen_PK_Mouse430_2_M43	GSP-EG003.1 Hennighausen
	A	3	02-09-07_Hennighausen_PK_Mouse430_2_M48	GSP-EG003.1 Hennighausen
	B	4	06-10-08_Hennighausen_4PK_Mouse430_2_4035KO	GSP-EG003.2 Hennighausen
	B	5	06-10-08_Hennighausen_5PK_Mouse430_2_4036KO	GSP-EG003.2 Hennighausen
	B	6	06-10-08_Hennighausen_6PK_Mouse430_2_4042KO	GSP-EG003.2 Hennighausen
The input data set contained 45101 genes
The filtered output data set contains 502 genes
35579 gene rows removed by Include where <b>A-B T-test p-value (two tailed)</b> <= 0.05 
9020 gene rows removed by Include where <b>A-B Mean Difference</b> >= 1 

A	A	A	B	B	B
02-09-07_Hennighausen_PK_Mouse430_2_M42 GSP-EG003.1 Hennighausen	02-09-07_Hennighausen_PK_Mouse430_2_M43 GSP-EG003.1 Hennighausen	02-09-07_Hennighausen_PK_Mouse430_2_M48 GSP-EG003.1 Hennighausen	06-10-08_Hennighausen_4PK_Mouse430_2_4035KO GSP-EG003.2 Hennighausen	06-10-08_Hennighausen_5PK_Mouse430_2_4036KO GSP-EG003.2 Hennighausen	06-10-08_Hennighausen_6PK_Mouse430_2_4042KO GSP-EG003.2 Hennighausen	A-B p-Value	A-B Mean Difference	A Mean	B Mean	Well ID	Feature ID	Map	mgB37_Probe Chr:Start-Stop	mgB37_Probe Cytoband	mgB37_RefSeq Chr:Start-Stop	mgB37_RefSeq Cytoband	Annotation_Src	UniGene	RefSeq	Refseqs_Hit	geneIDS_Hit	Entrez GeneID	Locus Tag	Gene	Description	BioCarta  Pathways	KEGG Pathways	Gene Ontology Terms	GO Tier2 Component	GO Tier3 Component	GO Tier2 Function	GO Tier3 Function	GO Tier2 Process	GO Tier3 Process
801.1414	853.2240	850.5619	313.8703	278.6790	216.3908	0.0074610457	1.64700	9.70499	8.05799	1350144	AFFX-DapX-M_at						IPA							  	B. subtilis  GEN=dapB, jojF  DB_XREF=gb:L38424.1  NOTE=SIF corresponding to nucleotides 2020-2580 of gb:L38424.1  DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-									
1230.4274	1235.7222	1185.5707	313.7877	282.7195	231.2158	0.0030481436	2.15249	10.24915	8.09666	1350142	AFFX-DapX-3_at						IPA							  	B. subtilis  GEN=jojG  DB_XREF=gb:L38424.1  NOTE=SIF corresponding to nucleotides 2684-3130 of gb:L38424.1  DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carbox									
75.5921	75.6916	79.0074	38.5685	30.1528	32.0137	0.006235222	1.20065	6.26205	5.06140	1350147	AFFX-LysX-M_at						IPA							  	B. subtilis  GEN=lys  DB_XREF=gb:X17013.1  NOTE=SIF corresponding to nucleotides 720-990 of gb:X17013.1, not 100% identical  DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).									
235.9080	284.5286	290.8588	93.6724	78.6248	77.9344	0.00020637066	1.69601	8.07290	6.37688	1350145	AFFX-LysX-3_at						IPA							  	B. subtilis  GEN=lys  DB_XREF=gb:X17013.1  NOTE=SIF corresponding to nucleotides 1061-1343 of gb:X17013.1, not 100% identical  DEF=B subtilis lys gene for diaminopimelate decarboxylase (EC 4.1.1.20).									
59.2287	57.7493	62.6384	28.0724	28.9784	28.9830	0.0001829166	1.06127	5.90298	4.84171	1350151	AFFX-PheX-M_at						IPA							  	B. subtilis  GEN=pheA  DB_XREF=gb:M24537.1  NOTE=SIF corresponding to nucleotides 2437-2828 of gb:M24537.1  DEF=Bacillus subtillis sporulation protein (spoOB), GTP-binding protein (obg), phenylalanine biosynthesis associated protein (pheB), and monofuncti									
129.6274	121.9468	122.9945	67.8354	57.9767	48.7622	0.012339394	1.11391	6.96359	5.84969	1350154	AFFX-ThrX-M_at						IPA							  	B. subtilis  GEN=thrC, thrB  DB_XREF=gb:X04603.1  NOTE=SIF corresponding to nucleotides 995-1562 of gb:X04603.1, not 100% identical  DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase (EC 2.7.1.39 and EC 4.2.99.2, respectivel									
591.8521	591.8204	623.2756	198.0631	173.2261	160.0656	0.001380804	1.77100	9.23395	7.46295	1350152	AFFX-ThrX-3_at						IPA							  	B. subtilis  GEN=thrB  DB_XREF=gb:X04603.1  NOTE=SIF corresponding to nucleotides 1689-2151 of gb:X04603.1  DEF=B. subtilis thrB and thrC genes for homoserine kinase and threonine synthase (EC 2.7.1.39 and EC 4.2.99.2, respectively).									
240.0350	236.1312	269.3019	142.6960	122.4563	92.2594	0.01975214	1.08103	7.95454	6.87352	1350163	AFFX-r2-Bs-dap-5_at						IPA							  										
758.4699	829.4598	767.0330	289.8911	234.9433	167.2898	0.013929009	1.80146	9.61537	7.81391	1350164	AFFX-r2-Bs-dap-M_at						IPA							  										
1618.9296	1732.5477	1701.7583	458.7377	358.8226	318.0669	0.003997732	2.17016	10.71744	8.54728	1350162	AFFX-r2-Bs-dap-3_at						IPA							  										
56.7597	74.1617	88.6926	32.6149	21.5164	25.0545	0.0046491776	1.46944	6.17005	4.70061	1350166	AFFX-r2-Bs-lys-5_at						IPA							  										
80.6100	87.4554	89.5790	27.5300	23.6938	21.8166	0.00062609227	1.82391	6.42282	4.59891	1350167	AFFX-r2-Bs-lys-M_at						IPA							  										
108.1203	149.7591	123.4531	35.2576	35.3252	34.8098	0.0053538023	1.84230	6.97694	5.13464	1350165	AFFX-r2-Bs-lys-3_at						IPA							  										
62.2146	79.5580	71.2665	35.2576	29.0165	24.8733	0.0030904974	1.26436	6.14276	4.87840	1350169	AFFX-r2-Bs-phe-5_at						IPA							  										
125.8205	112.5800	119.9266	44.7214	39.4096	36.0316	0.00059207034	1.58049	6.89868	5.31819	1350170	AFFX-r2-Bs-phe-M_at						IPA							  										
255.7814	445.3617	330.4077	150.3424	116.6973	87.3953	0.0089168869	1.53916	8.38857	6.84941	1350168	AFFX-r2-Bs-phe-3_at						IPA							  										
677.5051	711.9807	688.4113	202.5408	211.5588	178.5492	0.00078623965	1.81325	9.43564	7.62239	1350180	AFFX-r2-Bs-thr-3_s_at						IPA							  										
3016.4046	3036.3917	2964.8620	1332.5964	1340.1888	1336.4467	3.4424281e-05	1.16936	11.55350	10.38414	1350161	AFFX-MURINE_b1_at						IPA							  	M. musculus  GEN=b1  DB_XREF=gb:U01310.1  NOTE=SIF corresponding to nucleotides 5-75 of gb:U01310.1  DEF=Mus musculus C57 Black6 BC1 scRNA.									
1523.0491	1576.7918	1560.4356	390.0408	477.4949	303.1974	0.0084018217	2.01744	10.60109	8.58365	1327679	1415899_at	8 C2-D1|8 38.6 cM	chr8:87500883-87501393	8 C3			UGA	Mm.1167				16477		  Junb	Jun-B oncogene, mRNA (cDNA clone MGC:6021 IMAGE:3592704)	GATA3 participate in activating the Th2 cytokine genes expression		cellular process;; decidualization;; DNA binding;; embryonic process involved in female pregnancy;; in utero embryonic development;; labyrinthine layer blood vessel development;; nucleus;; positive regulation of cell differentiation;; protein dimerization activity;; regulation of cell cycle;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; transcription;; transcription factor activity;; trophectodermal cell differentiation;; trophectodermal cell differentiation;; vasculogenesis	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; metabolic process;; multi-organism process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell cycle;; cellular developmental process;; cellular metabolic process;; embryonic development;; female pregnancy;; macromolecule metabolic process;; multicellular organism reproduction;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; reproductive process;; reproductive process in a multicellular organism
503.5929	520.5099	516.2546	176.3360	171.2954	133.1809	0.0052767493	1.69069	9.00394	7.31326	1343221	1416065_a_at	8	chr8:11611620-11611723	8 A1.1	chr8:11611582-11635689	8 A1.1	RSQ	Mm.12459	NM_133971	1	1	102334		  Ankrd10	ankyrin repeat domain 10 (Ankrd10), mRNA.									
371.1123	341.8106	348.9457	133.9404	151.6357	144.8781	8.3593405e-05	1.30367	8.46654	7.16287	1327807	1416081_at	8	chr8:81863358-81867687	8 C2	chr8:81862293-81923367	8 C2	RSQ	Mm.223717	NM_008539	1	1	17125		  Smad1	MAD homolog 1 (Drosophila) (Smad1), mRNA.	CTCF: First Multivalent Nuclear Factor	TGF-beta signaling pathway CLASS Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350]	BMP signaling pathway;; BMP signaling pathway;; BMP signaling pathway;; cytoplasm;; gamete generation;; hindbrain development;; homeostatic process;; inflammatory response;; intracellular;; MAPKKK cascade;; mesodermal cell fate commitment;; midbrain development;; negative regulation of cell proliferation;; nucleus;; osteoblast fate commitment;; positive regulation of gene expression;; positive regulation of osteoblast differentiation;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; regulation of transcription from RNA polymerase II promoter;; regulation of transcription, DNA-dependent;; RNA polymerase II transcription factor activity;; transcription;; transcription factor activity;; transcription factor complex;; transforming growth factor beta receptor signaling pathway	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; RNA polymerase II transcription factor activity;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell communication;; cell proliferation;; cellular developmental process;; cellular metabolic process;; embryonic development;; gamete generation;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; nitrogen compound metabolic process;; ossification;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; reproductive process;; response to external stimulus;; response to stress;; sexual reproduction;; tissue remodeling
3446.3923	3507.7425	3435.3537	738.2315	711.9717	643.7601	0.00049567336	2.31315	11.75781	9.44466	1327844	1416125_at	17 13.0 cM	chr17:28536264-28536617	17 A3.3	chr17:28536039-28623057	17 A3.3	RSQ	Mm.276405	NM_010220	1	1	14229		  Fkbp5	FK506 binding protein 5 (Fkbp5), mRNA.			binding;; cytoplasm;; isomerase activity;; nucleus;; peptidyl-prolyl cis-trans isomerase activity;; protein binding;; protein folding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	isomerase activity;; protein binding	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
1102.7307	1105.3054	1109.2005	376.9413	413.3499	389.1086	0.00065326466	1.49298	10.11080	8.61782	1327847	1416129_at	4	chr4:150242409-150242794	4 E2	chr4:150229199-150242989	4 E2	RSQ	Mm.318841	NM_133753	1	1	74155	RP23-272N19.4	  Errfi1	ERBB receptor feedback inhibitor 1 (Errfi1), mRNA.			cytoplasm;; cytosol;; protein binding;; receptor activity;; stress-activated protein kinase signaling pathway	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; regulation of biological process;; response to stimulus	cell communication;; cellular response to stimulus;; regulation of biological process;; regulation of cellular process;; response to stress
2173.3450	2201.8324	2177.4033	692.9852	770.9827	834.4657	0.0024946744	1.51555	11.09286	9.57731	1327922	1416225_at	3 71.2 cM	chr3:137949846-137953543	3 G3	chr3:137940608-137953655	3 G3	RSQ	Mm.2409	NM_007409	1	1	11522		  Adh1	alcohol dehydrogenase 1 (class I) (Adh1), mRNA.		1- and 2-Methylnaphthalene degradation;; 3-Chloroacrylic acid degradation;; Drug metabolism - cytochrome P450;; Fatty acid metabolism;; Glycolysis / Gluconeogenesis;; Metabolic pathways CLASS Metabolism; Carbohydrate Metabolism; Glycolysis / Gluconeogenesis [PATH:mmu00010] Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:mmu00071] Metabolism; Amino Acid Metabolism; Tyrosine metabolism [PATH:mmu00350] Metabolism; Metabolism of Cofactors and Vitamins; Retinol metabolism [PATH:mmu00830] Metabolism; Xenobiotics;; Metabolism of xenobiotics by cytochrome P450;; Retinol metabolism;; Tyrosine metabolism	alcohol dehydrogenase (NAD) activity;; alcohol dehydrogenase (NAD) activity;; behavioral response to ethanol;; cytoplasm;; ethanol catabolic process;; ethanol catabolic process;; intracellular;; metal ion binding;; mitochondrion;; oxidation reduction;; oxidoreductase activity;; protein homodimerization activity;; response to retinoic acid;; response to steroid hormone stimulus;; response to testosterone stimulus;; retinoic acid metabolic process;; retinoic acid metabolic process;; retinoid metabolic process;; retinol metabolic process;; retinol metabolic process;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ion binding;; oxidoreductase activity;; protein binding	biological regulation;; cellular process;; metabolic process;; multicellular organismal process;; response to stimulus	adult behavior;; alcohol metabolic process;; behavior;; catabolic process;; cellular metabolic process;; hormone metabolic process;; oxidation reduction;; primary metabolic process;; regulation of biological quality;; response to chemical stimulus;; response to endogenous stimulus;; response to external stimulus;; secondary metabolic process
6338.8642	6196.7090	6267.6941	669.4725	1509.8063	737.5304	0.017096455	2.78914	12.61367	9.82453	1327943	1416250_at	1 71.0 cM	chr1:135973961-135975525	1 E4	chr1:135971441-135975732	1 E4	RSQ	Mm.392646	NM_007570	1	1	12227		  Btg2	B-cell translocation gene 2, anti-proliferative (Btg2), mRNA.	BTG family proteins and cell cycle regulation		anterior/posterior pattern formation;; negative regulation of apoptosis;; neuron differentiation;; protein amino acid methylation;; protein binding;; regulation of transcription, DNA-dependent;; response to DNA damage stimulus;; transcription			binding	protein binding	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; biosynthetic process;; cell death;; cellular developmental process;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; pattern specification process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; response to stress
963.3854	916.9217	957.6589	459.9460	380.5199	303.6338	0.015278896	1.33088	9.88533	8.55445	1328081	1416431_at	18	chr18:67561958-67562376	18 E1	chr18:67550384-67562403	18 E1	RSQ	Mm.181860	NM_026473	1	1	67951		  Tubb6	tubulin, beta 6 (Tubb6), mRNA.		Gap junction CLASS Cellular Processes; Cell Communication; Gap junction [PATH:mmu04540]	GTP binding;; GTPase activity;; microtubule;; microtubule-based movement;; microtubule-based process;; nucleotide binding;; protein complex;; protein polymerization;; structural molecule activity	cell;; cell part;; macromolecular complex;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; non-membrane-bounded organelle;; organelle part;; protein complex	binding;; catalytic activity;; structural molecule activity	hydrolase activity;; nucleotide binding	anatomical structure formation;; cellular component biogenesis;; cellular component organization;; cellular process	cellular component assembly;; cellular macromolecular complex subunit organization;; macromolecular complex subunit organization;; microtubule-based process;; protein complex biogenesis
2725.9996	2806.0964	2673.9977	416.5916	379.8765	532.6616	0.0025947609	2.64092	11.41723	8.77632	1328194	1416576_at	11	chr11:117827755-117827967	11 E2	chr11:117827392-117830476	11 E2	RSQ	Mm.3468	NM_007707	1	1	12702	RP23-268N22.6	  Socs3	suppressor of cytokine signaling 3 (Socs3), mRNA.	IL-2 Receptor Beta Chain in T cell Activation;; IL22 Soluble Receptor Signaling Pathway	Adipocytokine signaling pathway;; Insulin signaling pathway;; Jak-STAT signaling pathway;; Type II diabetes mellitus CLASS Genetic Information Processing; Folding, Sorting and Degradation; Ubiquitin mediated proteolysis [PATH:mmu04120] Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910] Cellular Processes; Endocrin;; Ubiquitin mediated proteolysis	branching involved in embryonic placenta morphogenesis;; intracellular signaling cascade;; modification-dependent protein catabolic process;; negative regulation of insulin receptor signaling pathway;; negative regulation of signal transduction;; placenta blood vessel development;; positive regulation of cell differentiation;; positive regulation of cell differentiation;; protein binding;; regulation of cell differentiation;; regulation of cell differentiation;; regulation of growth;; regulation of protein amino acid phosphorylation;; spongiotrophoblast differentiation;; spongiotrophoblast differentiation;; trophoblast giant cell differentiation;; trophoblast giant cell differentiation			binding	protein binding	biological regulation;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure morphogenesis;; catabolic process;; cell communication;; cellular developmental process;; cellular metabolic process;; cellular response to stimulus;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of response to stimulus;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of growth;; regulation of metabolic process;; regulation of response to stimulus;; response to chemical stimulus;; response to endogenous stimulus
3433.7399	3387.4116	3384.3741	1196.2037	1610.0241	1432.8699	0.0092251192	1.27813	11.73207	10.45394	1343341	1416600_a_at	16 C4|16 62.0 cM	chr16:92392241-92392607	16 C4			UGA	Mm.265744				54720		  Rcan1	Regulator of calcineurin 1, mRNA (cDNA clone MGC:19348 IMAGE:4236038)			calcium-mediated signaling;; cytoplasm;; nucleus;; regulation of phosphoprotein phosphatase activity;; skeletal muscle fiber development	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle			biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; cell communication;; cellular developmental process;; cellular metabolic process;; multicellular organismal development;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of molecular function
1441.1380	1491.7205	1502.2351	568.4736	685.9574	693.4115	0.0046683857	1.19272	10.52955	9.33683	1343342	1416601_a_at	16 62.0 cM	chr16:92393721-92397682	16 C4	chr16:92392197-92400322	16 C4	RSQ	Mm.265744	NM_019466	2	1	54720		  Rcan1	regulator of calcineurin 1 (Rcan1), transcript variant 2, mRNA.			calcium-mediated signaling;; cytoplasm;; nucleus;; regulation of phosphoprotein phosphatase activity;; skeletal muscle fiber development	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle			biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; cell communication;; cellular developmental process;; cellular metabolic process;; multicellular organismal development;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of molecular function
5921.1519	5934.3151	5847.0438	1668.9639	1584.6678	1974.9297	0.0028229678	1.76591	12.52667	10.76076	1328407	1416840_at	X	chrX:10296247-10296743	X A1.1	chrX:10294619-10296823	X A1.1	RSQ	Mm.29429	NM_026524	1	1	68041	RP23-130J1.1	  Mid1ip1	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) (Mid1ip1), mRNA.			cytoplasm;; microtubule;; microtubule cytoskeleton;; negative regulation of microtubule depolymerization;; nucleus;; protein binding;; protein C-terminus binding	cell;; cell part;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part	binding	protein binding	biological regulation;; cellular component organization;; cellular process;; metabolic process;; negative regulation of biological process;; regulation of biological process	cellular component disassembly;; cellular macromolecular complex subunit organization;; cellular metabolic process;; macromolecular complex subunit organization;; macromolecule metabolic process;; microtubule-based process;; negative regulation of biological process;; negative regulation of cellular component organization;; negative regulation of cellular process;; negative regulation of metabolic process;; organelle organization;; primary metabolic process;; regulation of biological process;; regulation of cellular component organization;; regulation of cellular process;; regulation of metabolic process
694.7075	689.8186	680.7294	292.9109	344.5294	265.9390	0.0078322303	1.20117	9.42709	8.22592	1343415	1416983_s_at	3	chr3:52153576-52154004	3 C			UG5	Mm.395558						  	Transcribed locus									
4687.2495	4806.2947	4760.1034	280.4741	281.0701	277.9745	1.2099936e-07	4.08556	12.21400	8.12844	1328588	1417065_at	18 16.0 cM	chr18:35024067-35024594	18 B1	chr18:35020860-35024610	18 B1	RSQ	Mm.181959	NM_007913	1	1	13653		  Egr1	early growth response 1 (Egr1), mRNA.	Phosphorylation of MEK1 by cdk5/p35 down regulates the MAP kinase pathway	Prion diseases CLASS Human Diseases; Neurodegenerative Diseases; Prion diseases [PATH:mmu05020]	DNA binding;; intracellular;; metal ion binding;; negative regulation of transcription from RNA polymerase II promoter;; nucleic acid binding;; nucleus;; nucleus;; regulation of transcription, DNA-dependent;; response to protein stimulus;; T cell differentiation;; transcription;; transcription factor activity;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	ion binding;; nucleic acid binding;; transcription factor activity	biological regulation;; cellular process;; developmental process;; immune system process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; biosynthetic process;; cell activation;; cellular developmental process;; cellular metabolic process;; immune system development;; leukocyte activation;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; response to chemical stimulus
1405.0368	1518.9285	1415.4589	563.8303	607.9311	489.9297	0.0015519966	1.38966	10.49743	9.10777	1343431	1417068_a_at	2	chr2:167801006-167802371	2 H3	chr2:167757826-167804885	2 H3	RSQ	Mm.277916	NM_011201	1	1	19246	RP23-58A8.1	  Ptpn1	protein tyrosine phosphatase, non-receptor type 1 (Ptpn1), mRNA.		Adherens junction;; Insulin signaling pathway CLASS Cellular Processes; Cell Communication; Adherens junction [PATH:mmu04520] Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910]	dephosphorylation;; endoplasmic reticulum;; hydrolase activity;; insulin receptor signaling pathway;; membrane;; phosphatase activity;; phosphoprotein phosphatase activity;; protein amino acid dephosphorylation;; protein tyrosine phosphatase activity;; receptor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane-bounded organelle	catalytic activity;; molecular transducer activity	hydrolase activity;; signal transducer activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process;; response to stimulus	cell communication;; cellular metabolic process;; cellular response to stimulus;; macromolecule metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; response to chemical stimulus;; response to endogenous stimulus
1169.8554	1150.9218	1121.9598	377.9926	306.8713	352.0756	0.0018649826	1.73635	10.16416	8.42782	1328869	1417406_at	7	chr7:28274785-28275298	7 A3	chr7:28271971-28275333	7 A3	RSQ	Mm.153684	NM_018820	1	1	55942		  Sertad1	SERTA domain containing 1 (Sertad1), mRNA.			cytoplasm;; negative regulation of cell growth;; nucleus;; positive regulation of transcription;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; transcription activator activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	protein binding;; transcription activator activity	biological regulation;; cellular process;; growth;; metabolic process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process	biosynthetic process;; cell growth;; cellular metabolic process;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of growth;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of growth;; regulation of metabolic process
1017.8614	1010.3066	975.0140	455.7398	494.0292	532.3652	0.0021536322	1.02146	9.96706	8.94560	1328922	1417472_at	15 43.3 cM	chr15:77591331-77591589	15 E1	chr15:77591018-77672545	15 E1	RSQ	Mm.29677	NM_022410	1	1	17886	AL583886.1	  Myh9	myosin, heavy polypeptide 9, non-muscle (Myh9), transcript variant 1, mRNA.		Regulation of actin cytoskeleton CLASS Cellular Processes; Cell Motility; Regulation of actin cytoskeleton [PATH:mmu04810] Cellular Processes; Cell Communication; Tight junction [PATH:mmu04530];; Tight junction	actin binding;; actin filament binding;; actin filament-based movement;; actin-dependent ATPase activity;; ADP binding;; ATP binding;; calmodulin binding;; cell adhesion;; cell cortex;; cell morphogenesis involved in differentiation;; cell motion;; cell-cell adherens junction;; cell-cell adhesion;; cortical cytoskeleton;; cytoplasm;; establishment of meiotic spindle localization;; establishment of T cell polarity;; immunological synapse;; immunological synapse;; in utero embryonic development;; meiotic metaphase I;; meiotic spindle organization;; microfilament motor activity;; motor activity;; myoblast fusion;; myosin complex;; neuromuscular junction;; nucleotide binding;; plasma membrane;; plasma membrane;; protein binding;; regulation of cell shape;; spindle;; stress fiber;; stress fiber;; uropod;; uropod;; uropod organization	cell;; cell part;; macromolecular complex;; organelle;; organelle part;; synapse	cell part;; cell projection;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; neuromuscular junction;; non-membrane-bounded organelle;; organelle part;; protein complex;; trailing edge	binding;; catalytic activity	hydrolase activity;; nucleoside binding;; nucleotide binding;; protein binding	anatomical structure formation;; biological adhesion;; biological regulation;; cellular component organization;; cellular process;; developmental process;; establishment of localization;; immune system process;; localization;; multicellular organismal process;; regulation of biological process	actin filament-based process;; anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell activation;; cell adhesion;; cell cycle;; cell cycle process;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; cellular localization;; embryonic development;; establishment of localization;; establishment of localization in cell;; establishment of organelle localization;; establishment or maintenance of cell polarity;; leukocyte activation;; localization of cell;; membrane organization;; microtubule-based process;; multicellular organismal development;; organelle organization;; regulation of biological process;; regulation of biological quality;; regulation of cellular component organization;; regulation of cellular process;; regulation of developmental process;; syncytium formation;; transport
124.0008	114.1493	127.4615	46.8627	41.6515	40.4314	8.9879026e-05	1.50495	6.92763	5.42269	1328931	1417483_at	16	chr16:55811560-55812070	16 C1.1	chr16:55811489-55838754	16 C1.1	RSQ		NM_001159395	3	1	80859		  Nfkbiz	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta (Nfkbiz), transcript variant 3, mRNA.			inflammatory response;; nucleus;; regulation of transcription, DNA-dependent;; transcription	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle			biological regulation;; cellular process;; metabolic process;; regulation of biological process;; response to stimulus	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; response to external stimulus;; response to stress
3179.7873	3159.6374	3214.7762	1206.5789	1184.2030	1255.4512	0.00011318412	1.39012	11.63692	10.24680	1343507	1417500_a_at	2 89.0 cM	chr2:157942444-157942708	2 H1	chr2:157942140-157972128	2 H1	RSQ	Mm.330731	NM_009373	1	1	21817	RP23-396G1.2	  Tgm2	transglutaminase 2, C polypeptide (Tgm2), mRNA.	Phospholipase C d1 in phospholipid associated cell signaling	Huntington's disease CLASS Human Diseases; Neurodegenerative Diseases; Huntington's disease [PATH:mmu05016]	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger;; acyltransferase activity;; branching involved in salivary gland morphogenesis;; calcium ion binding;; cytoplasm;; cytosol;; G-protein coupled receptor protein signaling pathway;; GTP binding;; membrane;; metal ion binding;; peptide cross-linking;; positive regulation of cell adhesion;; protein-glutamine gamma-glutamyltransferase activity;; proteinaceous extracellular matrix;; salivary gland cavitation;; transferase activity	cell;; cell part;; extracellular region;; extracellular region part	cell part;; extracellular matrix;; extracellular region part;; intracellular;; intracellular part;; membrane	binding;; catalytic activity	ion binding;; nucleotide binding;; transferase activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; positive regulation of biological process;; positive regulation of cellular process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of molecular function
460.5297	463.9381	443.0131	178.4857	213.4886	193.0964	0.0021148495	1.22843	8.83205	7.60362	1328951	1417507_at	11 65.0 cM	chr11:105795150-105795596	11 E1	chr11:105795017-105805461	11 E1	RSQ	Mm.149403	NM_007805	1	1	13056	RP23-186E14.2	  Cyb561	cytochrome b-561 (Cyb561), mRNA.			cytoplasmic vesicle;; electron transport chain;; ferric-chelate reductase activity;; integral to membrane;; iron ion binding;; membrane;; metal ion binding;; transport	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; vesicle	binding;; catalytic activity	ion binding;; oxidoreductase activity	cellular process;; establishment of localization;; localization;; metabolic process	cellular metabolic process;; establishment of localization;; oxidation reduction;; transport
790.1379	761.1454	707.5964	394.9297	388.4751	307.5240	0.0056890275	1.05770	9.55492	8.49723	1328952	1417508_at	15	chr15:36169777-36170226	15 B3.1	chr15:36169688-36212902	15 B3.1	RSQ	Mm.5181	NM_013923	1	1	30945		  Rnf19a	ring finger protein 19A (Rnf19a), mRNA.			integral to membrane;; ligase activity;; membrane;; metal ion binding;; modification-dependent protein catabolic process;; protein binding;; zinc ion binding	cell;; cell part	cell part;; membrane;; membrane part	binding;; catalytic activity	ion binding;; ligase activity;; protein binding	cellular process;; metabolic process	catabolic process;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
314.4891	309.5207	313.0997	102.5551	97.6477	99.7492	3.5002267e-05	1.64374	8.28708	6.64333	1329035	1417602_at	1 C5	chr1:93312699-93313101	1 D			UG5	Mm.218141				18627		  Per2	Period homolog 2 (Drosophila) (Per2), mRNA		Circadian rhythm - mammal CLASS Cellular Processes; Behavior; Circadian rhythm - mammal [PATH:mmu04710]	circadian rhythm;; cytoplasm;; negative regulation of specific transcription from RNA polymerase II promoter;; nucleus;; protein binding;; regulation of transcription, DNA-dependent;; rhythmic process;; signal transducer activity;; signal transduction;; transcription	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; metabolic process;; negative regulation of biological process;; regulation of biological process;; rhythmic process	biosynthetic process;; cell communication;; cellular metabolic process;; circadian rhythm;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
136.6527	142.6062	132.5847	45.3365	61.4561	64.2081	0.012388073	1.28409	7.10034	5.81626	1329204	1417821_at	17 B1|17 19.0 cM	chr17:35134509-35134926	17 B1			UG5	Mm.22506				110956		  D17H6S56E-5	DNA segment, Chr 17, human D6S56E 5, mRNA (cDNA clone MGC:28170 IMAGE:3985942)			viral envelope	virion;; virion part	viral envelope;; virion part				
237.5964	232.3563	231.2765	99.3466	112.8484	122.2624	0.0057884995	1.07319	7.86868	6.79549	1329205	1417822_at	17 B1|17 19.0 cM	chr17:35133679-35134254	17 B1			UGA	Mm.22506				110956		  D17H6S56E-5	DNA segment, Chr 17, human D6S56E 5, mRNA (cDNA clone MGC:28170 IMAGE:3985942)			viral envelope	virion;; virion part	viral envelope;; virion part				
246.7763	268.5551	233.2480	120.0337	121.7201	127.7511	0.00080804409	1.01665	7.96062	6.94397	1329298	1417929_at	14	chr14:55341124-55341626	14 C3	chr14:55341051-55400723	14 C3	RSQ	Mm.276831	NM_016972	1	1	50934		  Slc7a8	solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 (Slc7a8), mRNA.			amine transmembrane transporter activity;; amino acid transmembrane transporter activity;; amino acid transport;; cytoplasm;; integral to membrane;; L-amino acid transmembrane transporter activity;; L-amino acid transport;; membrane;; plasma membrane;; transport	cell;; cell part	cell part;; intracellular;; intracellular part;; membrane;; membrane part	transporter activity	substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization	establishment of localization;; transmembrane transport;; transport
865.7190	894.0942	1034.7201	211.8966	166.6975	169.8951	0.00013282566	2.35342	9.85902	7.50560	1329299	1417930_at	10 70.0 cM	chr10:127098035-127098540	10 D3	chr10:127097973-127103759	10 D3	RSQ	Mm.336898	NM_001122895	2	1	17937		  Nab2	Ngfi-A binding protein 2 (Nab2), transcript variant 2, mRNA.			endochondral ossification;; myelination;; negative regulation of transcription;; nucleus;; regulation of epidermis development;; regulation of transcription;; regulation of transcription, DNA-dependent;; Schwann cell differentiation;; transcription;; transcription regulator activity;; transcription repressor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	transcription regulator activity	transcription repressor activity	biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cellular developmental process;; cellular homeostasis;; cellular metabolic process;; ensheathment of neurons;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; ossification;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; system process
424.5262	392.7871	384.7675	201.4742	199.2366	175.0066	0.00039123421	1.06370	8.64505	7.58135	1343611	1418094_s_at	11	chr11:84778338-84779387	11 C	chr11:84771255-84779556	11 C	RSQ	Mm.1641	NM_007607	1	1	12351	RP23-167D6.1	  Car4	carbonic anhydrase 4 (Car4), mRNA.		Nitrogen metabolism CLASS Metabolism; Energy Metabolism; Nitrogen metabolism [PATH:mmu00910]	anchored to membrane;; carbonate dehydratase activity;; lyase activity;; membrane;; metal ion binding;; one-carbon metabolic process;; plasma membrane;; zinc ion binding	cell;; cell part	cell part;; membrane;; membrane part	binding;; catalytic activity	ion binding;; lyase activity	cellular process;; metabolic process	cellular metabolic process
1616.0867	1573.0423	1580.4144	192.9692	173.9628	200.9535	0.00026031051	3.07271	10.63457	7.56186	1329642	1418349_at	18 15.0 cM	chr18:36664709-36665151	18 B2	chr18:36664585-36675428	18 B2	RSQ	Mm.289681	NM_010415	1	1	15200		  Hbegf	heparin-binding EGF-like growth factor (Hbegf), mRNA.	NFAT and Hypertrophy of the heart (Transcription in the broken heart)	ErbB signaling pathway;; GnRH signaling pathway CLASS Environmental Information Processing; Signal Transduction; ErbB signaling pathway [PATH:mmu04012] Cellular Processes; Endocrine System; GnRH signaling pathway [PATH:mmu04912]	epidermal growth factor receptor signaling pathway;; extracellular region;; integral to membrane;; membrane;; plasma membrane;; regulation of heart contraction	cell;; cell part;; extracellular region	cell part;; membrane;; membrane part			biological regulation;; cellular process;; multicellular organismal process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process;; regulation of multicellular organismal process;; system process
4203.5671	4298.9217	4240.6475	314.8332	306.3186	352.1650	0.00020409707	3.71326	12.05241	8.33915	1329643	1418350_at	18 15.0 cM	chr18:36665688-36667226	18 B2	chr18:36664585-36675428	18 B2	RSQ	Mm.289681	NM_010415	1	1	15200		  Hbegf	heparin-binding EGF-like growth factor (Hbegf), mRNA.	NFAT and Hypertrophy of the heart (Transcription in the broken heart)	ErbB signaling pathway;; GnRH signaling pathway CLASS Environmental Information Processing; Signal Transduction; ErbB signaling pathway [PATH:mmu04012] Cellular Processes; Endocrine System; GnRH signaling pathway [PATH:mmu04912]	epidermal growth factor receptor signaling pathway;; extracellular region;; integral to membrane;; membrane;; plasma membrane;; regulation of heart contraction	cell;; cell part;; extracellular region	cell part;; membrane;; membrane part			biological regulation;; cellular process;; multicellular organismal process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process;; regulation of multicellular organismal process;; system process
1326.8609	1329.9098	1361.3830	700.4529	722.3739	525.4104	0.018028408	1.05857	10.38726	9.32868	1329711	1418432_at	1	chr1:87746036-87746518	1 C5	chr1:87690021-87748152	1 C5	RSQ	Mm.26135	NM_133781	1	1	12283		  Cab39	calcium binding protein 39 (Cab39), mRNA.		mTOR signaling pathway CLASS Environmental Information Processing; Signal Transduction; mTOR signaling pathway [PATH:mmu04150]	calcium ion binding;; cytoplasm	cell;; cell part	cell part;; intracellular;; intracellular part	binding	ion binding		
1804.0255	1845.1241	1839.5408	435.9297	753.0758	824.2191	0.034586344	1.50005	10.83721	9.33716	1329744	1418469_at	16 C3.1	chr16:76290241-76290637	16 C3.1			UGA	Mm.455873				268903		  Nrip1	Receptor interacting protein 140			histone deacetylase binding;; histone deacetylase complex;; lipid storage;; negative regulation of transcription from RNA polymerase II promoter;; nucleus;; ovarian follicle rupture;; ovulation;; protein binding;; receptor activity;; receptor binding;; regulation of transcription, DNA-dependent;; retinoid X receptor binding;; transcription;; transcription corepressor activity	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; molecular transducer activity;; transcription regulator activity	protein binding;; signal transducer activity;; transcription cofactor activity;; transcription repressor activity	biological regulation;; cellular process;; developmental process;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; rhythmic process	anatomical structure development;; biosynthetic process;; cellular metabolic process;; gamete generation;; macromolecule localization;; macromolecule metabolic process;; multicellular organism reproduction;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; ovulation cycle;; ovulation cycle process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; reproductive developmental process;; reproductive process;; reproductive process in a multicellular organism;; sexual reproduction
248.9299	268.4852	246.2027	134.6512	73.0052	94.5830	0.030192901	1.38183	7.99067	6.60884	1343687	1418507_s_at	10 C2|10 52.0 cM	chr10:94874243-94874582	10 C2			UGA	Mm.474283				216233		  Socs2	Suppressor of cytokine signaling 2 (Socs2), mRNA		Insulin signaling pathway;; Jak-STAT signaling pathway;; Type II diabetes mellitus CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910] Human Diseases; Metabolic Disorders; Type II diabetes mellitus [PATH:mmu04930]	growth hormone receptor binding;; intracellular signaling cascade;; lactation;; lactation;; mammary gland alveolus development;; mammary gland alveolus development;; modification-dependent protein catabolic process;; negative regulation of JAK-STAT cascade;; negative regulation of multicellular organism growth;; negative regulation of multicellular organism growth;; negative regulation of signal transduction;; positive regulation of neuron differentiation;; regulation of growth;; regulation of multicellular organism growth			binding	protein binding	biological regulation;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; catabolic process;; cell communication;; cellular developmental process;; cellular metabolic process;; macromolecule metabolic process;; multicellular organism growth;; multicellular organism reproduction;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of growth;; negative regulation of multicellular organismal process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of growth;; regulation of multicellular organismal process;; reproductive process;; reproductive process in a multicellular organism
391.4507	383.9652	370.3980	191.5080	186.8575	143.5187	0.011359553	1.14610	8.57682	7.43072	1329812	1418561_at	1 28.9 cM	chr1:55042033-55042501	1 C1.2	chr1:55042012-55084322	1 C1.2	RSQ	Mm.279736	NM_031179	1	1	81898		  Sf3b1	splicing factor 3b, subunit 1 (Sf3b1), mRNA.			anterior/posterior pattern formation;; binding;; chromatin binding;; mRNA processing;; nuclear mRNA splicing, via spliceosome;; nucleus;; protein binding;; RNA splicing;; RNA splicing factor activity, transesterification mechanism;; spliceosomal complex	cell;; cell part;; macromolecular complex;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle part;; ribonucleoprotein complex	binding;; catalytic activity	chromatin binding;; protein binding;; RNA splicing factor activity, transesterification mechanism	cellular process;; developmental process;; metabolic process;; multicellular organismal process	cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; pattern specification process;; primary metabolic process
4364.5741	4422.7925	4415.6374	1240.1825	1600.6565	1290.1840	0.0044841721	1.68554	12.10359	10.41805	1329818	1418571_at	17	chr17:23812771-23812982	17 A3.3	chr17:23812411-23814416	17 A3.3	RSQ		NM_001161746	2	1	27279		  Tnfrsf12a	tumor necrosis factor receptor superfamily, member 12a (Tnfrsf12a), transcript variant 2, mRNA.		Cytokine-cytokine receptor interaction CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060]	angiogenesis;; apoptosis;; cell adhesion;; cell death;; cell differentiation;; cell surface;; integral to membrane;; membrane;; multicellular organismal development;; plasma membrane;; positive regulation of axon extension;; protein binding;; receptor activity;; ruffle;; substrate-bound cell migration, cell attachment to substrate	cell;; cell part	cell leading edge;; cell part;; cell projection;; cell surface;; membrane;; membrane part	binding;; molecular transducer activity	protein binding;; signal transducer activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; localization;; locomotion;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; cell death;; cell motility;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; localization of cell;; multicellular organismal development;; positive regulation of biological process;; positive regulation of cellular component organization;; positive regulation of cellular process;; positive regulation of developmental process;; regulation of biological process;; regulation of cellular component organization;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process
3940.8133	4157.4390	4121.4174	1005.5524	1363.7326	1130.8393	0.0038825844	1.81480	11.99156	10.17677	1343706	1418572_x_at	17	chr17:23812771-23812982	17 A3.3	chr17:23812411-23814416	17 A3.3	RSQ		NM_001161746	2	1	27279		  Tnfrsf12a	tumor necrosis factor receptor superfamily, member 12a (Tnfrsf12a), transcript variant 2, mRNA.		Cytokine-cytokine receptor interaction CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060]	angiogenesis;; apoptosis;; cell adhesion;; cell death;; cell differentiation;; cell surface;; integral to membrane;; membrane;; multicellular organismal development;; plasma membrane;; positive regulation of axon extension;; protein binding;; receptor activity;; ruffle;; substrate-bound cell migration, cell attachment to substrate	cell;; cell part	cell leading edge;; cell part;; cell projection;; cell surface;; membrane;; membrane part	binding;; molecular transducer activity	protein binding;; signal transducer activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; localization;; locomotion;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; cell death;; cell motility;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; localization of cell;; multicellular organismal development;; positive regulation of biological process;; positive regulation of cellular component organization;; positive regulation of cellular process;; positive regulation of developmental process;; regulation of biological process;; regulation of cellular component organization;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process
551.4382	590.7990	561.2075	204.8350	209.3547	194.5793	4.3928093e-06	1.48454	9.14866	7.66411	1329909	1418674_at	15 4.6 cM	chr15:6763697-6764043	15 A1	chr15:6763576-6824313	15 A1	RSQ	Mm.10760	NM_011019	1	1	18414		  Osmr	oncostatin M receptor (Osmr), mRNA.		Cytokine-cytokine receptor interaction;; Jak-STAT signaling pathway CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060]	cell surface receptor linked signal transduction;; cytokine receptor activity;; integral to membrane;; integral to plasma membrane;; membrane;; oncostatin-M receptor activity;; receptor activity	cell;; cell part	cell part;; membrane;; membrane part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
1271.6748	1202.1519	1217.2630	345.4227	341.6724	237.5361	0.0068075784	2.01755	10.26445	8.24690	1330049	1418835_at	10	chr10:110945144-110945563	10 D1	chr10:110943341-110945705	10 D1	RSQ	Mm.3117	NM_009344	1	1	21664		  Phlda1	pleckstrin homology-like domain, family A, member 1 (Phlda1), mRNA.			apoptosis;; cytoplasm;; cytoplasmic vesicle;; FasL biosynthetic process;; membrane;; nucleus	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane-bounded organelle;; vesicle			cellular process;; death;; metabolic process	biosynthetic process;; cell death;; cellular metabolic process;; macromolecule metabolic process
5100.3858	5050.0920	5082.7644	2796.1651	2683.5834	2146.5024	0.013467617	1.00764	12.30996	11.30232	1330097	1418901_at	2 95.5 cM	chr2:167515579-167515878	2 H3	chr2:167514414-167515918	2 H3	RSQ	Mm.439656	NM_009883	1	1	12608	RP24-151H6.1	  Cebpb	CCAAT/enhancer binding protein (C/EBP), beta (Cebpb), mRNA.	IL 6 signaling pathway		anti-apoptosis;; cytoplasm;; DNA binding;; embryonic placenta development;; fat cell differentiation;; induction of apoptosis;; mammary gland epithelial cell differentiation;; mammary gland epithelial cell proliferation;; neuron differentiation;; nucleus;; positive regulation of transcription;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; protein dimerization activity;; protein heterodimerization activity;; protein homodimerization activity;; regulation of interleukin-6 biosynthetic process;; regulation of transcription, DNA-dependent;; RNA polymerase II transcription factor activity, enhancer binding;; sequence-specific DNA binding;; transcription;; transcription activator activity;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; RNA polymerase II transcription factor activity;; transcription activator activity;; transcription factor activity	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell death;; cell proliferation;; cellular developmental process;; cellular metabolic process;; cytokine production;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process
1466.3991	1503.8276	1546.8469	658.2704	845.0681	552.6684	0.021407176	1.15729	10.55587	9.39858	1330123	1418932_at	13 32.0 cM	chr13:53062781-53063171	13 B1	chr13:53062577-53076408	13 B1	RSQ	Mm.136604	NM_017373	2	2	18030		  Nfil3	nuclear factor, interleukin 3, regulated (Nfil3), mRNA.			DNA binding;; nucleus;; protein dimerization activity;; regulation of transcription, DNA-dependent;; rhythmic process;; sequence-specific DNA binding;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process;; rhythmic process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
457.4114	434.6008	431.5846	174.8988	260.6096	214.0515	0.022067362	1.04549	8.78480	7.73931	1330208	1419034_at	2	chr2:152104805-152104961	2 G3	chr2:152052575-152107588	2 G3	RSQ	Mm.23692	NM_007788	2	2	12995	RP23-452D3.3	  Csnk2a1	casein kinase 2, alpha 1 polypeptide (Csnk2a1), mRNA.	EGF Signaling Pathway;; EPO Signaling Pathway;; IGF-1 Signaling Pathway;; IL 2 signaling pathway;; IL 6 signaling pathway;; Insulin Signaling Pathway;; Lissencephaly gene (LIS1) in neuronal migration and development;; Nerve growth factor pathway (NGF);; PDGF Signaling Pathway;; TPO Signaling Pathway;; WNT Signaling Pathway	Adherens junction;; Tight junction CLASS Environmental Information Processing; Signal Transduction; Wnt signaling pathway [PATH:mmu04310] Cellular Processes; Cell Communication; Adherens junction [PATH:mmu04520] Cellular Processes; Cell Communication; Tight junction [PATH:mmu04530];; Wnt signaling pathway	ATP binding;; beta-catenin binding;; kinase activity;; nucleotide binding;; protein amino acid autophosphorylation;; protein amino acid phosphorylation;; protein binding;; protein kinase activity;; protein kinase CK2 complex;; protein phosphatase regulator activity;; protein serine/threonine kinase activity;; transferase activity;; Wnt receptor signaling pathway	cell;; cell part;; macromolecular complex	cell part;; intracellular;; intracellular part;; protein complex	binding;; catalytic activity;; enzyme regulator activity	nucleoside binding;; nucleotide binding;; phosphatase regulator activity;; protein binding;; transferase activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	cell communication;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process
262.5408	240.0964	218.9852	98.9287	82.4758	114.1714	0.0030702464	1.29643	7.90619	6.60976	1330303	1419149_at	5	chr5:137537541-137537908	5 G2	chr5:137537373-137548142	5 G2	RSQ	Mm.250422	NM_008871	1	1	18787		  Serpine1	serine (or cysteine) peptidase inhibitor, clade E, member 1 (Serpine1), mRNA.	Fibrinolysis Pathway;; Platelet Amyloid Precursor Protein Pathway	Complement and coagulation cascades CLASS Cellular Processes; Cell Growth and Death; p53 signaling pathway [PATH:mmu04115] Cellular Processes; Immune System; Complement and coagulation cascades [PATH:mmu04610];; p53 signaling pathway	endopeptidase inhibitor activity;; extracellular region;; protein binding;; regulation of angiogenesis;; regulation of cell proliferation;; serine-type endopeptidase activity;; serine-type endopeptidase inhibitor activity	extracellular region		binding;; catalytic activity;; enzyme regulator activity	enzyme inhibitor activity;; hydrolase activity;; protein binding	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell proliferation;; multicellular organismal development;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process
520.0314	523.7359	517.9739	232.8869	241.2085	271.0628	0.003661152	1.07059	9.02396	7.95337	1330344	1419203_at	11	chr11:60734486-60734979	11 B2	chr11:60734442-60745369	11 B2	RSQ		NR_027800	1	1	24082		  Gtlf3a	gene trap locus F3a (Gtlf3a), non-coding RNA.									
117.4738	134.3279	122.2501	58.7293	59.4489	58.7069	0.0025817066	1.07815	6.95983	5.88168	1330348	1419208_at	18 0.0 cM	chr18:4331546-4331913	18 A1	chr18:4331324-4352951	18 A1	RSQ	Mm.3275	NM_007746	1	1	26410		  Map3k8	mitogen-activated protein kinase kinase kinase 8 (Map3k8), mRNA.	MAPKinase Signaling Pathway	MAPK signaling pathway;; T cell receptor signaling pathway CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Cellular Processes; Immune System; Toll-like receptor signaling pathway [PATH:mmu04620] Cellular Processes; Immune System; T cell receptor signaling pathway [PATH:mmu04660];; Toll-like receptor signaling pathway	ATP binding;; cell cycle;; cytoplasm;; kinase activity;; magnesium ion binding;; MAP kinase kinase kinase activity;; metal ion binding;; nucleotide binding;; protein amino acid phosphorylation;; protein binding;; protein kinase activity;; protein serine/threonine kinase activity;; signal transduction;; transferase activity	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; catalytic activity;; molecular transducer activity	ion binding;; nucleoside binding;; nucleotide binding;; protein binding;; signal transducer activity;; transferase activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	cell communication;; cell cycle;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process
48.8764	55.4908	63.7484	21.5839	20.7693	22.9311	0.0028945968	1.35735	5.79985	4.44250	1330349	1419209_at	5 51.0 cM	chr5:91321568-91321979	5 E1	chr5:91320270-91322147	5 E1	RSQ	Mm.21013	NM_008176	1	1	14825		  Cxcl1	chemokine (C-X-C motif) ligand 1 (Cxcl1), mRNA.		Chemokine signaling pathway CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060] Cellular Processes; Immune System; Chemokine signaling pathway [PATH:mmu04062];; Cytokine-cytokine receptor interaction	chemokine activity;; cytokine activity;; extracellular region;; extracellular space;; growth factor activity;; immune response;; inflammatory response	extracellular region;; extracellular region part	extracellular region part;; extracellular space	binding	protein binding	immune system process;; response to stimulus	immune response;; response to external stimulus;; response to stress
7353.9914	7360.2075	7427.3301	1067.1625	1922.5705	1670.4169	0.012238767	2.29136	12.84949	10.55813	1330359	1419220_at	9 F4	chr9:119923004-119923392	9 F4			UGA	Mm.10117				22437		  Xirp1	Xin			actin binding;; actin cytoskeleton organization;; cardiac muscle cell development;; cell junction;; cell-cell adherens junction;; fascia adherens;; filamin-C binding;; heart morphogenesis;; intercalated disc;; negative regulation of cell proliferation;; protein binding;; regulation of membrane potential;; sarcomere organization	cell;; cell part	cell part;; membrane;; membrane part	binding	protein binding	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process	actin filament-based process;; anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell proliferation;; cellular component assembly;; cellular component morphogenesis;; cellular developmental process;; cellular homeostasis;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; organelle organization;; regulation of biological process;; regulation of biological quality;; regulation of cellular process
556.0256	580.7698	583.7638	238.1519	247.4853	351.9975	0.025894344	1.06124	9.16336	8.10212	1330384	1419255_at	11 13.0 cM	chr11:30007644-30008198	11 A3.3	chr11:30006842-30098257	11 A3.3	RSQ	Mm.123110	NM_009260	1	1	20742	RP23-189P1.1	  Spnb2	spectrin beta 2 (Spnb2), transcript variant 2, mRNA.		Tight junction CLASS Cellular Processes; Cell Communication; Tight junction [PATH:mmu04530]	actin binding;; actin filament capping;; calmodulin binding;; common-partner SMAD protein phosphorylation;; cortical cytoskeleton;; cytoplasm;; cytoskeleton;; membrane;; nucleus;; plasma membrane;; protein binding;; SMAD protein nuclear translocation;; spectrin;; structural constituent of cytoskeleton	cell;; cell part;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part	binding;; structural molecule activity	protein binding;; structural constituent of cytoskeleton	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; establishment of localization;; localization;; metabolic process;; negative regulation of biological process;; regulation of biological process	actin filament-based process;; cell communication;; cellular component assembly;; cellular component disassembly;; cellular localization;; cellular macromolecular complex subunit organization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; establishment of protein localization;; macromolecular complex subunit organization;; macromolecule localization;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular component organization;; negative regulation of cellular process;; negative regulation of metabolic process;; organelle organization;; primary metabolic process;; protein complex biogenesis;; regulation of biological process;; regulation of biological quality;; regulation of cellular component biogenesis;; regulation of cellular component organization;; regulation of cellular process;; regulation of metabolic process;; transport
1425.9557	1448.8141	1350.6612	440.3720	655.3326	685.5480	0.022428861	1.27268	10.45927	9.18659	1330421	1419301_at	7 44.5 cM	chr7:96557344-96557739	7 E1	chr7:96552875-96558620	7 E1	RSQ	Mm.86755	NM_008055	1	1	14366		  Fzd4	frizzled homolog 4 (Drosophila) (Fzd4), mRNA.		Basal cell carcinoma CLASS Environmental Information Processing; Signal Transduction; Wnt signaling pathway [PATH:mmu04310] Cellular Processes; Endocrine System; Melanogenesis [PATH:mmu04916] Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Colorectal cancer [PATH:mmu05210] Human Diseases; Cancers; Basal cell carcinom;; Colorectal cancer;; Melanogenesis;; Pathways in cancer;; Wnt signaling pathway	cell surface receptor linked signal transduction;; G-protein coupled receptor activity;; G-protein coupled receptor protein signaling pathway;; integral to membrane;; membrane;; multicellular organismal development;; non-G-protein coupled 7TM receptor activity;; protein binding;; receptor activity;; signal transducer activity;; signal transduction;; transmembrane receptor activity;; Wnt receptor signaling pathway	cell;; cell part	cell part;; membrane;; membrane part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; developmental process;; multicellular organismal process;; regulation of biological process	cell communication;; multicellular organismal development;; regulation of biological process;; regulation of cellular process
853.5776	866.5564	826.1962	284.0782	330.2943	363.1650	0.0042311131	1.38821	9.72896	8.34074	1330481	1419376_at	2	chr2:110201583-110202080	2 E3	chr2:110201081-110203150	2 E3	RSQ	Mm.291809	NM_026271	1	1	67606	RP23-110I8.1	  Fibin	fin bud initiation factor homolog (zebrafish) (Fibin), mRNA.			extracellular region;; Golgi apparatus	cell;; cell part;; extracellular region;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle				
296.1956	264.9176	258.2057	61.7332	50.4948	41.1376	0.0020670409	2.43459	8.09073	5.65614	1343853	1419394_s_at	3 43.6 cM	chr3:90473446-90473926	3 F1	chr3:90472992-90473956	3 F1	RSQ	Mm.21567	NM_013650	1	1	20201		  S100a8	S100 calcium binding protein A8 (calgranulin A) (S100a8), mRNA.			calcium ion binding;; chemotaxis			binding	ion binding	locomotion;; response to stimulus	behavior;; response to chemical stimulus;; response to external stimulus;; taxis
324.7642	284.0103	305.6715	122.6283	144.5561	145.9770	0.00060598368	1.14855	8.24963	7.10108	1330502	1419405_at	7	chr7:88047145-88049749	7 D3	chr7:88047121-88049922	7 D3	RSQ	Mm.22246	NM_026523	1	1	68039		  Nmb	neuromedin B (Nmb), mRNA.			extracellular region;; neuropeptide signaling pathway	extracellular region				biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
239.2075	268.7490	250.1674	117.1287	114.0538	108.5997	0.00011401705	1.15686	7.97966	6.82280	1330567	1419488_at	5	chr5:34839136-34839321	5 B2	chr5:34838744-34856628	5 B2	RSQ	Mm.28615	NM_139064	1	1	231130		  Tnip2	TNFAIP3 interacting protein 2 (Tnip2), mRNA.			cytoplasm;; I-kappaB kinase/NF-kappaB cascade;; protein binding	cell;; cell part	cell part;; intracellular;; intracellular part	binding	protein binding	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
860.3207	807.8935	832.0106	450.4418	319.0856	369.4181	0.013183251	1.14837	9.70240	8.55404	1343904	1419647_a_at	17	chr17:35959305-35959827	17 B1	chr17:35958657-35959856	17 B1	RSQ	Mm.25613	NM_133662	1	1	15937		  Ier3	immediate early response 3 (Ier3), mRNA.			integral to membrane;; membrane	cell;; cell part	cell part;; membrane;; membrane part				
214.5170	225.2440	192.5408	79.0585	64.8317	79.5374	0.00042654615	1.50409	7.71644	6.21235	1343918	1419700_a_at	5	chr5:44384916-44385436	5 B3	chr5:44384860-44492920	5 B3	RSQ	Mm.6250	NM_008935	1	1	19126		  Prom1	prominin 1 (Prom1), mRNA.			apical plasma membrane;; brush border;; cell projection;; cell surface;; extracellular space;; integral to membrane;; integral to plasma membrane;; membrane;; microvillus;; plasma membrane;; stereocilium	cell;; cell part;; extracellular region;; extracellular region part;; organelle;; organelle part	apical part of cell;; cell part;; cell projection;; cell surface;; extracellular region part;; extracellular space;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; non-membrane-bounded organelle;; organelle part;; stereocilium				
656.2367	613.0088	603.6055	273.7075	281.2495	328.5653	0.0017396608	1.08769	9.28510	8.19741	1343936	1419816_s_at	4	chr4:150241573-150241791	4 E2	chr4:150229199-150242989	4 E2	RSQ	Mm.318841	NM_133753	1	1	74155	RP23-272N19.4	  Errfi1	ERBB receptor feedback inhibitor 1 (Errfi1), mRNA.			cytoplasm;; cytosol;; protein binding;; receptor activity;; stress-activated protein kinase signaling pathway	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; regulation of biological process;; response to stimulus	cell communication;; cellular response to stimulus;; regulation of biological process;; regulation of cellular process;; response to stress
857.6481	875.9306	893.0172	368.9323	424.3230	309.3892	0.0097962752	1.26398	9.77382	8.50984	1343955	1419874_x_at	9					UGA	Mm.34106						  	Transcribed locus, strongly similar to NP_001028496.1 zinc finger and BTB domain containing 16 [Mus musculus]									
808.2145	838.3654	811.4856	291.5900	302.8741	305.0928	9.6337626e-07	1.45033	9.67815	8.22783	1343970	1419927_s_at	1	chr1:136403861-136404136	1 E4	chr1:136391236-136404462	1 E4	RSQ	Mm.198119	NM_145510	1	1	98710		  Rabif	RAB interacting factor (Rabif), mRNA.			guanyl-nucleotide exchange factor activity;; metal ion binding;; protein transport;; small GTPase mediated signal transduction;; transport;; zinc ion binding			binding;; enzyme regulator activity	ion binding;; nucleoside-triphosphatase regulator activity	biological regulation;; cellular process;; establishment of localization;; localization;; regulation of biological process	cell communication;; establishment of localization;; establishment of protein localization;; macromolecule localization;; regulation of biological process;; regulation of cellular process;; transport
751.6519	678.1258	612.2388	158.8062	92.2823	91.5046	0.0057342101	2.62080	9.40576	6.78496	1331270	1420558_at	1 86.6 cM	chr1:166079630-166080083	1 H2.2	chr1:166053831-166079876	1 H2.2	RSQ	Mm.3337	NM_011347	1	1	20344		  Selp	selectin, platelet (Selp), mRNA.	Eph Kinases and ephrins support platelet aggregation;; Monocyte and its Surface Molecules	Cell adhesion molecules (CAMs) CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cell adhesion molecules (CAMs) [PATH:mmu04514]	binding;; calcium-dependent protein binding;; cell adhesion;; external side of plasma membrane;; glycoprotein binding;; heterophilic cell adhesion;; inflammatory response;; integral to membrane;; leukocyte adhesion;; leukocyte tethering or rolling;; membrane;; membrane fraction;; platelet alpha granule membrane;; protein binding;; sialic acid binding;; sugar binding	cell;; cell part;; organelle;; organelle part	cell fraction;; cell part;; cell surface;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part;; vesicle	binding	carbohydrate binding;; protein binding	biological adhesion;; cellular process;; immune system process;; localization;; locomotion;; response to stimulus	cell adhesion;; cell motility;; cell motion;; leukocyte migration;; localization of cell;; response to external stimulus;; response to stress
413.1140	357.2566	339.3122	145.5516	161.9720	175.9615	0.00051237062	1.19786	8.52589	7.32803	1331285	1420575_at	8 45.0 cM	chr8:96676690-96677865	8 C5	chr8:96676643-96678031	8 C5	RSQ	Mm.2064	NM_013603	1	1	17751		  Mt3	metallothionein 3 (Mt3), mRNA.			cellular metal ion homeostasis;; copper ion binding;; metal ion binding;; negative regulation of neurogenesis;; synaptic vesicle;; zinc ion binding	cell;; cell part;; organelle;; synapse;; synapse part	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle;; synapse part;; synaptic vesicle;; vesicle	binding	ion binding	biological regulation;; cellular process;; developmental process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process	anatomical structure development;; cellular developmental process;; cellular homeostasis;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process
86.4955	85.0225	89.6762	40.2297	45.4187	43.7427	0.00063447931	1.01487	6.44366	5.42879	1331346	1420667_at	11	chr11:75582506-75583066	11 B5	chr11:75582591-75609559	11 B5	RSQ	Mm.5137	NM_007873	1	1	13447	RP23-78H4.2	  Doc2b	double C2, beta (Doc2b), mRNA.			calcium ion binding;; calcium-dependent phospholipid binding;; membrane;; synaptic vesicle;; transport;; transporter activity	cell;; cell part;; organelle;; synapse;; synapse part	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane-bounded organelle;; synapse part;; synaptic vesicle;; vesicle	binding;; transporter activity	ion binding;; lipid binding	establishment of localization;; localization	establishment of localization;; transport
695.1276	690.1875	692.9852	289.5110	253.5276	313.0794	0.0047084115	1.28493	9.43622	8.15129	1331467	1420836_at	14 D2	chr14:76161375-76161441	14 D3			UGA	Mm.46067				67554		  Slc25a30	Solute carrier family 25, member 30, mRNA (cDNA clone MGC:31367 IMAGE:4238839)			binding;; integral to membrane;; membrane;; mitochondrial inner membrane;; mitochondrion;; transport;; transporter activity	cell;; cell part;; envelope;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle envelope;; organelle membrane;; organelle part	binding;; transporter activity		establishment of localization;; localization	establishment of localization;; transport
1973.5586	1927.1863	1967.2630	284.3779	173.0591	137.4432	0.0082673731	3.37045	10.93361	7.56316	1331591	1420991_at	19	chr19:36187159-36191361	19 C2	chr19:36186454-36194334	19 C2	RSQ	Mm.10279	NM_013468	1	1	107765		  Ankrd1	ankyrin repeat domain 1 (cardiac muscle) (Ankrd1), mRNA.			cytoplasm;; I band;; nucleus;; protein binding;; regulation of transcription from RNA polymerase II promoter;; transcription corepressor activity;; transcription factor complex	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	protein binding;; transcription cofactor activity;; transcription repressor activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
1537.9415	1602.5127	1537.0619	182.5408	134.9352	92.3970	0.0060880467	3.56696	10.60629	7.03932	1331592	1420992_at	19	chr19:36186663-36186994	19 C2	chr19:36186454-36194334	19 C2	RSQ	Mm.10279	NM_013468	1	1	107765		  Ankrd1	ankyrin repeat domain 1 (cardiac muscle) (Ankrd1), mRNA.			cytoplasm;; I band;; nucleus;; protein binding;; regulation of transcription from RNA polymerase II promoter;; transcription corepressor activity;; transcription factor complex	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	protein binding;; transcription cofactor activity;; transcription repressor activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
727.8373	741.9241	745.0505	259.5930	295.1997	251.7090	0.0019270313	1.46084	9.52793	8.06709	1344415	1421679_a_at	17 15.23 cM	chr17:29235417-29235782	17 A3.3	chr17:29230716-29237667	17 A3.3	RSQ	Mm.477981	NM_007669	2	1	12575		  Cdkn1a	cyclin-dependent kinase inhibitor 1A (P21) (Cdkn1a), transcript variant 1, mRNA.	ATM Signaling Pathway;; Cell Cycle: G1/S Check Point;; Cell Cycle: G2/M Checkpoint;; Cyclins and Cell Cycle Regulation;; Effects of calcineurin in Keratinocyte Differentiation;; Erythropoietin mediated neuroprotection through NF-kB;; Influence of Ras and Rho proteins on G1 to S Transition;; p53 Signaling Pathway	Bladder cancer;; Cell cycle;; Chronic myeloid leukemia CLASS Environmental Information Processing; Signal Transduction; ErbB signaling pathway [PATH:mmu04012] Cellular Processes; Cell Growth and Death; Cell cycle [PATH:mmu04110] Cellular Processes; Cell Growth and Death; p53 signaling pathway [PATH:mmu04115] Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases;;; ErbB signaling pathway;; Glioma;; Melanoma;; p53 signaling pathway;; Pathways in cancer;; Prostate cancer	cell cycle;; cell cycle arrest;; cyclin binding;; cyclin-dependent protein kinase holoenzyme complex;; cyclin-dependent protein kinase inhibitor activity;; cytoplasm;; cytosol;; kinase activity;; metal ion binding;; negative regulation of apoptosis;; negative regulation of cell proliferation;; negative regulation of cyclin-dependent protein kinase activity;; nucleus;; positive regulation of B cell proliferation;; positive regulation of programmed cell death;; protein binding;; protein kinase inhibitor activity;; regulation of cell cycle;; response to DNA damage stimulus;; response to UV;; zinc ion binding	cell;; cell part;; macromolecular complex;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle;; protein complex	binding;; catalytic activity;; enzyme regulator activity	enzyme inhibitor activity;; ion binding;; kinase regulator activity;; protein binding;; transferase activity	biological regulation;; cellular process;; death;; developmental process;; immune system process;; metabolic process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	cell activation;; cell cycle;; cell cycle process;; cell death;; cell proliferation;; cellular metabolic process;; leukocyte activation;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of immune system process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of metabolic process;; regulation of molecular function;; response to abiotic stimulus;; response to stress
229.8900	222.1572	247.8473	114.2189	137.5723	91.0081	0.020052214	1.04864	7.86451	6.81588	1332171	1421811_at	2 F1-F3|2 65.0 cM	chr2:117952274-117952837	2 E5			UGA	Mm.4159				21825	RP23-234E8.1	  Thbs1	Thrombospondin 1 (Thbs1), mRNA	TSP-1 Induced Apoptosis in Microvascular Endothelial Cell	Bladder cancer CLASS Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350] Environmental Information Processing; Signaling Molecules and Interaction; ECM-receptor interaction [PATH:mmu04512] Cellular Processes; Cell Communication; Focal adhesion [PATH:mmu04510] Human Diseases; Cancers; Bladder cancer [PATH;; ECM-receptor interaction;; Focal adhesion;; p53 signaling pathway;; TGF-beta signaling pathway	calcium ion binding;; cell adhesion;; extracellular matrix binding;; extracellular region;; extracellular space;; heparin binding;; inflammatory response;; negative regulation of angiogenesis;; positive regulation of cell-substrate adhesion;; protein binding;; structural molecule activity	extracellular region;; extracellular region part	extracellular region part;; extracellular space	binding;; structural molecule activity	carbohydrate binding;; extracellular matrix binding;; ion binding;; pattern binding;; protein binding	anatomical structure formation;; biological adhesion;; biological regulation;; cellular process;; developmental process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; multicellular organismal development;; negative regulation of biological process;; negative regulation of developmental process;; positive regulation of biological process;; positive regulation of cellular process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process;; response to external stimulus;; response to stress
397.1650	417.6318	424.7516	161.7004	188.9437	150.3393	0.0030560901	1.31303	8.69005	7.37702	1332178	1421821_at	9 5.0 cM	chr9:21553593-21554081	9 A3	chr9:21528037-21554363	9 A3	RSQ	Mm.3213	NM_010700	1	1	16835		  Ldlr	low density lipoprotein receptor (Ldlr), mRNA.	FXR and LXR Regulation of Cholesterol Metabolism;; SREBP control of lipid synthesis	Endocytosis CLASS Cellular Processes; Transport and Catabolism; Endocytosis [PATH:mmu04144]	calcium ion binding;; cholesterol homeostasis;; cholesterol homeostasis;; cholesterol metabolic process;; cholesterol transport;; coated pit;; endocytosis;; endosome;; integral to membrane;; lipid metabolic process;; lipid transport;; lipoprotein catabolic process;; lipoprotein catabolic process;; lipoprotein metabolic process;; low-density lipoprotein binding;; low-density lipoprotein particle;; low-density lipoprotein receptor activity;; low-density lipoprotein receptor activity;; membrane;; protein binding;; receptor activity;; steroid metabolic process;; transport;; very-low-density lipoprotein receptor activity	cell;; cell part;; extracellular region;; extracellular region part;; macromolecular complex;; organelle	cell part;; endomembrane system;; extracellular region part;; extracellular space;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; plasma lipoprotein particle;; protein-lipid complex	binding;; molecular transducer activity	ion binding;; protein binding;; signal transducer activity	biological regulation;; cellular component organization;; cellular process;; establishment of localization;; localization;; metabolic process	alcohol metabolic process;; biosynthetic process;; catabolic process;; cellular metabolic process;; establishment of localization;; macromolecule metabolic process;; membrane organization;; primary metabolic process;; regulation of biological quality;; transport;; vesicle-mediated transport
677.5097	682.5045	642.6164	226.6614	325.1630	325.2075	0.01795718	1.21066	9.38220	8.17154	1344488	1421957_a_at	16 22.85 cM	chr16:32471767-32471880	16 B3	chr16:32451788-32472101	16 B3	RSQ	Mm.390903	NM_009981	1	1	13026		  Pcyt1a	phosphate cytidylyltransferase 1, choline, alpha isoform (Pcyt1a), mRNA.		Aminophosphonate metabolism;; Glycerophospholipid metabolism;; Metabolic pathways CLASS Metabolism; Lipid Metabolism; Glycerophospholipid metabolism [PATH:mmu00564] Metabolism; Metabolism of Other Amino Acids; Aminophosphonate metabolism [PATH:mmu00440]	biosynthetic process;; catalytic activity;; choline-phosphate cytidylyltransferase activity;; cytoplasm;; endoplasmic reticulum membrane;; glycogen granule;; membrane;; nucleotidyltransferase activity;; phosphatidylcholine biosynthetic process;; phosphatidylcholine biosynthetic process;; phospholipid biosynthetic process;; response to abiotic stimulus;; transferase activity	cell;; cell part;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	catalytic activity	transferase activity	cellular process;; metabolic process;; response to stimulus	alcohol metabolic process;; biosynthetic process;; cellular metabolic process;; nitrogen compound metabolic process;; organophosphate metabolic process;; primary metabolic process;; response to abiotic stimulus
63.4071	57.6838	47.4780	22.3499	25.1900	34.8383	0.014398681	1.04876	5.80195	4.75319	1332410	1422134_at	7 5.0 cM	chr7:19888336-19888846	7 A3	chr7:19888044-19895394	7 A3	RSQ	Mm.248335	NM_008036	1	1	14282		  Fosb	FBJ osteosarcoma oncogene B (Fosb), mRNA.	FOSB gene expression and drug abuse		DNA binding;; nucleus;; protein dimerization activity;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
2866.2196	2773.5150	2814.3290	1116.0755	1341.0477	1036.5357	0.0066597163	1.28336	11.46034	10.17697	1332654	1422473_at	4 C6|4 46.8 cM	chr4:102277892-102278309	4 C6			UG5	Mm.20181				18578	RP23-57D24.1	  Pde4b	Phosphodiesterase 4B, cAMP specific, mRNA (cDNA clone IMAGE:5354427)		Purine metabolism CLASS Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mmu00230]	3',5'-cyclic-AMP phosphodiesterase activity;; smooth muscle contraction			catalytic activity	hydrolase activity	multicellular organismal process	system process
17311.5408	17626.1305	17479.4058	1763.3971	2121.9924	1128.1347	0.006116709	3.43439	14.09275	10.65836	1344655	1422557_s_at	8 45.0 cM	chr8:96703191-96704176	8 C5	chr8:96702988-96704227	8 C5	RSQ	Mm.192991	NM_013602	1	1	17748		  Mt1	metallothionein 1 (Mt1), mRNA.			cellular metal ion homeostasis;; cellular zinc ion homeostasis;; copper ion binding;; cytosol;; detoxification of copper ion;; lysosome;; metal ion binding;; nitric oxide mediated signal transduction;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding	biological regulation;; cellular process;; regulation of biological process;; response to stimulus	cell communication;; cellular homeostasis;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; response to chemical stimulus
2728.9297	2861.6266	2879.3005	73.1061	89.8435	88.0124	0.00015515705	5.08245	11.46275	6.38030	1332723	1422562_at	8 D3	chr8:107152017-107152528	8 D3			UG5	Mm.29467				56437		  Rrad	Ras-related associated with diabetes (Rrad), mRNA			calmodulin binding;; GTP binding;; nucleotide binding;; small GTPase mediated signal transduction			binding	nucleotide binding;; protein binding	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
612.2141	626.3741	602.7570	298.5463	305.0408	290.0063	4.984057e-06	1.04320	9.26140	8.21820	1332733	1422573_at	7 52.0 cM	chr7:117955390-117955823	7 F1	chr7:117916117-117955909	7 F1	RSQ	Mm.3238	NM_009667	1	1	11717		  Ampd3	adenosine monophosphate deaminase 3 (Ampd3), mRNA.		Metabolic pathways CLASS Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mmu00230];; Purine metabolism	AMP deaminase activity;; deaminase activity;; hydrolase activity;; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines;; nucleotide metabolic process;; purine base metabolic process;; purine ribonucleoside monophosphate biosynthetic process			catalytic activity	deaminase activity;; hydrolase activity	cellular process;; metabolic process	biosynthetic process;; cellular metabolic process;; nitrogen compound metabolic process;; primary metabolic process
688.1540	727.5920	763.3859	261.3204	258.8752	314.1194	0.0010443655	1.38963	9.50328	8.11365	1332904	1422788_at	2	chr2:84798112-84798561	2 D	chr2:84776812-84798666	2 D	RSQ	Mm.290729	NM_021398	1	1	58207	RP23-232L15.1	  Slc43a3	solute carrier family 43, member 3 (Slc43a3), mRNA.			integral to membrane;; membrane	cell;; cell part	cell part;; membrane;; membrane part				
254.4957	249.7773	262.9522	45.4336	38.7496	33.1057	0.0018638421	2.72128	7.99822	5.27693	1332965	1422864_at	16 62.2 cM	chr16:92603923-92604494	16 C4	chr16:92601710-92826311	16 C4	RSQ	Mm.4081	NM_001111022	4	1	12394		  Runx1	runt related transcription factor 1 (Runx1), transcript variant 2, mRNA.		Acute myeloid leukemia CLASS Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Acute myeloid leukemia [PATH:mmu05221] Human Diseases; Cancers; Chronic myeloid leukemia [PATH:mmu05220];; Chronic myeloid leukemia;; Pathways in cancer	ATP binding;; behavioral response to pain;; central nervous system development;; definitive hemopoiesis;; DNA binding;; embryonic hemopoiesis;; in utero embryonic development;; liver development;; neuron development;; neuron differentiation;; nucleus;; positive regulation of angiogenesis;; protein binding;; regulation of transcription, DNA-dependent;; response to retinoic acid;; skeletal system development;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; nucleoside binding;; nucleotide binding;; protein binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; immune system process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; behavior;; biosynthetic process;; cellular developmental process;; cellular metabolic process;; embryonic development;; immune system development;; macromolecule metabolic process;; multicellular organismal development;; multicellular organismal response to stress;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; response to chemical stimulus;; response to external stimulus;; response to stress
72.8341	113.7913	99.7284	32.7863	33.6534	31.1564	0.01327002	1.52919	6.55224	5.02305	1332966	1422865_at	16 62.2 cM			chr16:92601710-92826311	16 C4	RSQ	Mm.4081	NM_001111022	4	1	12394		  Runx1	runt related transcription factor 1 (Runx1), transcript variant 2, mRNA.		Acute myeloid leukemia CLASS Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Acute myeloid leukemia [PATH:mmu05221] Human Diseases; Cancers; Chronic myeloid leukemia [PATH:mmu05220];; Chronic myeloid leukemia;; Pathways in cancer	ATP binding;; behavioral response to pain;; central nervous system development;; definitive hemopoiesis;; DNA binding;; embryonic hemopoiesis;; in utero embryonic development;; liver development;; neuron development;; neuron differentiation;; nucleus;; positive regulation of angiogenesis;; protein binding;; regulation of transcription, DNA-dependent;; response to retinoic acid;; skeletal system development;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; nucleoside binding;; nucleotide binding;; protein binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; immune system process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; behavior;; biosynthetic process;; cellular developmental process;; cellular metabolic process;; embryonic development;; immune system development;; macromolecule metabolic process;; multicellular organismal development;; multicellular organismal response to stress;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; response to chemical stimulus;; response to external stimulus;; response to stress
565.6472	531.9279	577.7242	217.0964	252.9191	294.0813	0.008085639	1.14276	9.12436	7.98160	1332998	1422904_at	1	chr1:164806985-164807074	1 H2.1	chr1:164805177-164828843	1 H2.1	RSQ	Mm.10929	NM_018881	1	1	55990		  Fmo2	flavin containing monooxygenase 2 (Fmo2), mRNA.		Drug metabolism - cytochrome P450 CLASS Metabolism; Xenobiotics Biodegradation and Metabolism; Drug metabolism - cytochrome P450 [PATH:mmu00982]	endoplasmic reticulum;; FAD binding;; flavin-containing monooxygenase activity;; integral to membrane;; intrinsic to endoplasmic reticulum membrane;; magnesium ion binding;; membrane;; microsome;; monooxygenase activity;; NADP or NADPH binding;; oxidation reduction;; oxidoreductase activity;; oxygen and reactive oxygen species metabolic process	cell;; cell part;; organelle;; organelle part	cell fraction;; cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	binding;; catalytic activity	cofactor binding;; ion binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity	cellular process;; metabolic process	cellular metabolic process;; oxidation reduction
324.3741	402.0277	419.1408	105.3137	111.7462	152.5590	0.0020098326	1.64270	8.56799	6.92528	1344723	1422905_s_at	1	chr1:164806589-164806972	1 H2.1	chr1:164805177-164828843	1 H2.1	RSQ	Mm.10929	NM_018881	1	1	55990		  Fmo2	flavin containing monooxygenase 2 (Fmo2), mRNA.		Drug metabolism - cytochrome P450 CLASS Metabolism; Xenobiotics Biodegradation and Metabolism; Drug metabolism - cytochrome P450 [PATH:mmu00982]	endoplasmic reticulum;; FAD binding;; flavin-containing monooxygenase activity;; integral to membrane;; intrinsic to endoplasmic reticulum membrane;; magnesium ion binding;; membrane;; microsome;; monooxygenase activity;; NADP or NADPH binding;; oxidation reduction;; oxidoreductase activity;; oxygen and reactive oxygen species metabolic process	cell;; cell part;; organelle;; organelle part	cell fraction;; cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	binding;; catalytic activity	cofactor binding;; ion binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity	cellular process;; metabolic process	cellular metabolic process;; oxidation reduction
592.1016	571.8880	623.0288	289.8741	274.8186	325.9617	0.0012826571	1.00742	9.21748	8.21006	1333004	1422912_at	14 15.0 cM	chr14:47003403-47003996	14 C1	chr14:47003194-47010274	14 C1	RSQ	Mm.6813	NM_007554	1	1	12159	RP23-87H19.2	  Bmp4	bone morphogenetic protein 4 (Bmp4), mRNA.		Basal cell carcinoma CLASS Environmental Information Processing; Signal Transduction; Hedgehog signaling pathway [PATH:mmu04340] Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu0;; Hedgehog signaling pathway;; Pathways in cancer;; TGF-beta signaling pathway	anatomical structure formation involved in morphogenesis;; angiogenesis;; BMP signaling pathway;; BMP signaling pathway;; branching involved in lung morphogenesis;; branching involved in prostate gland morphogenesis;; branching involved in ureteric bud morphogenesis;; bronchus development;; bud dilation involved in lung branching;; camera-type eye development;; cartilage development;; cell differentiation;; cell fate commitment;; cytokine activity;; dorsal/ventral neural tube patterning;; embryonic morphogenesis;; epithelial cell proliferation involved in lung morphogenesis;; erythrocyte differentiation;; extracellular region;; extracellular space;; forebrain development;; germ cell development;; growth;; growth factor activity;; heart development;; heparin binding;; induction of an organ;; lens induction in camera-type eye;; lung alveolus development;; lung development;; lung morphogenesis;; mammary gland formation;; mesodermal cell fate determination;; metanephros development;; metanephros development;; multicellular organismal development;; negative regulation of cell proliferation;; negative regulation of chondrocyte differentiation;; negative regulation of epithelial cell proliferation;; negative regulation of gene expression;; negative regulation of myoblast differentiation;; negative regulation of prostatic bud formation;; negative regulation of prostatic bud formation;; negative regulation of striated muscle development;; neuron fate commitment;; neuron fate commitment;; odontogenesis of dentine-containing tooth;; odontogenesis of dentine-containing tooth;; ossification;; osteoblast differentiation;; pituitary gland development;; positive regulation of bone mineralization;; positive regulation of cell death;; positive regulation of cell differentiation;; positive regulation of gene expression;; positive regulation of ossification;; positive regulation of osteoblast differentiation;; positive regulation of protein amino acid phosphorylation;; positive regulation of transcription from RNA polymerase II promoter;; post-embryonic development;; prostate gland morphogenesis;; protein binding;; proteinaceous extracellular matrix;; regulation of branching involved in prostate gland morphogenesis;; regulation of cell differentiation;; regulation of gene expression;; regulation of gene expression;; regulation of morphogenesis of a branching structure;; regulation of smooth muscle cell proliferation;; skeletal system development;; skeletal system development;; smooth muscle cell differentiation;; specification of organ position;; telencephalon regionalization;; tissue development;; trachea development;; ureteric bud development;; ureteric bud development;; ureteric bud development	extracellular region;; extracellular region part	extracellular matrix;; extracellular region part;; extracellular space	binding	carbohydrate binding;; pattern binding;; protein binding	anatomical structure formation;; biological regulation;; cellular process;; death;; developmental process;; growth;; immune system process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell communication;; cell death;; cell proliferation;; cellular developmental process;; cellular metabolic process;; developmental growth;; embryonic development;; gamete generation;; immune system development;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; ossification;; pattern specification process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of metabolic process;; positive regulation of multicellular organismal process;; post-embryonic development;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; reproductive developmental process;; reproductive process;; sexual reproduction;; tissue remodeling
3851.2575	3763.3230	3917.4368	833.1458	935.9843	662.7492	0.0037820971	2.25984	11.90820	9.64836	1333245	1423233_at	16 A2|16 9.0 cM	chr16:15888053-15888517	16 A2			UGA	Mm.347407				12609		  Cebpd	CCAAT/enhancer binding protein (C/EBP), delta (Cebpd), mRNA			DNA binding;; nucleus;; positive regulation of transcription from RNA polymerase II promoter;; promoter binding;; protein binding;; protein dimerization activity;; protein heterodimerization activity;; protein homodimerization activity;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; specific RNA polymerase II transcription factor activity;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; RNA polymerase II transcription factor activity;; transcription factor activity	biological regulation;; cellular process;; metabolic process;; positive regulation of biological process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
1038.9927	993.4050	1090.4613	256.3508	270.4106	278.2632	3.4088549e-06	1.95555	10.02264	8.06710	1344806	1423250_a_at	1 101.5 cM	chr1:188449250-188454584	1 H5	chr1:188447064-188529871	1 H5	RSQ	Mm.18213	NM_009367	1	1	21808		  Tgfb2	transforming growth factor, beta 2 (Tgfb2), mRNA.		Cell cycle;; Chronic myeloid leukemia CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu0;; Colorectal cancer;; Cytokine-cytokine receptor interaction;; MAPK signaling pathway;; Pancreatic cancer;; Pathways in cancer;; Renal cell carcinoma;; TGF-beta signaling pathway	activation-induced cell death of T cells;; axon;; axon guidance;; blood vessel development;; blood vessel remodeling;; cartilage condensation;; cell growth;; cell proliferation;; cell soma;; dopamine biosynthetic process;; extracellular matrix organization;; extracellular region;; extracellular space;; growth;; growth factor activity;; hair follicle development;; hair follicle morphogenesis;; heart development;; hemopoiesis;; induction of apoptosis;; negative regulation of keratinocyte differentiation;; neuron development;; neuron fate commitment;; pathway-restricted SMAD protein phosphorylation;; positive regulation of cell cycle;; protein binding;; regulation of apoptosis;; skeletal system development;; somatic stem cell division;; transforming growth factor beta receptor binding	cell;; cell part;; extracellular region;; extracellular region part	cell part;; cell projection;; cell soma;; extracellular region part;; extracellular space	binding	protein binding	biological adhesion;; biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; growth;; immune system process;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process	alcohol metabolic process;; anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell adhesion;; cell communication;; cell cycle;; cell death;; cell division;; cell growth;; cell motion;; cell projection organization;; cell proliferation;; cellular component morphogenesis;; cellular developmental process;; cellular metabolic process;; extracellular structure organization;; immune system development;; leukocyte homeostasis;; localization of cell;; macromolecule metabolic process;; molting cycle;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process;; tissue remodeling
253.6104	251.8186	236.8186	129.8823	109.4371	106.9456	0.0029925649	1.10487	7.95012	6.84525	1344810	1423267_s_at	15 57.4 cM	chr15:103174941-103175288	15 F3	chr15:103174716-103197179	15 F3	RSQ		NM_010577	1	1	16402		  Itga5	integrin alpha 5 (fibronectin receptor alpha) (Itga5), mRNA.		ECM-receptor interaction;; Focal adhesion;; Hematopoietic cell lineage;; Regulation of actin cytoskeleton CLASS Environmental Information Processing; Signaling Molecules and Interaction; ECM-receptor interaction [PATH:mmu04512] Cellular Processes; Cell Motility; Regulation of actin cytoskeleton [PATH:mmu04810] Cellular Processes; Cell Communication; Focal adhesion [PATH:mmu04510] Cellular Processes; Immune System; Hematopoie	calcium ion binding;; cell adhesion;; cell-cell adhesion mediated by integrin;; cell-substrate junction assembly;; external side of plasma membrane;; heterophilic cell adhesion;; integral to membrane;; integrin binding;; integrin complex;; integrin-mediated signaling pathway;; leukocyte adhesion;; membrane;; memory;; protein binding;; receptor activity;; synaptosome	cell;; cell part;; macromolecular complex	cell fraction;; cell part;; cell surface;; membrane;; membrane part;; protein complex	binding;; molecular transducer activity	ion binding;; protein binding;; signal transducer activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; multicellular organismal process;; regulation of biological process;; response to stimulus	behavior;; cell adhesion;; cell communication;; cell junction organization;; cellular component assembly;; regulation of biological process;; regulation of cellular process;; system process
812.3741	814.3961	811.5941	292.5665	475.0839	317.5379	0.030864828	1.20159	9.66673	8.46515	1333391	1423405_at	6 E3|6 46.0 cM	chr6:115195833-115196123	6 E3			UG5	Mm.255607				110595		  Timp4	Tissue inhibitor of metalloproteinase 4 (Timp4), mRNA	Inhibition of Matrix Metalloproteinases		enzyme inhibitor activity;; extracellular region;; metalloendopeptidase inhibitor activity;; proteinaceous extracellular matrix	extracellular region;; extracellular region part	extracellular matrix;; extracellular region part	enzyme regulator activity	enzyme inhibitor activity;; metalloenzyme regulator activity		
615.3186	638.4938	622.9057	206.7074	307.3741	320.0681	0.026542653	1.19635	9.28886	8.09251	1333550	1423597_at	5	chr5:68013016-68013563	5 C3.1	chr5:68009378-68238670	5 C3.1	RSQ	Mm.153230	NM_009727	2	1	11980		  Atp8a1	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (Atp8a1), transcript variant 2, mRNA.			ATP binding;; ATP biosynthetic process;; ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;; catalytic activity;; cytoplasmic vesicle;; hydrolase activity;; hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;; integral to membrane;; magnesium ion binding;; membrane;; metabolic process;; metal ion binding;; nucleotide binding;; phospholipid transport;; phospholipid-translocating ATPase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; vesicle	binding;; catalytic activity;; transporter activity	hydrolase activity;; ion binding;; nucleoside binding;; nucleotide binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization;; metabolic process	biosynthetic process;; cellular metabolic process;; establishment of localization;; nitrogen compound metabolic process;; primary metabolic process;; transport
548.5184	561.3741	523.8246	200.3573	294.5273	292.9585	0.025677808	1.07397	9.08838	8.01441	1334316	1424598_at	9 26.0 cM	chr9:44444736-44445137	9 A5.2	chr9:44412974-44448814	9 A5.2	RSQ	Mm.267061	NM_007841	3	1	13209		  Ddx6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), transcript variant 3, mRNA.			ATP binding;; ATP-dependent helicase activity;; cytoplasm;; helicase activity;; hydrolase activity;; nucleic acid binding;; nucleotide binding;; RNA binding	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; catalytic activity	hydrolase activity;; nucleic acid binding;; nucleoside binding;; nucleotide binding		
2310.2908	2363.1779	2260.7630	864.6558	971.7345	767.6399	0.003715644	1.41943	11.17432	9.75490	1345101	1424607_a_at	3			chr3:42306621-42308720	3 B	RSQ		XR_030788	15	15	100039204		  LOC100039204	PREDICTED: hypothetical protein LOC100039204 (LOC100039204), misc RNA.									
2286.4086	2333.3775	2335.1831	961.7436	901.1189	802.9615	0.0026140747	1.38737	11.17880	9.79142	1345103	1424609_a_at						IPA							  	Mus musculus, Similar to RIKEN cDNA 1700066C05 gene, clone MGC:28125 IMAGE:3980327, mRNA, complete cds									
1882.1954	1981.8484	1861.9929	553.2019	655.3545	381.7645	0.013621537	1.88304	10.89782	9.01478	1334343	1424638_at	17 15.23 cM	chr17:29237151-29237610	17 A3.3	chr17:29230716-29237667	17 A3.3	RSQ	Mm.477981	NM_007669	2	1	12575		  Cdkn1a	cyclin-dependent kinase inhibitor 1A (P21) (Cdkn1a), transcript variant 1, mRNA.	ATM Signaling Pathway;; Cell Cycle: G1/S Check Point;; Cell Cycle: G2/M Checkpoint;; Cyclins and Cell Cycle Regulation;; Effects of calcineurin in Keratinocyte Differentiation;; Erythropoietin mediated neuroprotection through NF-kB;; Influence of Ras and Rho proteins on G1 to S Transition;; p53 Signaling Pathway	Bladder cancer;; Cell cycle;; Chronic myeloid leukemia CLASS Environmental Information Processing; Signal Transduction; ErbB signaling pathway [PATH:mmu04012] Cellular Processes; Cell Growth and Death; Cell cycle [PATH:mmu04110] Cellular Processes; Cell Growth and Death; p53 signaling pathway [PATH:mmu04115] Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases;;; ErbB signaling pathway;; Glioma;; Melanoma;; p53 signaling pathway;; Pathways in cancer;; Prostate cancer	cell cycle;; cell cycle arrest;; cyclin binding;; cyclin-dependent protein kinase holoenzyme complex;; cyclin-dependent protein kinase inhibitor activity;; cytoplasm;; cytosol;; kinase activity;; metal ion binding;; negative regulation of apoptosis;; negative regulation of cell proliferation;; negative regulation of cyclin-dependent protein kinase activity;; nucleus;; positive regulation of B cell proliferation;; positive regulation of programmed cell death;; protein binding;; protein kinase inhibitor activity;; regulation of cell cycle;; response to DNA damage stimulus;; response to UV;; zinc ion binding	cell;; cell part;; macromolecular complex;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle;; protein complex	binding;; catalytic activity;; enzyme regulator activity	enzyme inhibitor activity;; ion binding;; kinase regulator activity;; protein binding;; transferase activity	biological regulation;; cellular process;; death;; developmental process;; immune system process;; metabolic process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	cell activation;; cell cycle;; cell cycle process;; cell death;; cell proliferation;; cellular metabolic process;; leukocyte activation;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of immune system process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of metabolic process;; regulation of molecular function;; response to abiotic stimulus;; response to stress
340.0717	296.7081	309.6962	152.7802	124.2201	149.2396	0.0011867783	1.15458	8.29910	7.14452	1345189	1424942_a_at	15 32.0 cM	chr15:61821207-61821618	15 D1	chr15:61816895-61821916	15 D1	RSQ	Mm.2444	NM_010849	1	1	17869		  Myc	myelocytomatosis oncogene (Myc), mRNA.	Cadmium induces DNA synthesis and proliferation in macrophages;; CTCF: First Multivalent Nuclear Factor;; Erk1/Erk2 Mapk Signaling pathway;; IL-2 Receptor Beta Chain in T cell Activation;; Inhibition of Cellular Proliferation by Gleevec;; MAPKinase Signaling Pathway;; Neuropeptides VIP and PACAP inhibit the apoptosis of activated T cells;; Overview of telomerase protein component gene hTert Transcriptional Regulation;; p38 MAPK Signaling Pathway;; Role of EGF Receptor Transactivation by GPCRs in Cardiac Hypertrophy;; Telomeres, Telomerase, Cellular Aging, and  Immortality;; Tumor Suppressor Arf Inhibits Ribosomal Biogenesis;; WNT Signaling Pathway	Acute myeloid leukemia;; Bladder cancer;; Chronic myeloid leukemia;; Colorectal cancer;; Endometrial cancer;; ErbB signaling pathway;; Jak-STAT signaling pathway;; MAPK signaling pathway;; Pathways in cancer;; Small cell lung cancer CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Environmental Information Processing; Signal Transduction; ErbB signaling pathway [PATH:mmu04012] Environmental Information Processing; Signal Transduction; Wnt signaling pathway [PATH:mmu04310] Environmental Information Process;; TGF-beta signaling pathway;; Thyroid cancer;; Wnt signaling pathway	activation of caspase activity;; activation of pro-apoptotic gene products;; activation of pro-apoptotic gene products;; axon;; B cell apoptosis;; detection of mechanical stimulus involved in sensory perception of sound;; DNA binding;; DNA fragmentation involved in apoptosis;; induction of apoptosis by intracellular signals;; induction of apoptosis by intracellular signals;; middle ear morphogenesis;; negative regulation of protein binding;; negative regulation of specific transcription from RNA polymerase II promoter;; negative regulation of survival gene product expression;; negative regulation of survival gene product expression;; nuclear body;; nucleus;; nucleus;; pigmentation;; positive regulation of B cell apoptosis;; positive regulation of catalytic activity;; positive regulation of cell proliferation;; positive regulation of cell proliferation;; positive regulation of cell proliferation;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; protein binding;; protein processing;; regulation of apoptosis;; regulation of gene expression;; regulation of transcription;; regulation of transcription, DNA-dependent;; release of cytochrome c from mitochondria;; response to alkaloid;; response to radiation;; response to radiation;; skeletal system morphogenesis;; spindle;; transcription;; transcription factor activity;; transcription regulator activity	cell;; cell part;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; cell projection;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle lumen;; organelle part	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; pigmentation;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; catabolic process;; cell death;; cell proliferation;; cellular component disassembly;; cellular metabolic process;; detection of stimulus;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; organelle organization;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of molecular function;; response to abiotic stimulus;; response to chemical stimulus;; response to external stimulus;; system process
7047.1436	7061.6497	6869.3071	3218.3337	3571.3879	3668.6853	0.0022354063	1.00638	12.77152	11.76514	1345308	1425281_a_at	X	chrX:137074816-137075371	X F1	chrX:137074066-137077724	X F1	RSQ	Mm.22216	NM_010286	2	1	14605	RP23-440B21.1	  Tsc22d3	TSC22 domain family, member 3 (Tsc22d3), transcript variant 2, mRNA.			anti-apoptosis;; regulation of transcription, DNA-dependent;; response to osmotic stress;; transcription factor activity			binding;; transcription regulator activity	nucleic acid binding;; transcription factor activity	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	biosynthetic process;; cell death;; cellular metabolic process;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; response to abiotic stimulus;; response to stress
489.8741	531.3741	449.5627	146.8204	163.7786	190.4401	0.00065296593	1.55851	8.93408	7.37557	1334833	1425351_at	2	chr2:151935679-151936227	2 G3	chr2:151931465-151937089	2 G3	RSQ	Mm.218639	NM_029688	1	1	76650		  Srxn1	sulfiredoxin 1 homolog (S. cerevisiae) (Srxn1), mRNA.			antioxidant activity;; ATP binding;; cytoplasm;; cytosol;; magnesium ion binding;; nucleotide binding;; oxidation reduction;; oxidoreductase activity;; response to oxidative stress;; sulfiredoxin activity	cell;; cell part	cell part;; intracellular;; intracellular part	antioxidant activity;; binding;; catalytic activity	ion binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity	metabolic process;; response to stimulus	oxidation reduction;; response to chemical stimulus;; response to stress
137.4483	161.0408	147.2714	38.7712	32.2961	48.6472	0.0034930636	1.91396	7.21212	5.29816	1334842	1425362_at	5	chr5:138104059-138104479	5 G2	chr5:138104037-138125921	5 G2	RSQ	Mm.260869	NM_145566	1	1	231801		  Agfg2	ArfGAP with FG repeats 2 (Agfg2), transcript variant 1, mRNA.			ARF GTPase activator activity;; metal ion binding;; regulation of ARF GTPase activity;; zinc ion binding			binding;; enzyme regulator activity	enzyme activator activity;; ion binding;; nucleoside-triphosphatase regulator activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process;; regulation of molecular function
238.4329	294.7137	241.7933	87.8747	121.8584	79.4824	0.0061270902	1.43975	8.00608	6.56633	1334929	1425514_at	13 50.0 cM	chr13:102453666-102454171	13 D1	chr13:102450715-102462602	13 D1	RSQ	Mm.259333	NM_001024955	2	1	18708		  Pik3r1	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) (Pik3r1), transcript variant 1, mRNA.	AKT Signaling Pathway;; B Cell Survival Pathway;; Control of skeletal myogenesis by HDAC & calcium/calmodulin-dependent kinase (CaMK);; Corticosteroids and cardioprotection;; CTCF: First Multivalent Nuclear Factor;; CXCR4 Signaling Pathway;; EGF Signaling Pathway;; Erk and PI-3 Kinase Are Necessary for Collagen Binding in Corneal Epithelia;; Fc Epsilon Receptor I Signaling in Mast Cells;; Growth Hormone Signaling Pathway;; Human Cytomegalovirus and Map Kinase Pathways;; IGF-1 Signaling Pathway;; IL-2 Receptor Beta Chain in T cell Activation;; IL-7 Signal Transduction;; Inactivation of Gsk3 by AKT causes accumulation of b-catenin in Alveolar Macrophages;; Influence of Ras and Rho proteins on G1 to S Transition;; Inhibition of Cellular Proliferation by Gleevec;; Insulin Signaling Pathway;; mTOR Signaling Pathway;; Multiple antiapoptotic pathways from IGF-1R signaling lead to BAD phosphorylation;; Nerve growth factor pathway (NGF);; NFAT and Hypertrophy of the heart (Transcription in the broken heart);; PDGF Signaling Pathway;; Phospholipase C Signaling Pathway;; Phospholipids as signalling intermediaries;; PTEN dependent cell cycle arrest and apoptosis;; Rac 1 cell motility signaling pathway;; Ras Signaling Pathway;; Ras-Independent pathway in NK cell-mediated cytotoxicity;; Regulation of BAD phosphorylation;; Regulation of eIF4e and p70 S6 Kinase;; Role of ERBB2 in Signal Transduction and Oncology;; Role of Erk5 in Neuronal Survival;; Role of nicotinic acetylcholine receptors in the regulation of apoptosis;; Role of PI3K subunit p85 in regulation of Actin Organization and Cell Migration;; Signaling of Hepatocyte Growth Factor Receptor;; Skeletal muscle hypertrophy is regulated via AKT/mTOR pathway;; T Cell Receptor Signaling Pathway;; The Co-Stimulatory Signal During T-cell Activation;; The IGF-1 Receptor and Longevity;; Thrombin signaling and protease-activated receptors;; TPO Signaling Pathway;; Transcription factor CREB and its extracellular signals;; Trefoil Factors Initiate  Mucosal Healing;; Trka Receptor Signaling Pathway;; Tumor Suppressor Arf Inhibits Ribosomal Biogenesis	Acute myeloid leukemia;; Apoptosis;; B cell receptor signaling pathway;; Chemokine signaling pathway;; Chronic myeloid leukemia;; Colorectal cancer;; Endometrial cancer;; ErbB signaling pathway;; Fc epsilon RI signaling pathway;; Focal adhesion;; Glioma;; Insulin signaling pathway;; Jak-STAT signaling pathway;; Leukocyte transendothelial migration;; Melanoma;; mTOR signaling pathway;; Natural killer cell mediated cytotoxicity;; Neurotrophin signaling pathway;; Non-small cell lung cancer CLASS Environmental Information Processing; Signal Transduction; ErbB signaling pathway [PATH:mmu04012] Environmental Information Processing; Signal Transduction; VEGF signaling pathway [PATH:mmu04370] Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Environmental Informatio;; Pancreatic cancer;; Pathways in cancer;; Phosphatidylinositol signaling system;; Prostate cancer;; Regulation of actin cytoskeleton;; Renal cell carcinoma;; Small cell lung cancer;; T cell receptor signaling pathway;; Toll-like receptor signaling pathway;; Type II diabetes mellitus;; VEGF signaling pathway	1-phosphatidylinositol-3-kinase activity;; B cell differentiation;; cytoplasm;; cytosol;; insulin receptor substrate binding;; intracellular;; kinase activity;; membrane;; negative regulation of apoptosis;; negative regulation of apoptosis;; negative regulation of cell-matrix adhesion;; negative regulation of osteoclast differentiation;; phosphoinositide 3-kinase complex;; phosphoinositide 3-kinase regulator activity;; positive regulation of cell migration;; protein amino acid phosphorylation;; protein binding;; signal transduction	cell;; cell part;; macromolecular complex	cell part;; intracellular;; intracellular part;; membrane;; protein complex	binding;; catalytic activity;; enzyme regulator activity	kinase regulator activity;; protein binding;; transferase activity	biological adhesion;; biological regulation;; cellular process;; death;; developmental process;; immune system process;; localization;; locomotion;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; cell activation;; cell adhesion;; cell communication;; cell death;; cell motility;; cell motion;; cellular developmental process;; cellular metabolic process;; immune system development;; leukocyte activation;; localization of cell;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; positive regulation of biological process;; positive regulation of cellular process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of localization;; regulation of locomotion;; regulation of multicellular organismal process
7601.7352	7438.6597	7528.0867	1933.6239	2923.1461	2082.8401	0.010975636	1.72542	12.87700	11.15158	1334990	1425631_at	19	chr19:36807805-36808192	19 C2	chr19:36806220-36811094	19 C2	RSQ	Mm.24724	NM_016854	1	1	53412		  Ppp1r3c	protein phosphatase 1, regulatory (inhibitor) subunit 3C (Ppp1r3c), mRNA.		Insulin signaling pathway CLASS Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910]	carbohydrate metabolic process;; glycogen biosynthetic process;; glycogen metabolic process;; protein binding;; protein targeting			binding	protein binding	cellular process;; establishment of localization;; localization;; metabolic process	biosynthetic process;; cellular localization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; establishment of protein localization;; macromolecule localization;; macromolecule metabolic process;; primary metabolic process;; transport
2294.9077	2190.1389	2259.5349	649.2134	764.0944	680.9244	0.00083685428	1.69044	11.13428	9.44384	1345554	1425837_a_at	3	chr3:51055003-51055460	3 C	chr3:51028368-51055576	3 C	RSQ	Mm.86541	NM_009834	2	2	12457		  Ccrn4l	CCR4 carbon catabolite repression 4-like (S. cerevisiae) (Ccrn4l), mRNA.	Selective expression of chemokine receptors during T-cell polarization		rhythmic process					rhythmic process	
887.8400	890.4088	845.8764	373.3417	355.3185	414.8619	0.0011256794	1.20099	9.77226	8.57127	1345648	1426004_a_at	2 89.0 cM	chr2:157943001-157943415	2 H1	chr2:157942140-157972128	2 H1	RSQ	Mm.330731	NM_009373	1	1	21817	RP23-396G1.2	  Tgm2	transglutaminase 2, C polypeptide (Tgm2), mRNA.	Phospholipase C d1 in phospholipid associated cell signaling	Huntington's disease CLASS Human Diseases; Neurodegenerative Diseases; Huntington's disease [PATH:mmu05016]	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger;; acyltransferase activity;; branching involved in salivary gland morphogenesis;; calcium ion binding;; cytoplasm;; cytosol;; G-protein coupled receptor protein signaling pathway;; GTP binding;; membrane;; metal ion binding;; peptide cross-linking;; positive regulation of cell adhesion;; protein-glutamine gamma-glutamyltransferase activity;; proteinaceous extracellular matrix;; salivary gland cavitation;; transferase activity	cell;; cell part;; extracellular region;; extracellular region part	cell part;; extracellular matrix;; extracellular region part;; intracellular;; intracellular part;; membrane	binding;; catalytic activity	ion binding;; nucleotide binding;; transferase activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; positive regulation of biological process;; positive regulation of cellular process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of molecular function
591.7321	488.5075	601.5047	277.7883	268.7697	224.8080	0.0011437022	1.12428	9.12449	8.00021	1345779	1426210_x_at	9 F1	chr9:106373029-106373498	9 F1			UG5	Mm.273659				235587		  Parp3	NAD+ ADP-ribosyltransferase 3 PARP-3		Base excision repair CLASS Genetic Information Processing; Replication and Repair; Base excision repair [PATH:mmu03410]	transferase activity			catalytic activity	transferase activity		
4148.3515	4008.6530	4122.3605	1741.8214	1744.9808	1552.3649	0.00099112834	1.28695	11.99883	10.71188	1345786	1426235_a_at	1	chr1:155754454-155755308	1 G3	chr1:155747074-155756844	1 G3	RSQ	Mm.210745	NM_008131	1	1	14645		  Glul	glutamate-ammonia ligase (glutamine synthetase) (Glul), mRNA.		Alanine, aspartate and glutamate metabolism;; Arginine and proline metabolism;; Metabolic pathways CLASS Metabolism; Energy Metabolism; Nitrogen metabolism [PATH:mmu00910] Metabolism; Amino Acid Metabolism; Alanine, aspartate and glutamate metabolism [PATH:mmu00250] Metabolism; Amino Acid Metabolism; Arginine and proline metabolism [PATH:mmu00330] Metabolism; Glycan Biosynthesis and Metabolism; Peptidoglycan biosynthesis [PATH:mmu0;; Nitrogen metabolism;; Peptidoglycan biosynthesis	ATP binding;; catalytic activity;; cytoplasm;; glutamate-ammonia ligase activity;; glutamine biosynthetic process;; intracellular;; ligase activity;; mitochondrion;; nitrogen compound metabolic process;; nucleotide binding;; response to glucose stimulus	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ligase activity;; nucleoside binding;; nucleotide binding	cellular process;; metabolic process;; response to stimulus	biosynthetic process;; cellular metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; response to chemical stimulus
6927.6529	6899.3741	6905.6186	2746.8536	2554.6209	2686.6089	0.00048649192	1.37664	12.75465	11.37801	1345787	1426236_a_at	1	chr1:155756223-155756784	1 G3	chr1:155747074-155756844	1 G3	RSQ	Mm.210745	NM_008131	1	1	14645		  Glul	glutamate-ammonia ligase (glutamine synthetase) (Glul), mRNA.		Alanine, aspartate and glutamate metabolism;; Arginine and proline metabolism;; Metabolic pathways CLASS Metabolism; Energy Metabolism; Nitrogen metabolism [PATH:mmu00910] Metabolism; Amino Acid Metabolism; Alanine, aspartate and glutamate metabolism [PATH:mmu00250] Metabolism; Amino Acid Metabolism; Arginine and proline metabolism [PATH:mmu00330] Metabolism; Glycan Biosynthesis and Metabolism; Peptidoglycan biosynthesis [PATH:mmu0;; Nitrogen metabolism;; Peptidoglycan biosynthesis	ATP binding;; catalytic activity;; cytoplasm;; glutamate-ammonia ligase activity;; glutamine biosynthetic process;; intracellular;; ligase activity;; mitochondrion;; nitrogen compound metabolic process;; nucleotide binding;; response to glucose stimulus	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ligase activity;; nucleoside binding;; nucleotide binding	cellular process;; metabolic process;; response to stimulus	biosynthetic process;; cellular metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; response to chemical stimulus
177.4953	205.9852	191.7385	74.0406	90.4069	97.7283	0.0034030352	1.14057	7.58034	6.43977	1335426	1426446_at	8	chr8:122686736-122687249	8 E1	chr8:122669128-122687318	8 E1	RSQ	Mm.101958	NM_172286	1	1	234797		  6430548M08Rik	RIKEN cDNA 6430548M08 gene (6430548M08Rik), mRNA.									
328.8571	323.8853	319.5995	140.8127	159.8146	116.5186	0.010865646	1.23282	8.34026	7.10744	1345886	1426599_a_at	4 52.0 cM	chr4:118809597-118809803	4 D2.1	chr4:118781349-118809935	4 D2.1	RSQ	Mm.21002	NM_011400	1	1	20525	RP23-344D2.2	  Slc2a1	solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1), mRNA.	Vitamin C in the Brain	Adipocytokine signaling pathway;; Pathways in cancer;; Renal cell carcinoma CLASS Cellular Processes; Endocrine System; Adipocytokine signaling pathway [PATH:mmu04920] Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Renal cell carcinoma [PATH:mmu05211]	basolateral plasma membrane;; carbohydrate transport;; cytoplasm;; glucose transmembrane transporter activity;; glucose transport;; integral to membrane;; intracellular;; membrane;; plasma membrane;; protein binding;; substrate-specific transmembrane transporter activity;; sugar:hydrogen symporter activity;; transmembrane transport;; transport;; transporter activity	cell;; cell part	cell part;; intracellular;; intracellular part;; membrane;; membrane part	binding;; transporter activity	protein binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization	establishment of localization;; transmembrane transport;; transport
352.4387	343.3140	339.0303	181.9101	182.8125	149.6226	0.0073006463	1.01447	8.42996	7.41550	1335530	1426600_at	4 52.0 cM	chr4:118809340-118809699	4 D2.1	chr4:118781349-118809935	4 D2.1	RSQ	Mm.21002	NM_011400	1	1	20525	RP23-344D2.2	  Slc2a1	solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1), mRNA.	Vitamin C in the Brain	Adipocytokine signaling pathway;; Pathways in cancer;; Renal cell carcinoma CLASS Cellular Processes; Endocrine System; Adipocytokine signaling pathway [PATH:mmu04920] Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Renal cell carcinoma [PATH:mmu05211]	basolateral plasma membrane;; carbohydrate transport;; cytoplasm;; glucose transmembrane transporter activity;; glucose transport;; integral to membrane;; intracellular;; membrane;; plasma membrane;; protein binding;; substrate-specific transmembrane transporter activity;; sugar:hydrogen symporter activity;; transmembrane transport;; transport;; transporter activity	cell;; cell part	cell part;; intracellular;; intracellular part;; membrane;; membrane part	binding;; transporter activity	protein binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization	establishment of localization;; transmembrane transport;; transport
2767.8784	2928.2458	2883.4929	1160.3472	1503.3043	1074.1431	0.012518606	1.21358	11.48133	10.26774	1335613	1426722_at	15	chr15:96517875-96518403	15 F1	chr15:96517822-96530129	15 F1	RSQ	Mm.46754	NM_175121	1	1	67760		  Slc38a2	solute carrier family 38, member 2 (Slc38a2), mRNA.			amino acid transmembrane transporter activity;; amino acid transport;; integral to membrane;; ion transport;; membrane;; plasma membrane;; sodium ion binding;; sodium ion transport;; symporter activity;; transport	cell;; cell part	cell part;; membrane;; membrane part	binding;; transporter activity	ion binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization	establishment of localization;; transmembrane transport;; transport
501.1893	505.0569	492.6994	259.2585	183.5748	210.0638	0.013594973	1.21364	8.96469	7.75105	1335676	1426808_at	14			chr14:47993534-48005842	14 C1	RSQ	Mm.248615	NM_010705	2	1	16854		  Lgals3	lectin, galactose binding, soluble 3 (Lgals3), transcript variant 2, mRNA.			cell differentiation;; cytoplasm;; cytoplasm;; extracellular matrix organization;; IgE binding;; nucleus;; nucleus;; protein binding;; proteinaceous extracellular matrix;; skeletal system development;; sugar binding	cell;; cell part;; extracellular region;; extracellular region part;; organelle	cell part;; extracellular matrix;; extracellular region part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	carbohydrate binding;; protein binding	cellular component organization;; cellular process;; developmental process;; multicellular organismal process	anatomical structure development;; cellular developmental process;; extracellular structure organization;; multicellular organismal development
2348.5110	2284.7302	2262.4852	298.5240	403.2400	434.4057	0.0036942953	2.61964	11.16634	8.54670	1345965	1426875_s_at	2	chr2:151936530-151936918	2 G3	chr2:151931465-151937089	2 G3	RSQ	Mm.218639	NM_029688	1	1	76650		  Srxn1	sulfiredoxin 1 homolog (S. cerevisiae) (Srxn1), mRNA.			antioxidant activity;; ATP binding;; cytoplasm;; cytosol;; magnesium ion binding;; nucleotide binding;; oxidation reduction;; oxidoreductase activity;; response to oxidative stress;; sulfiredoxin activity	cell;; cell part	cell part;; intracellular;; intracellular part	antioxidant activity;; binding;; catalytic activity	ion binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity	metabolic process;; response to stimulus	oxidation reduction;; response to chemical stimulus;; response to stress
824.8623	881.4139	880.7285	275.9297	305.0408	210.5749	0.0067268382	1.72501	9.75141	8.02640	1335747	1426900_at	10	chr10:66718474-66719018	10 B5.1	chr10:66590005-66719074	10 B5.1	RSQ		NM_207221	1	1	108829		  Jmjd1c	jumonji domain containing 1C (Jmjd1c), mRNA.			chromatin modification;; iron ion binding;; metal ion binding;; nucleus;; oxidation reduction;; oxidoreductase activity;; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ion binding;; oxidoreductase activity	biological regulation;; cellular component organization;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; organelle organization;; oxidation reduction;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
176.4817	201.7630	165.4852	80.9674	98.7038	90.2534	0.0010238222	1.01008	7.49682	6.48674	1335839	1427013_at	4	chr4:43526033-43526572	4 B1	chr4:43519897-43526597	4 B1	RSQ	Mm.283682	NM_139305	1	1	230099	RP23-195K8.9	  Car9	carbonic anhydrase 9 (Car9), mRNA.		Nitrogen metabolism CLASS Metabolism; Energy Metabolism; Nitrogen metabolism [PATH:mmu00910]	carbonate dehydratase activity;; cell projection;; integral to membrane;; lyase activity;; membrane;; metal ion binding;; morphogenesis of an epithelium;; one-carbon metabolic process;; plasma membrane;; secretion;; zinc ion binding	cell;; cell part	cell part;; cell projection;; membrane;; membrane part	binding;; catalytic activity	ion binding;; lyase activity	cellular process;; developmental process;; establishment of localization;; localization;; metabolic process;; multicellular organismal process	anatomical structure development;; anatomical structure morphogenesis;; cellular metabolic process;; establishment of localization;; multicellular organismal development;; transport
534.1822	551.9059	548.0636	221.0183	250.4959	167.3495	0.014789219	1.37476	9.08922	7.71446	1335858	1427035_at	14	chr14:70703392-70703860	14 D2	chr14:70703273-70748240	14 D2	RSQ	Mm.270647	NM_001135152	3	1	213053		  Slc39a14	solute carrier family 39 (zinc transporter), member 14 (Slc39a14), transcript variant 2, mRNA.			ferrous iron transmembrane transporter activity;; integral to membrane;; ion transport;; iron ion transport;; membrane;; metal ion transmembrane transporter activity;; metal ion transport;; plasma membrane;; transport;; zinc ion binding;; zinc ion transmembrane transporter activity;; zinc ion transport	cell;; cell part	cell part;; membrane;; membrane part	binding;; transporter activity	ion binding;; substrate-specific transporter activity;; transmembrane transporter activity	establishment of localization;; localization	establishment of localization;; transport
438.6790	394.5662	411.1236	254.8679	182.5828	164.1519	0.025304039	1.07322	8.69486	7.62163	1335950	1427151_at	2	chr2:104594972-104595534	2 E2	chr2:104594951-104656853	2 E2	RSQ	Mm.274314	NM_001123327	1	1	99003	RP24-297H17.9	  Qser1	glutamine and serine rich 1 (Qser1), mRNA.									
1413.5184	1418.8636	1415.4694	677.2941	673.5686	594.2561	0.0029469708	1.12947	10.46755	9.33809	1346056	1427345_a_at	7 F3|7 4.0 cM	chr7:133816668-133817069	7 F3			UGA	Mm.368982				20887		  Sult1a1	Sulfotransferase family 1A, phenol-preferring, member 1 (Sult1a1), mRNA		Sulfur metabolism CLASS Metabolism; Energy Metabolism; Sulfur metabolism [PATH:mmu00920]	aryl sulfotransferase activity;; cytoplasm;; lipid metabolic process;; nucleotide binding;; steroid metabolic process;; sulfotransferase activity;; transferase activity;; tyrosine-ester sulfotransferase activity	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; catalytic activity	nucleotide binding;; transferase activity	cellular process;; metabolic process	biosynthetic process;; cellular metabolic process;; primary metabolic process
202.6882	190.8554	191.8526	73.4948	82.6194	94.4255	0.0046550118	1.23141	7.60777	6.37636	1336117	1427363_at	15	chr15:25567455-25567955	15 B1			UG5	Mm.450192						  	Mus musculus, clone IMAGE:3584279, mRNA									
512.9620	520.0769	505.7236	115.6528	154.0563	153.8371	0.0050888062	1.87375	9.00250	7.12874	1336304	1427638_at	9 23.0 cM			chr9:48462401-48644050	9 A5.3	RSQ	Mm.457803	NM_001033324	1	1	235320		  Zbtb16	zinc finger and BTB domain containing 16 (Zbtb16), mRNA.		Acute myeloid leukemia CLASS Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Acute myeloid leukemia [PATH:mmu05221];; Pathways in cancer	anterior/posterior pattern formation;; DNA binding;; embryonic hindlimb morphogenesis;; embryonic limb morphogenesis;; embryonic pattern specification;; forelimb morphogenesis;; leg morphogenesis;; male germ-line stem cell division;; metal ion binding;; negative regulation of cell proliferation;; negative regulation of transcription, DNA-dependent;; nucleus;; nucleus;; positive regulation of apoptosis;; protein binding;; protein binding;; regulation of transcription;; skeletal system development;; specific transcriptional repressor activity;; transcriptional repressor complex;; zinc ion binding	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	ion binding;; nucleic acid binding;; protein binding;; transcription repressor activity	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell death;; cell division;; cell proliferation;; cellular developmental process;; cellular metabolic process;; embryonic development;; gamete generation;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; pattern specification process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; reproductive process;; sexual reproduction
63.7484	77.4995	54.6763	34.1613	27.3026	28.2637	0.0047284267	1.11905	6.01443	4.89538	1336323	1427683_at	10 35.0 cM	chr10:67004377-67004801	10 B5.1	chr10:67000616-67004936	10 B5.1	RSQ	Mm.290421	NM_010118	1	1	13654		  Egr2	early growth response 2 (Egr2), mRNA.	Neuropeptides VIP and PACAP inhibit the apoptosis of activated T cells		brain segmentation;; DNA binding;; facial nerve structural organization;; intracellular;; metal ion binding;; motor axon guidance;; myelination;; nucleic acid binding;; nucleus;; nucleus;; positive regulation of transcription from RNA polymerase II promoter;; regulation of ossification;; regulation of transcription;; regulation of transcription, DNA-dependent;; rhombomere 3 development;; rhombomere 3 formation;; rhombomere 5 formation;; rhythmic behavior;; rhythmic behavior;; Schwann cell differentiation;; transcription;; transcription factor activity;; transcription factor activity;; transcription regulator activity;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	ion binding;; nucleic acid binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular component organization;; cellular process;; developmental process;; localization;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; response to stimulus;; rhythmic process	anatomical structure arrangement;; anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; behavior;; biosynthetic process;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; cellular homeostasis;; cellular metabolic process;; ensheathment of neurons;; localization of cell;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; ossification;; pattern specification process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; rhythmic behavior;; system process;; tissue remodeling
837.3812	754.2167	840.8943	274.4554	330.3940	419.8076	0.013555441	1.26743	9.66145	8.39402	1346211	1427742_a_at	13	chr13:5864257-5866575	13 A1	chr13:5860734-5869639	13 A1	RSQ	Mm.275036	NM_011803	1	1	23849		  Klf6	Kruppel-like factor 6 (Klf6), mRNA.			cytokine-mediated signaling pathway;; cytoplasm;; DNA binding;; intracellular;; metal ion binding;; nucleic acid binding;; nucleus;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
619.3721	605.6988	652.3240	36.6971	50.5820	47.1409	0.00083893737	3.81650	9.28885	5.47235	1346214	1427747_a_at	2 27.0 cM	chr2:32240946-32241323	2 B	chr2:32240156-32243259	2 B	RSQ	Mm.9537	NM_008491	1	1	16819	RP23-161B9.11	  Lcn2	lipocalin 2 (Lcn2), mRNA.			binding;; extracellular region;; response to virus;; transport;; transporter activity	extracellular region		binding;; transporter activity		establishment of localization;; localization;; multi-organism process;; response to stimulus	establishment of localization;; response to biotic stimulus;; response to other organism;; transport
5457.8172	5366.7867	5325.4095	2285.0649	2958.9112	1856.9451	0.024513423	1.21168	12.39421	11.18253	1346320	1428116_a_at	17 A1|17 3.1 cM					UG5	Mm.1948				21648		  Dynlt1	Dynein light chain Tctex-type 1 (Dynlt1), mRNA			axonemal dynein complex;; cytoplasmic dynein complex;; cytoplasmic dynein complex;; dynein complex;; Golgi apparatus;; microtubule;; microtubule-based process;; motor activity;; protein binding	cell;; cell part;; macromolecular complex;; organelle;; organelle part	axoneme;; axoneme part;; cell part;; cell projection;; cell projection part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part;; protein complex	binding;; catalytic activity	hydrolase activity;; protein binding	cellular process	microtubule-based process
2022.3901	2068.3186	2083.5964	313.0404	399.7279	277.0665	0.0032257794	2.65793	11.00698	8.34906	1336689	1428306_at	10	chr10:59412481-59412957	10 B4	chr10:59412422-59414518	10 B4	RSQ	Mm.21697	NM_029083	1	1	74747		  Ddit4	DNA-damage-inducible transcript 4 (Ddit4), mRNA.		mTOR signaling pathway CLASS Environmental Information Processing; Signal Transduction; mTOR signaling pathway [PATH:mmu04150]	apoptosis;; cytoplasm;; negative regulation of signal transduction	cell;; cell part	cell part;; intracellular;; intracellular part			biological regulation;; cellular process;; death;; negative regulation of biological process;; regulation of biological process	cell communication;; cell death;; negative regulation of biological process;; negative regulation of cellular process;; regulation of biological process;; regulation of cellular process
568.2269	576.4340	533.3693	117.3760	140.0004	154.3352	0.0016525242	2.03537	9.12678	7.09140	1336820	1428776_at	5 E5	chr5:104034768-104035330	5 E5			UGA	Mm.7446				75750		  Slc10a6	Solute carrier family 10 (sodium/bile acid cotransporter family), member 6 (Slc10a6), mRNA			bile acid:sodium symporter activity;; integral to membrane;; ion transport;; membrane;; sodium ion binding;; sodium ion transport;; symporter activity;; transport	cell;; cell part	cell part;; membrane;; membrane part	binding;; transporter activity	ion binding;; substrate-specific transporter activity;; transmembrane transporter activity	establishment of localization;; localization	establishment of localization;; transport
23774.9245	24576.4852	24517.5964	1109.7352	1748.1001	864.5223	0.0045445599	4.35345	14.56789	10.21444	1336865	1428942_at	8 45.0 cM	chr8:96696756-96697386	8 C5	chr8:96696517-96697467	8 C5	RSQ	Mm.147226	NM_008630	1	1	17750		  Mt2	metallothionein 2 (Mt2), mRNA.			cellular zinc ion homeostasis;; detoxification of copper ion;; metal ion binding;; nitric oxide mediated signal transduction;; zinc ion binding			binding	ion binding	biological regulation;; cellular process;; regulation of biological process;; response to stimulus	cell communication;; cellular homeostasis;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; response to chemical stimulus
216.9852	218.3053	220.3186	109.6967	105.6673	104.8300	0.00011858369	1.03415	7.77170	6.73756	1336880	1429033_at	6	chr6:28366904-28367275	6 A3.3	chr6:28366690-28371724	6 A3.3	RSQ	Mm.332950	NM_028900	1	1	74375		  Gcc1	golgi coiled coil 1 (Gcc1), mRNA.			cytoplasm;; Golgi apparatus;; membrane	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane-bounded organelle				
670.9358	665.8286	661.9893	302.0964	283.7407	288.3186	0.00031795607	1.19363	9.37990	8.18627	1346830	1432273_a_at	1 94.0 cM	chr1:175262194-175262805	1 H3	chr1:175262016-175263634	1 H3	RSQ	Mm.6393	NM_010045	1	1	13349		  Darc	Duffy blood group, chemokine receptor (Darc), mRNA.			G-protein coupled receptor activity;; G-protein coupled receptor protein signaling pathway;; inflammatory response;; integral to membrane;; membrane;; receptor activity;; signal transducer activity;; signal transduction	cell;; cell part	cell part;; membrane;; membrane part	molecular transducer activity	signal transducer activity	biological regulation;; cellular process;; regulation of biological process;; response to stimulus	cell communication;; regulation of biological process;; regulation of cellular process;; response to external stimulus;; response to stress
2847.0386	2696.2835	2722.9379	1017.3076	1076.6768	1022.8797	2.5780386e-06	1.40721	11.42765	10.02044	1346897	1433428_x_at	2 H1|2 89.0 cM	chr2:157942194-157942355	2 H1			UG5	Mm.330731				21817	RP23-396G1.2	  Tgm2	Transglutaminase 2, C polypeptide, mRNA (cDNA clone MGC:6152 IMAGE:3256943)	Phospholipase C d1 in phospholipid associated cell signaling	Huntington's disease CLASS Human Diseases; Neurodegenerative Diseases; Huntington's disease [PATH:mmu05016]	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger;; acyltransferase activity;; branching involved in salivary gland morphogenesis;; calcium ion binding;; cytoplasm;; cytosol;; G-protein coupled receptor protein signaling pathway;; GTP binding;; membrane;; metal ion binding;; peptide cross-linking;; positive regulation of cell adhesion;; protein-glutamine gamma-glutamyltransferase activity;; proteinaceous extracellular matrix;; salivary gland cavitation;; transferase activity	cell;; cell part;; extracellular region;; extracellular region part	cell part;; extracellular matrix;; extracellular region part;; intracellular;; intracellular part;; membrane	binding;; catalytic activity	ion binding;; nucleotide binding;; transferase activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; positive regulation of biological process;; positive regulation of cellular process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of molecular function
974.7395	956.1341	1000.0866	552.6467	443.2162	428.4884	0.010269835	1.05022	9.93195	8.88173	1337260	1433508_at	13	chr13:5869083-5869514	13 A1	chr13:5860734-5869639	13 A1	RSQ	Mm.275036	NM_011803	1	1	23849		  Klf6	Kruppel-like factor 6 (Klf6), mRNA.			cytokine-mediated signaling pathway;; cytoplasm;; DNA binding;; intracellular;; metal ion binding;; nucleic acid binding;; nucleus;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
16712.9199	16491.4865	16951.9314	6703.5269	9168.6632	6819.5502	0.015172351	1.15954	14.02909	12.86955	1337327	1433691_at	19	chr19:36806257-36806814	19 C2	chr19:36806220-36811094	19 C2	RSQ	Mm.24724	NM_016854	1	1	53412		  Ppp1r3c	protein phosphatase 1, regulatory (inhibitor) subunit 3C (Ppp1r3c), mRNA.		Insulin signaling pathway CLASS Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910]	carbohydrate metabolic process;; glycogen biosynthetic process;; glycogen metabolic process;; protein binding;; protein targeting			binding	protein binding	cellular process;; establishment of localization;; localization;; metabolic process	biosynthetic process;; cellular localization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; establishment of protein localization;; macromolecule localization;; macromolecule metabolic process;; primary metabolic process;; transport
304.0789	318.9772	314.8499	133.9854	148.4707	121.2928	0.0031344187	1.22061	8.28804	7.06744	1346968	1433757_a_at	14 B	chr14:31998914-31999067	14 B			UG5	Mm.298728				64652		  Nisch	Imidazoline receptor I-1-like protein			actin cytoskeleton organization;; apoptosis;; cell communication;; cytoplasm;; cytosol;; endosome;; integrin binding;; membrane;; negative regulation of cell migration;; phosphoinositide binding;; plasma membrane;; protein binding;; Rac protein signal transduction;; receptor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane-bounded organelle	binding;; molecular transducer activity	lipid binding;; protein binding;; signal transducer activity	biological regulation;; cellular component organization;; cellular process;; death;; localization;; locomotion;; negative regulation of biological process;; regulation of biological process	actin filament-based process;; cell communication;; cell death;; cell motility;; cell motion;; localization of cell;; negative regulation of biological process;; negative regulation of cellular process;; organelle organization;; regulation of biological process;; regulation of cellular process;; regulation of localization;; regulation of locomotion
964.1025	891.5964	967.6248	263.7380	272.2267	230.5185	0.00017946645	1.88374	9.87720	7.99346	1337418	1434025_at	14	chr14:99713709-99714191	14 E2.2			UGA	Mm.441332						  	Transcribed locus									
106.8924	114.4313	121.9852	48.3935	66.0574	57.9822	0.0081414923	1.00300	6.83631	5.83331	1337634	1434752_at	11					UGA	Mm.440925						  	Transcribed locus									
533.5974	489.0088	539.4488	174.5533	198.2024	154.3803	0.0013319039	1.57332	9.02289	7.44957	1347098	1434773_a_at	4 52.0 cM	chr4:118809715-118809927	4 D2.1	chr4:118781349-118809935	4 D2.1	RSQ	Mm.21002	NM_011400	1	1	20525	RP23-344D2.2	  Slc2a1	solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1), mRNA.	Vitamin C in the Brain	Adipocytokine signaling pathway;; Pathways in cancer;; Renal cell carcinoma CLASS Cellular Processes; Endocrine System; Adipocytokine signaling pathway [PATH:mmu04920] Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Renal cell carcinoma [PATH:mmu05211]	basolateral plasma membrane;; carbohydrate transport;; cytoplasm;; glucose transmembrane transporter activity;; glucose transport;; integral to membrane;; intracellular;; membrane;; plasma membrane;; protein binding;; substrate-specific transmembrane transporter activity;; sugar:hydrogen symporter activity;; transmembrane transport;; transport;; transporter activity	cell;; cell part	cell part;; intracellular;; intracellular part;; membrane;; membrane part	binding;; transporter activity	protein binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization	establishment of localization;; transmembrane transport;; transport
1073.9590	1008.7879	1047.2931	454.3997	392.3883	313.9057	0.0097103876	1.44715	10.02653	8.57938	1347155	1435137_s_at						IPA							  1200015M12Rik	RIKEN cDNA 1200015M12 gene									
50.4564	71.2900	67.3881	29.6627	33.2077	29.4021	0.013681779	1.02171	5.96234	4.94063	1337862	1435767_at	9	chr9:40098621-40099186	9 A5.1	chr9:40076800-40099203	9 A5.1	RSQ	Mm.290083	NM_001083917	3	1	235281		  Scn3b	sodium channel, voltage-gated, type III, beta (Scn3b), transcript variant 3, mRNA.			integral to membrane;; ion channel activity;; ion transport;; membrane;; sodium channel activity;; sodium ion binding;; sodium ion transport;; transport;; voltage-gated ion channel activity	cell;; cell part	cell part;; membrane;; membrane part	binding;; transporter activity	ion binding;; substrate-specific transporter activity;; transmembrane transporter activity	establishment of localization;; localization	establishment of localization;; transport
891.6459	850.0964	910.1074	508.6380	411.7681	308.9224	0.02992099	1.13814	9.78723	8.64909	1347378	1436750_a_at	15	chr15:4103756-4103890	15 A1	chr15:3976427-4105344	15 A1	RSQ	Mm.13445	NM_024188	1	1	67041		  Oxct1	3-oxoacid CoA transferase 1 (Oxct1), nuclear gene encoding mitochondrial protein, mRNA.		Butanoate metabolism CLASS Metabolism; Carbohydrate Metabolism; Butanoate metabolism [PATH:mmu00650] Metabolism; Lipid Metabolism; Synthesis and degradation of ketone bodies [PATH:mmu00072] Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine degradation [PATH:mmu00280];; Synthesis and degradation of ketone bodies;; Valine, leucine and isoleucine degradation	3-oxoacid CoA-transferase activity;; cellular ketone body metabolic process;; CoA-transferase activity;; ketone body catabolic process;; metabolic process;; mitochondrion;; transferase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	catalytic activity	transferase activity	cellular process;; metabolic process	catabolic process;; cellular metabolic process
340.2855	327.0920	363.5089	143.2012	182.3139	190.1718	0.0092771147	1.00889	8.42333	7.41445	1338064	1436910_at	1	chr1:159106227-159122987	1 H1	chr1:159065313-159342726	1 H1	RSQ	Mm.235028	NM_177644	1	1	226525		  Rasal2	RAS protein activator like 2 (Rasal2), mRNA.									
367.2300	341.8913	373.3779	108.6035	132.3108	206.8868	0.038096902	1.32634	8.49414	7.16780	1338102	1437110_at	6	chr6:149274479-149274895	6 G3	chr6:149257935-149284185	6 G3	RSQ	Mm.333515	NM_026054	1	1	67246	RP23-214L4.1	  2810474O19Rik	RIKEN cDNA 2810474O19 gene (2810474O19Rik), mRNA.									
4093.1354	3995.7787	3926.6895	1381.2200	1528.2908	1563.0686	0.00060160607	1.42758	11.96745	10.53987	1347528	1437277_x_at	2 H1|2 89.0 cM	chr2:157942194-157942355	2 H1			UGA	Mm.330731				21817	RP23-396G1.2	  Tgm2	Transglutaminase 2, C polypeptide, mRNA (cDNA clone MGC:6152 IMAGE:3256943)	Phospholipase C d1 in phospholipid associated cell signaling	Huntington's disease CLASS Human Diseases; Neurodegenerative Diseases; Huntington's disease [PATH:mmu05016]	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger;; acyltransferase activity;; branching involved in salivary gland morphogenesis;; calcium ion binding;; cytoplasm;; cytosol;; G-protein coupled receptor protein signaling pathway;; GTP binding;; membrane;; metal ion binding;; peptide cross-linking;; positive regulation of cell adhesion;; protein-glutamine gamma-glutamyltransferase activity;; proteinaceous extracellular matrix;; salivary gland cavitation;; transferase activity	cell;; cell part;; extracellular region;; extracellular region part	cell part;; extracellular matrix;; extracellular region part;; intracellular;; intracellular part;; membrane	binding;; catalytic activity	ion binding;; nucleotide binding;; transferase activity	anatomical structure formation;; biological adhesion;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell adhesion;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; positive regulation of biological process;; positive regulation of cellular process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of molecular function
251.4493	255.2963	243.1144	113.0870	141.7079	114.4788	0.0084014882	1.02955	7.96521	6.93567	1338164	1437543_at	3 H3|3 70.5 cM	chr3:151886597-151887090	3 H3			UGA	Mm.278922				51886		  Fubp1	Far upstream element (FUSE) binding protein 1 (Fubp1), mRNA			DNA binding;; nucleus;; regulation of transcription, DNA-dependent;; RNA binding;; transcription	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	nucleic acid binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
160.7681	150.3015	154.8941	67.9840	77.3686	60.0200	0.0051806009	1.18917	7.27856	6.08939	1338271	1438234_at	1	chr1:183107981-183108368	1 H4			UGA	Mm.441222						  	Transcribed locus, strongly similar to XP_573529.1 PREDICTED: similar to WD-repeat protein 26 [Rattus norvegicus]									
1706.4576	1657.5697	1696.3744	911.0775	799.9846	639.6704	0.01663894	1.12115	10.71996	9.59881	1347820	1438385_s_at	8 C3	chr8:88051301-88051346	8 C3			UGA	Mm.200423				108682		  Gpt2	Glutamic pyruvate transaminase (alanine aminotransferase) 2, mRNA (cDNA clone MGC:37704 IMAGE:5065322)		Alanine, aspartate and glutamate metabolism;; Metabolic pathways CLASS Metabolism; Amino Acid Metabolism; Alanine, aspartate and glutamate metabolism [PATH:mmu00250]	biosynthetic process;; catalytic activity;; L-alanine:2-oxoglutarate aminotransferase activity;; pyridoxal phosphate binding;; transaminase activity;; transferase activity;; transferase activity, transferring nitrogenous groups			binding;; catalytic activity	cofactor binding;; lipid binding;; transferase activity;; vitamin binding	metabolic process	biosynthetic process
2907.7630	2772.5652	2929.5266	1377.8717	1524.7609	1254.5803	0.0032672519	1.05452	11.48638	10.43186	1338298	1438443_at	16	chr16:43621146-43621629	16 B4			UGA	Mm.441121						  	Transcribed locus									
295.8198	304.4948	300.6182	153.2075	171.1235	128.5411	0.013397081	1.00211	8.23021	7.22811	1347844	1438511_a_at	14 D3	chr14:79688584-79688641	14 D3			UGA	Mm.29811				66214		  1190002H23Rik	Response gene to complement 32			cell cycle;; cytoplasm;; nucleus;; protein binding;; protein kinase activator activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; enzyme regulator activity	enzyme activator activity;; kinase regulator activity;; protein binding	cellular process	cell cycle
337.9409	350.7296	354.1087	109.2104	109.3411	104.9861	4.8854375e-07	1.68839	8.44096	6.75257	1338349	1438758_at	12 A1.3					IPA							  AL024210	expressed sequence AL024210									
2467.8406	2460.9639	2444.3414	682.8227	923.0777	646.1873	0.0084087856	1.72926	11.26309	9.53383	1348119	1442025_a_at	9	chr9:48459944-48460104	9 A5.3			UGA	Mm.34106						  	Transcribed locus, strongly similar to NP_001028496.1 zinc finger and BTB domain containing 16 [Mus musculus]									
538.5243	592.7676	552.8870	185.5547	199.8664	167.1166	0.00025969455	1.61058	9.13168	7.52110	1338484	1442026_at	9	chr9:48460144-48460494	9 A5.3			UGA	Mm.34106						  	Transcribed locus, strongly similar to NP_001028496.1 zinc finger and BTB domain containing 16 [Mus musculus]									
230.4859	269.2463	220.0104	87.9013	122.0303	115.7237	0.0050191107	1.15310	7.90092	6.74782	1338563	1445689_at	2	chr2:60795842-60796113	2 C1.2			UGA	Mm.441870						  	Transcribed locus									
1031.9227	1059.9033	1031.4726	428.3029	427.6436	395.6834	0.00024973383	1.32012	10.02378	8.70365	1338758	1448199_at	8	chr8:11611781-11612172	8 A1.1	chr8:11611582-11635689	8 A1.1	RSQ	Mm.12459	NM_133971	1	1	102334		  Ankrd10	ankyrin repeat domain 10 (Ankrd10), mRNA.									
701.3741	689.6571	710.4279	301.6247	293.6408	255.3364	0.0026032491	1.30852	9.45211	8.14359	1338766	1448208_at	8	chr8:81862536-81862882	8 C2	chr8:81862293-81923367	8 C2	RSQ	Mm.223717	NM_008539	1	1	17125		  Smad1	MAD homolog 1 (Drosophila) (Smad1), mRNA.	CTCF: First Multivalent Nuclear Factor	TGF-beta signaling pathway CLASS Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350]	BMP signaling pathway;; BMP signaling pathway;; BMP signaling pathway;; cytoplasm;; gamete generation;; hindbrain development;; homeostatic process;; inflammatory response;; intracellular;; MAPKKK cascade;; mesodermal cell fate commitment;; midbrain development;; negative regulation of cell proliferation;; nucleus;; osteoblast fate commitment;; positive regulation of gene expression;; positive regulation of osteoblast differentiation;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; regulation of transcription from RNA polymerase II promoter;; regulation of transcription, DNA-dependent;; RNA polymerase II transcription factor activity;; transcription;; transcription factor activity;; transcription factor complex;; transforming growth factor beta receptor signaling pathway	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; RNA polymerase II transcription factor activity;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell communication;; cell proliferation;; cellular developmental process;; cellular metabolic process;; embryonic development;; gamete generation;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; nitrogen compound metabolic process;; ossification;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; reproductive process;; response to external stimulus;; response to stress;; sexual reproduction;; tissue remodeling
937.9363	907.0593	917.7051	291.7402	259.9207	266.0375	0.00037990509	1.75811	9.84676	8.08865	1338782	1448231_at	17 13.0 cM	chr17:28537316-28537865	17 A3.3	chr17:28536039-28623057	17 A3.3	RSQ	Mm.276405	NM_010220	1	1	14229		  Fkbp5	FK506 binding protein 5 (Fkbp5), mRNA.			binding;; cytoplasm;; isomerase activity;; nucleus;; peptidyl-prolyl cis-trans isomerase activity;; protein binding;; protein folding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	isomerase activity;; protein binding	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
140.7088	132.2740	130.4158	60.6229	57.3469	54.0472	6.8476556e-05	1.23045	7.07031	5.83986	1348183	1448232_x_at	15	chr15:98868416-98868515	15 F1	chr15:98860321-98868536	15 F1	RSQ	Mm.477500	NM_009448	3	2	22146		  Tuba1c	tubulin, alpha 1C (Tuba1c), mRNA.		Gap junction CLASS Cellular Processes; Cell Communication; Gap junction [PATH:mmu04540]	GTP binding;; GTPase activity;; microtubule;; microtubule-based movement;; microtubule-based process;; nucleotide binding;; protein complex;; protein polymerization;; structural molecule activity	cell;; cell part;; macromolecular complex;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; non-membrane-bounded organelle;; organelle part;; protein complex	binding;; catalytic activity;; structural molecule activity	hydrolase activity;; nucleotide binding	anatomical structure formation;; cellular component biogenesis;; cellular component organization;; cellular process	cellular component assembly;; cellular macromolecular complex subunit organization;; macromolecular complex subunit organization;; microtubule-based process;; protein complex biogenesis
4229.9804	4101.1907	3888.3464	722.9115	1312.3741	874.7988	0.012793634	2.11492	11.99107	9.87615	1338812	1448272_at	1 71.0 cM	chr1:135972093-135972484	1 E4	chr1:135971441-135975732	1 E4	RSQ	Mm.392646	NM_007570	1	1	12227		  Btg2	B-cell translocation gene 2, anti-proliferative (Btg2), mRNA.	BTG family proteins and cell cycle regulation		anterior/posterior pattern formation;; negative regulation of apoptosis;; neuron differentiation;; protein amino acid methylation;; protein binding;; regulation of transcription, DNA-dependent;; response to DNA damage stimulus;; transcription			binding	protein binding	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; biosynthetic process;; cell death;; cellular developmental process;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; pattern specification process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; response to stress
639.9896	589.0408	676.0721	143.7794	116.8419	143.0304	0.00017992311	2.24295	9.30839	7.06544	1338857	1448328_at	5	chr5:34905699-34906233	5 B2	chr5:34892336-34906288	5 B2	RSQ	Mm.5012	NM_001136088	4	1	24055		  Sh3bp2	SH3-domain binding protein 2 (Sh3bp2), transcript variant d, mRNA.		Natural killer cell mediated cytotoxicity CLASS Cellular Processes; Immune System; Natural killer cell mediated cytotoxicity [PATH:mmu04650]	protein binding;; SH3 domain binding			binding	protein binding		
1709.4891	1715.6037	1689.0408	614.3341	808.7623	584.2388	0.011099108	1.36432	10.73528	9.37096	1339017	1448529_at	2 84.0 cM	chr2:148230231-148230761	2 G3	chr2:148230206-148233924	2 G3	RSQ	Mm.24096	NM_009378	1	1	21824	RP23-70N3.2	  Thbd	thrombomodulin (Thbd), mRNA.		Complement and coagulation cascades CLASS Cellular Processes; Immune System; Complement and coagulation cascades [PATH:mmu04610]	binding;; blood coagulation;; calcium ion binding;; embryonic development;; female pregnancy;; integral to membrane;; membrane;; negative regulation of coagulation;; plasma membrane;; receptor activity	cell;; cell part	cell part;; membrane;; membrane part	binding;; molecular transducer activity	ion binding;; signal transducer activity	biological regulation;; developmental process;; multi-organism process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; response to stimulus	coagulation;; embryonic development;; female pregnancy;; multicellular organismal development;; negative regulation of biological process;; negative regulation of multicellular organismal process;; regulation of biological process;; regulation of biological quality;; regulation of body fluid levels;; regulation of multicellular organismal process;; reproductive process;; response to external stimulus;; response to stress
1230.2147	1169.5646	1136.2792	495.1049	180.4638	363.2432	0.047666364	1.88487	10.20218	8.31732	1339177	1448724_at	9 59.0 cM	chr9:107203813-107204254	9 F1	chr9:107199019-107204292	9 F1	RSQ	Mm.4592	NM_009895	1	1	12700		  Cish	cytokine inducible SH2-containing protein (Cish), mRNA.		Jak-STAT signaling pathway CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630]	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;; intracellular signaling cascade;; modification-dependent protein catabolic process;; negative regulation of signal transduction;; plasma membrane;; protein binding;; regulation of growth	cell;; cell part	cell part;; membrane	binding	protein binding	biological regulation;; cellular process;; growth;; metabolic process;; negative regulation of biological process;; regulation of biological process	catabolic process;; cell communication;; cellular metabolic process;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of growth;; regulation of metabolic process;; regulation of molecular function
298.0408	267.8551	293.0408	47.8600	35.7223	41.2122	0.00054135068	2.79171	8.15988	5.36817	1339204	1448756_at	3 43.6 cM	chr3:90496586-90499210	3 F1	chr3:90496554-90499613	3 F1	RSQ	Mm.2128	NM_009114	1	1	20202		  S100a9	S100 calcium binding protein A9 (calgranulin B) (S100a9), mRNA.			actin cytoskeleton reorganization;; calcium ion binding;; leukocyte chemotaxis;; regulation of integrin biosynthetic process			binding	ion binding	biological regulation;; cellular component organization;; cellular process;; immune system process;; localization;; locomotion;; metabolic process;; regulation of biological process;; response to stimulus	actin filament-based process;; behavior;; biosynthetic process;; cell motility;; cell motion;; cellular response to stimulus;; leukocyte migration;; localization of cell;; macromolecule metabolic process;; membrane organization;; organelle organization;; regulation of biological process;; regulation of cellular component organization;; regulation of cellular process;; regulation of metabolic process;; response to chemical stimulus;; response to external stimulus;; taxis
1971.4966	1773.0059	2009.9297	204.7138	348.6047	639.0388	0.03470996	2.42244	10.90333	8.48089	1348292	1448793_a_at	2 94.0 cM	chr2:164251028-164251505	2 H3	chr2:164249746-164268688	2 H3	RSQ	Mm.477724	NM_011521	1	1	20971	RP23-462O16.6	  Sdc4	syndecan 4 (Sdc4), mRNA.		Cell adhesion molecules (CAMs) CLASS Environmental Information Processing; Signaling Molecules and Interaction; ECM-receptor interaction [PATH:mmu04512] Environmental Information Processing; Signaling Molecules and Interaction; Cell adhesion molecules (CAMs) [PATH:mmu04514];; ECM-receptor interaction	cell surface;; cytoskeletal protein binding;; integral to membrane;; membrane	cell;; cell part	cell part;; cell surface;; membrane;; membrane part	binding	protein binding		
5293.7720	5588.1837	5506.6385	1854.0559	2458.4886	1991.9136	0.0061461756	1.38841	12.41507	11.02665	1339463	1449073_at	6 8.5 cM	chr6:29411311-29411636	6 A3.3	chr6:29383152-29411888	6 A3.3	RSQ	Mm.39046	NM_001081185	1	1	68794		  Flnc	filamin C, gamma (Flnc), mRNA.		Focal adhesion CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Cellular Processes; Cell Communication; Focal adhesion [PATH:mmu04510];; MAPK signaling pathway	actin binding;; actin cytoskeleton;; actin filament-based process;; cytoplasm;; cytoskeleton;; membrane;; muscle fiber development	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; non-membrane-bounded organelle	binding	protein binding	cellular process;; developmental process;; multicellular organismal process	actin filament-based process;; anatomical structure development;; cellular developmental process;; multicellular organismal development
1357.4297	1401.0964	1387.2701	508.1839	638.2004	739.6995	0.017572764	1.15306	10.43235	9.27929	1339476	1449089_at	16	chr16:76291166-76291540	16 C3.1	chr16:76291106-76373294	16 C3.1	RSQ	Mm.455873	NM_173440	1	1	268903		  Nrip1	nuclear receptor interacting protein 1 (Nrip1), mRNA.			histone deacetylase binding;; histone deacetylase complex;; lipid storage;; negative regulation of transcription from RNA polymerase II promoter;; nucleus;; ovarian follicle rupture;; ovulation;; protein binding;; receptor activity;; receptor binding;; regulation of transcription, DNA-dependent;; retinoid X receptor binding;; transcription;; transcription corepressor activity	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; molecular transducer activity;; transcription regulator activity	protein binding;; signal transducer activity;; transcription cofactor activity;; transcription repressor activity	biological regulation;; cellular process;; developmental process;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; rhythmic process	anatomical structure development;; biosynthetic process;; cellular metabolic process;; gamete generation;; macromolecule localization;; macromolecule metabolic process;; multicellular organism reproduction;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; ovulation cycle;; ovulation cycle process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; reproductive developmental process;; reproductive process;; reproductive process in a multicellular organism;; sexual reproduction
472.4270	433.4186	474.8078	231.8657	185.9429	203.6540	0.0019458581	1.15631	8.84492	7.68861	1339494	1449109_at	10 52.0 cM	chr10:94875126-94875560	10 C2	chr10:94874675-94879455	10 C2	RSQ	Mm.474283	NM_007706	3	3	216233		  Socs2	suppressor of cytokine signaling 2 (Socs2), mRNA.		Insulin signaling pathway;; Jak-STAT signaling pathway;; Type II diabetes mellitus CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910] Human Diseases; Metabolic Disorders; Type II diabetes mellitus [PATH:mmu04930]	growth hormone receptor binding;; intracellular signaling cascade;; lactation;; lactation;; mammary gland alveolus development;; mammary gland alveolus development;; modification-dependent protein catabolic process;; negative regulation of JAK-STAT cascade;; negative regulation of multicellular organism growth;; negative regulation of multicellular organism growth;; negative regulation of signal transduction;; positive regulation of neuron differentiation;; regulation of growth;; regulation of multicellular organism growth			binding	protein binding	biological regulation;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; catabolic process;; cell communication;; cellular developmental process;; cellular metabolic process;; macromolecule metabolic process;; multicellular organism growth;; multicellular organism reproduction;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of growth;; negative regulation of multicellular organismal process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of growth;; regulation of multicellular organismal process;; reproductive process;; reproductive process in a multicellular organism
780.2635	668.3992	692.9613	256.3480	266.2402	213.4880	0.00041544803	1.54415	9.47634	7.93219	1339561	1449188_at	10	chr10:79620535-79621046	10 C1	chr10:79611034-79621112	10 C1	RSQ	Mm.143813	NM_021565	1	1	59090		  Midn	midnolin (Midn), mRNA.			nucleolus;; nucleus	cell;; cell part;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle lumen;; organelle part				
205.7295	232.4871	211.9745	64.7201	91.0691	109.3914	0.021986489	1.32499	7.75779	6.43280	1339662	1449311_at	16 C3.3	chr16:87730397-87730943	16 C3.3			UGA	Mm.26147				12013		  Bach1	BTB and CNC homology 1 (Bach1), mRNA			DNA binding;; nucleus;; protein binding;; protein dimerization activity;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
131.0401	129.7113	119.1671	52.5747	48.2263	48.3011	2.3441936e-05	1.34928	6.98329	5.63401	1339699	1449360_at	15 43.3 cM	chr15:78112991-78113449	15 E1	chr15:78112939-78128810	15 E1	RSQ	Mm.1940	NM_007781	1	1	12984		  Csf2rb2	colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) (Csf2rb2), mRNA.	Regulation of BAD phosphorylation	Apoptosis;; Cytokine-cytokine receptor interaction;; Jak-STAT signaling pathway CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060] Cellular Processes; Cell Growth and Death; Apoptosis [PATH:mmu04210]	cytokine receptor activity;; cytokine-mediated signaling pathway;; integral to membrane;; membrane;; receptor activity	cell;; cell part	cell part;; membrane;; membrane part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
2059.0425	2041.1732	1989.7122	329.2998	907.7075	586.1713	0.04804646	1.85892	10.98709	9.12817	1339701	1449363_at	1 103.2 cM	chr1:192994277-192994768	1 H6	chr1:192994174-193007212	1 H6	RSQ	Mm.2706	NM_007498	1	1	11910		  Atf3	activating transcription factor 3 (Atf3), mRNA.			DNA binding;; gluconeogenesis;; nucleus;; protein dimerization activity;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; transcription;; transcription factor activity;; transcription factor complex;; transcription repressor activity	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity;; transcription repressor activity	biological regulation;; cellular process;; metabolic process;; regulation of biological process	alcohol metabolic process;; biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
1441.2160	1450.5048	1459.3252	419.6539	284.7226	238.2511	0.011280511	2.24790	10.50217	8.25427	1339832	1449519_at	6	chr6:66985453-66985671	6 C1	chr6:66985089-66987401	6 C1	RSQ	Mm.389750	NM_007836	1	1	13197		  Gadd45a	growth arrest and DNA-damage-inducible 45 alpha (Gadd45a), mRNA.	ATM Signaling Pathway;; Cell Cycle: G2/M Checkpoint;; p53 Signaling Pathway	Cell cycle;; MAPK signaling pathway;; p53 signaling pathway CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Cellular Processes; Cell Growth and Death; Cell cycle [PATH:mmu04110] Cellular Processes; Cell Growth and Death; p53 signaling pathway [PATH:mmu04115]	cell cycle;; cell cycle arrest;; centrosome cycle;; negative regulation of protein kinase activity;; nucleus;; protein binding;; regulation of cell cycle;; response to DNA damage stimulus	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	protein binding	biological regulation;; cellular component organization;; cellular process;; metabolic process;; regulation of biological process;; response to stimulus	cell cycle;; cell cycle process;; cellular metabolic process;; microtubule-based process;; organelle organization;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of molecular function;; response to stress
1344.6797	1323.8787	1305.1138	722.2324	744.6637	522.1836	0.024468501	1.01613	10.37119	9.35506	1348480	1449731_s_at	12	chr12:56590515-56590785	12 C1	chr12:56590395-56593634	12 C1	RSQ	Mm.170515	NM_010907	1	1	18035		  Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (Nfkbia), mRNA.	Acetylation and Deacetylation of RelA in The Nucleus;; Activation of PKC through G protein coupled receptor;; AKT Signaling Pathway;; ATM Signaling Pathway;; Cadmium induces DNA synthesis and proliferation in macrophages;; CD40L Signaling Pathway;; Double Stranded RNA Induced Gene Expression;; Erythropoietin mediated neuroprotection through NF-kB;; fMLP induced chemokine gene expression in HMC-1 cells;; HIV-I Nef: negative effector of Fas and TNF;; Induction of apoptosis through DR3 and DR4/5 Death Receptors;; Influence of Ras and Rho proteins on G1 to S Transition;; Keratinocyte Differentiation;; MAPKinase Signaling Pathway;; Neuropeptides VIP and PACAP inhibit the apoptosis of activated T cells;; NF-kB Signaling Pathway;; NFkB activation by Nontypeable Hemophilus influenzae;; Signal transduction through IL1R;; T Cell Receptor Signaling Pathway;; The 4-1BB-dependent immune response;; TNF/Stress Related Signaling;; TNFR2 Signaling Pathway;; Toll-Like Receptor Pathway	Adipocytokine signaling pathway;; Apoptosis;; B cell receptor signaling pathway;; Chemokine signaling pathway;; Chronic myeloid leukemia;; Neurotrophin signaling pathway;; Pathways in cancer;; Prostate cancer;; Small cell lung cancer CLASS Cellular Processes; Cell Growth and Death; Apoptosis [PATH:mmu04210] Cellular Processes; Endocrine System; Adipocytokine signaling pathway [PATH:mmu04920] Cellular Processes; Immune System; Toll-like receptor signaling pathway [PATH:mmu04620] Cellular Processes; Immune System; T cell receptor signaling pathway [PATH:mmu04660;; T cell receptor signaling pathway;; Toll-like receptor signaling pathway	cytoplasm;; cytosol;; lipopolysaccharide-mediated signaling pathway;; negative regulation of myeloid cell differentiation;; negative regulation of NF-kappaB transcription factor activity;; negative regulation of Notch signaling pathway;; NF-kappaB binding;; nucleotide-binding oligomerization domain containing 1 signaling pathway;; nucleotide-binding oligomerization domain containing 2 signaling pathway;; nucleus;; protein import into nucleus, translocation;; regulation of cell proliferation;; response to exogenous dsRNA;; response to lipopolysaccharide;; response to muramyl dipeptide;; toll-like receptor 4 signaling pathway	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	protein binding	biological regulation;; cellular process;; developmental process;; establishment of localization;; immune system process;; localization;; metabolic process;; multi-organism process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	activation of immune response;; anatomical structure development;; biosynthetic process;; cell communication;; cell proliferation;; cellular developmental process;; cellular localization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; establishment of protein localization;; immune response;; immune system development;; macromolecule localization;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of immune system process;; positive regulation of response to stimulus;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of metabolic process;; regulation of molecular function;; regulation of multicellular organismal process;; regulation of response to stimulus;; regulation of transcription regulator activity;; response to biotic stimulus;; response to chemical stimulus;; response to other organism;; response to stress;; transport
435.5230	427.4124	400.0377	67.9608	81.2033	74.3901	9.170108e-05	2.50098	8.71669	6.21571	1348516	1449901_a_at	4	chr4:132807657-132808759	4 D2.3	chr4:132796732-132808843	4 D2.3	RSQ	Mm.36640	NM_016693	1	1	53608		  Map3k6	mitogen-activated protein kinase kinase kinase 6 (Map3k6), mRNA.	MAPKinase Signaling Pathway	MAPK signaling pathway CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010]	ATP binding;; kinase activity;; magnesium ion binding;; MAP kinase kinase kinase activity;; metal ion binding;; nucleotide binding;; protein amino acid phosphorylation;; protein binding;; protein kinase activity;; protein serine/threonine kinase activity;; transferase activity			binding;; catalytic activity;; molecular transducer activity	ion binding;; nucleoside binding;; nucleotide binding;; protein binding;; signal transducer activity;; transferase activity	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
106.6690	107.0012	126.8132	60.6148	42.4420	56.0859	0.0078711707	1.10882	6.82168	5.71286	1340074	1449906_at	1 86.6 cM	chr1:166074030-166079220	1 H2.2	chr1:166053831-166079876	1 H2.2	RSQ	Mm.3337	NM_011347	1	1	20344		  Selp	selectin, platelet (Selp), mRNA.	Eph Kinases and ephrins support platelet aggregation;; Monocyte and its Surface Molecules	Cell adhesion molecules (CAMs) CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cell adhesion molecules (CAMs) [PATH:mmu04514]	binding;; calcium-dependent protein binding;; cell adhesion;; external side of plasma membrane;; glycoprotein binding;; heterophilic cell adhesion;; inflammatory response;; integral to membrane;; leukocyte adhesion;; leukocyte tethering or rolling;; membrane;; membrane fraction;; platelet alpha granule membrane;; protein binding;; sialic acid binding;; sugar binding	cell;; cell part;; organelle;; organelle part	cell fraction;; cell part;; cell surface;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part;; vesicle	binding	carbohydrate binding;; protein binding	biological adhesion;; cellular process;; immune system process;; localization;; locomotion;; response to stimulus	cell adhesion;; cell motility;; cell motion;; leukocyte migration;; localization of cell;; response to external stimulus;; response to stress
40.5499	57.1793	33.6230	15.0211	16.1647	18.6145	0.015315876	1.36945	5.41681	4.04735	1340126	1449984_at	5 E1|5 51.0 cM					UGA	Mm.4979				20310		  Cxcl2	Chemokine (C-X-C motif) ligand 2 (Cxcl2), mRNA		Chemokine signaling pathway CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060] Cellular Processes; Immune System; Chemokine signaling pathway [PATH:mmu04062];; Cytokine-cytokine receptor interaction	chemokine activity;; chemotaxis;; cytokine activity;; extracellular region;; extracellular space;; immune response;; inflammatory response	extracellular region;; extracellular region part	extracellular region part;; extracellular space	binding	protein binding	immune system process;; locomotion;; response to stimulus	behavior;; immune response;; response to chemical stimulus;; response to external stimulus;; response to stress;; taxis
179.4111	194.3186	248.1804	104.7680	95.1803	96.5508	0.011682809	1.05593	7.68155	6.62562	1348550	1450018_s_at	14 D2	chr14:76160898-76161380	14 D3			UGA	Mm.46067				67554		  Slc25a30	Solute carrier family 25, member 30, mRNA (cDNA clone MGC:31367 IMAGE:4238839)			binding;; integral to membrane;; membrane;; mitochondrial inner membrane;; mitochondrion;; transport;; transporter activity	cell;; cell part;; envelope;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle envelope;; organelle membrane;; organelle part	binding;; transporter activity		establishment of localization;; localization	establishment of localization;; transport
230.7012	204.0335	204.7762	99.9998	93.9055	105.8698	0.00016309978	1.09244	7.73348	6.64105	1340492	1450511_at	4 26.3 cM	chr4:58386625-58387120	4 B3	chr4:58298833-58387314	4 B3	RSQ	Mm.16148	NM_001037130	5	1	18198	RP23-170A3.1	  Musk	muscle, skeletal, receptor tyrosine kinase (Musk), transcript variant 5, mRNA.	Agrin in Postsynaptic Differentiation;; Role of nicotinic acetylcholine receptors in the regulation of apoptosis		ATP binding;; integral to membrane;; integral to plasma membrane;; kinase activity;; membrane;; neuromuscular junction;; neuromuscular junction development;; nucleotide binding;; plasma membrane;; protein amino acid phosphorylation;; protein binding;; protein kinase activity;; protein serine/threonine kinase activity;; protein tyrosine kinase activity;; receptor activity;; receptor clustering;; receptor clustering;; regulation of synaptic growth at neuromuscular junction;; regulation of transcription, DNA-dependent;; transferase activity;; transmembrane receptor protein tyrosine kinase activity	cell;; cell part;; synapse	cell part;; membrane;; membrane part;; neuromuscular junction	binding;; catalytic activity;; molecular transducer activity	nucleoside binding;; nucleotide binding;; protein binding;; signal transducer activity;; transferase activity	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; biosynthetic process;; cell communication;; cellular component assembly;; cellular developmental process;; cellular macromolecular complex subunit organization;; cellular metabolic process;; developmental growth;; extracellular structure organization;; macromolecular complex subunit organization;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; primary metabolic process;; protein complex biogenesis;; regulation of biological process;; regulation of biological quality;; regulation of cellular component biogenesis;; regulation of cellular component organization;; regulation of cellular process;; regulation of developmental process;; regulation of growth;; regulation of metabolic process;; regulation of multicellular organismal process;; synaptogenesis;; system process
358.2277	371.8831	344.6403	101.7634	102.7790	125.7799	0.0016123551	1.70838	8.48413	6.77574	1340635	1450698_at	2	chr2:127163556-127163826	2 F1	chr2:127161894-127164113	2 F1	RSQ	Mm.4729	NM_010090	1	1	13537	RP23-206D14.6	  Dusp2	dual specificity phosphatase 2 (Dusp2), mRNA.	Regulation of MAP Kinase Pathways Through Dual Specificity Phosphatases	MAPK signaling pathway CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010]	dephosphorylation;; hydrolase activity;; MAP kinase tyrosine/serine/threonine phosphatase activity;; mitogen-activated protein kinase binding;; nucleus;; phosphatase activity;; phosphoprotein phosphatase activity;; protein amino acid dephosphorylation;; protein tyrosine phosphatase activity;; protein tyrosine/serine/threonine phosphatase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	hydrolase activity;; protein binding	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
1411.9536	1425.8560	1435.1444	462.7012	460.5133	568.4920	0.0041427391	1.52535	10.47602	8.95068	1340651	1450716_at	16 53.4 cM	chr16:85794592-85794942	16 C3.3	chr16:85794071-85803360	16 C3.3	RSQ	Mm.1421	NM_009621	1	1	11504		  Adamts1	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 (Adamts1), mRNA.			basement membrane;; cytoplasmic vesicle;; extracellular matrix;; extracellular region;; heart trabecula formation;; heparin binding;; hydrolase activity;; kidney development;; metal ion binding;; metalloendopeptidase activity;; metalloendopeptidase activity;; metalloendopeptidase activity;; metallopeptidase activity;; negative regulation of angiogenesis;; ovulation from ovarian follicle;; peptidase activity;; protein binding;; proteinaceous extracellular matrix;; proteolysis;; zinc ion binding	cell;; cell part;; extracellular region;; extracellular region part;; organelle	cell part;; extracellular matrix;; extracellular matrix part;; extracellular region part;; intracellular;; intracellular organelle;; intracellular part;; vesicle	binding;; catalytic activity	carbohydrate binding;; hydrolase activity;; ion binding;; pattern binding;; protein binding	anatomical structure formation;; biological regulation;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; rhythmic process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; catabolic process;; gamete generation;; macromolecule metabolic process;; multicellular organism reproduction;; multicellular organismal development;; negative regulation of biological process;; negative regulation of developmental process;; ovulation cycle;; ovulation cycle process;; primary metabolic process;; regulation of biological process;; regulation of developmental process;; regulation of multicellular organismal process;; reproductive developmental process;; reproductive process;; reproductive process in a multicellular organism;; sexual reproduction
371.2759	321.0158	342.5746	179.8279	163.5244	157.4904	0.00023550252	1.04672	8.42771	7.38099	1340684	1450759_at	13 A3.3|13 20.0 cM	chr13:38591469-38591997	13 A3.3			UG5	Mm.385759				12161		  Bmp6	Bone morphogenetic protein 6 (Bmp6), mRNA		Hedgehog signaling pathway;; TGF-beta signaling pathway CLASS Environmental Information Processing; Signal Transduction; Hedgehog signaling pathway [PATH:mmu04340] Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PAT	BMP signaling pathway;; cartilage development;; cell differentiation;; cytokine activity;; extracellular region;; extracellular space;; growth;; growth factor activity;; inflammatory response;; multicellular organismal development;; ossification;; osteoblast differentiation;; protein binding	extracellular region;; extracellular region part	extracellular region part;; extracellular space	binding	protein binding	biological regulation;; cellular process;; developmental process;; growth;; multicellular organismal process;; regulation of biological process;; response to stimulus	anatomical structure development;; cell communication;; cellular developmental process;; multicellular organismal development;; ossification;; regulation of biological process;; regulation of cellular process;; response to external stimulus;; response to stress
647.2192	579.5104	701.8720	188.9717	183.5334	181.4054	0.0013118147	1.79562	9.32396	7.52833	1348775	1450826_a_at	7 23.5 cM	chr7:53967388-53967984	7 B4	chr7:53967367-53971046	7 B4	RSQ	Mm.14277	NM_011315	1	1	20210		  Saa3	serum amyloid A 3 (Saa3), mRNA.			acute-phase response;; extracellular region;; high-density lipoprotein particle	extracellular region;; extracellular region part;; macromolecular complex	extracellular region part;; extracellular space;; plasma lipoprotein particle;; protein-lipid complex			response to stimulus	response to external stimulus;; response to stress
627.2333	643.6571	628.5221	191.6381	211.9297	180.3432	0.0011904982	1.70485	9.30628	7.60143	1348802	1450922_a_at	1 101.5 cM	chr1:188448391-188448651	1 H5	chr1:188447064-188529871	1 H5	RSQ	Mm.18213	NM_009367	1	1	21808		  Tgfb2	transforming growth factor, beta 2 (Tgfb2), mRNA.		Cell cycle;; Chronic myeloid leukemia CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu0;; Colorectal cancer;; Cytokine-cytokine receptor interaction;; MAPK signaling pathway;; Pancreatic cancer;; Pathways in cancer;; Renal cell carcinoma;; TGF-beta signaling pathway	activation-induced cell death of T cells;; axon;; axon guidance;; blood vessel development;; blood vessel remodeling;; cartilage condensation;; cell growth;; cell proliferation;; cell soma;; dopamine biosynthetic process;; extracellular matrix organization;; extracellular region;; extracellular space;; growth;; growth factor activity;; hair follicle development;; hair follicle morphogenesis;; heart development;; hemopoiesis;; induction of apoptosis;; negative regulation of keratinocyte differentiation;; neuron development;; neuron fate commitment;; pathway-restricted SMAD protein phosphorylation;; positive regulation of cell cycle;; protein binding;; regulation of apoptosis;; skeletal system development;; somatic stem cell division;; transforming growth factor beta receptor binding	cell;; cell part;; extracellular region;; extracellular region part	cell part;; cell projection;; cell soma;; extracellular region part;; extracellular space	binding	protein binding	biological adhesion;; biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; growth;; immune system process;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process	alcohol metabolic process;; anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell adhesion;; cell communication;; cell cycle;; cell death;; cell division;; cell growth;; cell motion;; cell projection organization;; cell proliferation;; cellular component morphogenesis;; cellular developmental process;; cellular metabolic process;; extracellular structure organization;; immune system development;; leukocyte homeostasis;; localization of cell;; macromolecule metabolic process;; molting cycle;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process;; tissue remodeling
301.1696	351.7740	350.3053	129.8592	139.3636	145.2075	0.00035072531	1.27331	8.38180	7.10850	1340805	1450923_at	1 101.5 cM	chr1:188447467-188447940	1 H5	chr1:188447064-188529871	1 H5	RSQ	Mm.18213	NM_009367	1	1	21808		  Tgfb2	transforming growth factor, beta 2 (Tgfb2), mRNA.		Cell cycle;; Chronic myeloid leukemia CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu0;; Colorectal cancer;; Cytokine-cytokine receptor interaction;; MAPK signaling pathway;; Pancreatic cancer;; Pathways in cancer;; Renal cell carcinoma;; TGF-beta signaling pathway	activation-induced cell death of T cells;; axon;; axon guidance;; blood vessel development;; blood vessel remodeling;; cartilage condensation;; cell growth;; cell proliferation;; cell soma;; dopamine biosynthetic process;; extracellular matrix organization;; extracellular region;; extracellular space;; growth;; growth factor activity;; hair follicle development;; hair follicle morphogenesis;; heart development;; hemopoiesis;; induction of apoptosis;; negative regulation of keratinocyte differentiation;; neuron development;; neuron fate commitment;; pathway-restricted SMAD protein phosphorylation;; positive regulation of cell cycle;; protein binding;; regulation of apoptosis;; skeletal system development;; somatic stem cell division;; transforming growth factor beta receptor binding	cell;; cell part;; extracellular region;; extracellular region part	cell part;; cell projection;; cell soma;; extracellular region part;; extracellular space	binding	protein binding	biological adhesion;; biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; growth;; immune system process;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process	alcohol metabolic process;; anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell adhesion;; cell communication;; cell cycle;; cell death;; cell division;; cell growth;; cell motion;; cell projection organization;; cell proliferation;; cellular component morphogenesis;; cellular developmental process;; cellular metabolic process;; extracellular structure organization;; immune system development;; leukocyte homeostasis;; localization of cell;; macromolecule metabolic process;; molting cycle;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of multicellular organismal process;; tissue remodeling
1911.5043	1968.7630	1895.6206	490.9640	531.4408	556.4862	0.00029070513	1.87286	10.91067	9.03781	1348818	1451021_a_at	14	chr14:99701186-99702697	14 E2.2	chr14:99697909-99712631	14 E2.2	RSQ	Mm.30262	NM_009769	1	1	12224		  Klf5	Kruppel-like factor 5 (Klf5), mRNA.			angiogenesis;; DNA binding;; DNA binding;; intracellular;; metal ion binding;; microvillus assembly;; nucleic acid binding;; nucleus;; positive regulation of transcription;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; transcription factor activity;; transcription factor activity;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	ion binding;; nucleic acid binding;; protein binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell projection organization;; cellular component assembly;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
393.1568	353.1681	302.2436	163.5986	157.8821	172.6896	0.0056803601	1.07799	8.44091	7.36292	1340893	1451027_at	11	chr11:119862181-119862738	11 E2	chr11:119804405-119863932	11 E2	RSQ	Mm.197534	NM_130862	2	1	108100	RP23-390H16.1	  Baiap2	brain-specific angiogenesis inhibitor 1-associated protein 2 (Baiap2), transcript variant 2, mRNA.	Rho cell motility signaling pathway	Adherens junction;; Regulation of actin cytoskeleton CLASS Cellular Processes; Cell Motility; Regulation of actin cytoskeleton [PATH:mmu04810] Cellular Processes; Cell Communication; Adherens junction [PATH:mmu04520]	cell projection;; cytoplasm;; cytoskeletal adaptor activity;; filopodium assembly;; membrane;; protein binding;; Rho protein signal transduction;; SH3 domain binding;; signal transduction	cell;; cell part	cell part;; cell projection;; intracellular;; intracellular part;; membrane	binding	molecular adaptor activity;; protein binding	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; regulation of biological process	cell communication;; cell projection organization;; cellular component assembly;; regulation of biological process;; regulation of cellular process
519.6935	634.6367	557.1505	213.8036	177.6748	169.2024	0.00032791091	1.61246	9.15108	7.53861	1341119	1451355_at	4	chr4:86566201-86566728	4 C4	chr4:86520367-86566779	4 C4	RSQ	Mm.45019	NM_139306	1	1	230379	RP24-468M3.3	  Acer2	alkaline ceramidase 2 (Acer2), mRNA.		Metabolic pathways CLASS Metabolism; Lipid Metabolism; Sphingolipid metabolism [PATH:mmu00600];; Sphingolipid metabolism	ceramidase activity;; ceramide metabolic process;; endoplasmic reticulum membrane;; Golgi apparatus;; Golgi membrane;; hydrolase activity;; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;; integral to membrane;; lipid metabolic process;; membrane	cell;; cell part;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	catalytic activity	hydrolase activity	cellular process;; metabolic process	cellular metabolic process;; primary metabolic process
655.1137	677.4130	641.7253	253.7721	341.0802	353.8710	0.017681915	1.07229	9.36177	8.28948	1341207	1451478_at	4 E1	chr4:147869405-147869840	4 E2			UG5	Mm.388929				654812	RP23-423L9.2	  Angptl7	Angiopoietin-like 7, mRNA (cDNA clone MGC:32448 IMAGE:5043159)			extracellular region;; receptor binding;; signal transduction	extracellular region		binding	protein binding	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
322.3589	348.6978	288.6527	136.2647	138.0779	158.1350	0.00043507822	1.14898	8.31718	7.16821	1341279	1451569_at	6 D1	chr6:92118495-92118956	6 D1			UGA	Mm.87062				22026		  Nr2c2	CD-1 orphan receptor TAK1 (TAK1)			DNA binding;; ligand-dependent nuclear receptor activity;; metal ion binding;; nucleus;; receptor activity;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; spermatocyte division;; spermatogenesis;; spermatogenesis;; steroid hormone receptor activity;; transcription;; transcription factor activity;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; molecular transducer activity;; transcription regulator activity	ion binding;; nucleic acid binding;; signal transducer activity;; transcription factor activity	biological regulation;; cellular process;; developmental process;; metabolic process;; regulation of biological process;; reproduction;; reproductive process	biosynthetic process;; cell division;; cell proliferation;; cellular developmental process;; cellular metabolic process;; gamete generation;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; reproductive process;; sexual reproduction
1414.2219	1398.2630	1416.4771	567.6845	719.8648	603.9091	0.0074764989	1.16820	10.46110	9.29291	1341282	1451577_at	16 B4|16 28.9 cM	chr16:43619340-43619721	16 B4			UGA	Mm.440824				56490	RP23-283M18.1	  Zbtb20	Zinc finger and BTB domain containing 20, mRNA (cDNA clone MGC:35911 IMAGE:4971586)			DNA binding;; intracellular;; metal ion binding;; nucleic acid binding;; nucleus;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding;; protein binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
141.2707	149.2577	160.7181	72.0641	71.2836	66.6346	0.00018509136	1.10249	7.23079	6.12830	1348987	1451596_a_at	11 E2	chr11:116397391-116397921	11 E2			UG5	Mm.20944				20698	RP23-193A16.4	  Sphk1	Sphingosine kinase 1, mRNA (cDNA clone MGC:47288 IMAGE:4221357)	Phospholipids as signalling intermediaries	Calcium signaling pathway;; Metabolic pathways;; Sphingolipid metabolism;; VEGF signaling pathway CLASS Metabolism; Lipid Metabolism; Sphingolipid metabolism [PATH:mmu00600] Environmental Information Processing; Signal Transduction; VEGF signaling pathway [PATH:mmu04370] Environmental Information Processing; Signal Transduction; Calcium signaling pathway [PATH:mmu04020]	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;; ATP binding;; blood vessel development;; brain development;; calmodulin binding;; cytoplasm;; diacylglycerol kinase activity;; DNA binding;; inflammatory response;; kinase activity;; membrane fraction;; negative regulation of apoptosis;; nucleotide binding;; positive regulation of cell proliferation;; positive regulation of fibroblast proliferation;; regulation of interleukin-1 beta production;; soluble fraction;; sphinganine kinase activity;; sphinganine kinase activity;; transferase activity	cell;; cell part	cell fraction;; cell part;; intracellular;; intracellular part	binding;; catalytic activity	nucleic acid binding;; nucleoside binding;; nucleotide binding;; protein binding;; transferase activity	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; cell communication;; cell death;; cell proliferation;; cellular metabolic process;; cytokine production;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; positive regulation of biological process;; positive regulation of cellular process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of molecular function;; regulation of multicellular organismal process;; response to external stimulus;; response to stress
491.4297	469.7440	450.4501	58.3130	60.2290	52.2288	1.5708628e-05	3.04896	8.87727	5.82830	1341305	1451612_at	8 C5|8 45.0 cM	chr8:96703143-96703979	8 C5			UGA	Mm.192991				17748		  Mt1	Metallothionein 1, mRNA (cDNA clone MGC:47147 IMAGE:4990006)			cellular metal ion homeostasis;; cellular zinc ion homeostasis;; copper ion binding;; cytosol;; detoxification of copper ion;; lysosome;; metal ion binding;; nitric oxide mediated signal transduction;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding	biological regulation;; cellular process;; regulation of biological process;; response to stimulus	cell communication;; cellular homeostasis;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; response to chemical stimulus
1092.1301	1065.3775	1251.1932	600.3029	536.7532	511.1632	0.00046621924	1.04795	10.14639	9.09843	1348997	1451628_a_at	10 38.0 cM	chr10:69486782-69487344	10 B5.3	chr10:68996455-69490184	10 B5.3	RSQ	Mm.235960	NM_170730	9	1	11735		  Ank3	ankyrin 3, epithelial (Ank3), transcript variant 9, mRNA.			axon;; axon guidance;; membrane fraction;; protein binding;; protein binding;; synapse;; synapse organization	cell;; cell part;; synapse	cell fraction;; cell part;; cell projection	binding	protein binding	cellular component organization;; cellular process;; developmental process;; localization;; multicellular organismal process	anatomical structure development;; anatomical structure morphogenesis;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; extracellular structure organization;; localization of cell;; multicellular organismal development
403.4822	430.6428	413.8841	137.4298	156.3615	151.3066	0.00019769304	1.48906	8.69993	7.21087	1341319	1451634_at	17 7.36 cM	chr17:13007636-13008080	17 A1	chr17:12934176-13008423	17 A1	RSQ		NR_002853	2	1	104103		  Airn	antisense Igf2r RNA (Airn), transcript variant 1, non-coding RNA.			genetic imprinting					biological regulation;; cellular process;; metabolic process;; regulation of biological process	cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of metabolic process
4180.2906	4203.4998	4195.7075	582.9237	744.5343	839.1176	0.0036417059	2.55379	12.03382	9.48003	1341347	1451680_at	2	chr2:151935283-151935614	2 G3	chr2:151931465-151937089	2 G3	RSQ	Mm.218639	NM_029688	1	1	76650		  Srxn1	sulfiredoxin 1 homolog (S. cerevisiae) (Srxn1), mRNA.			antioxidant activity;; ATP binding;; cytoplasm;; cytosol;; magnesium ion binding;; nucleotide binding;; oxidation reduction;; oxidoreductase activity;; response to oxidative stress;; sulfiredoxin activity	cell;; cell part	cell part;; intracellular;; intracellular part	antioxidant activity;; binding;; catalytic activity	ion binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity	metabolic process;; response to stimulus	oxidation reduction;; response to chemical stimulus;; response to stress
351.4852	390.0426	342.2789	129.3800	117.5628	98.9141	0.0010369686	1.65433	8.49461	6.84029	1341364	1451715_at	2 91.0 cM	chr2:160191130-160191719	2 H2	chr2:160189412-160192801	2 H2	RSQ	Mm.330745	NM_010658	1	1	16658	RP23-333A18.1	  Mafb	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) (Mafb), mRNA.			brain segmentation;; DNA binding;; inner ear morphogenesis;; nucleus;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; regulation of transcription from RNA polymerase II promoter;; regulation of transcription, DNA-dependent;; respiratory gaseous exchange;; rhombomere 5 development;; rhombomere 6 development;; segment specification;; sequence-specific DNA binding;; transcription;; transcription factor activity;; transcription factor complex	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cellular metabolic process;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; pattern specification process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; respiratory gaseous exchange
715.7394	690.2579	665.3594	341.1308	278.8834	265.8186	0.0050867127	1.23342	9.43076	8.19733	1341365	1451716_at	2 H2|2 91.0 cM	chr2:160189869-160190403	2 H2			UG5	Mm.330745				16658	RP23-333A18.1	  Mafb	V-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) (Mafb), mRNA			brain segmentation;; DNA binding;; inner ear morphogenesis;; nucleus;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; regulation of transcription from RNA polymerase II promoter;; regulation of transcription, DNA-dependent;; respiratory gaseous exchange;; rhombomere 5 development;; rhombomere 6 development;; segment specification;; sequence-specific DNA binding;; transcription;; transcription factor activity;; transcription factor complex	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; transcription factor activity	biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cellular metabolic process;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; pattern specification process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; respiratory gaseous exchange
103.5565	98.2182	107.1181	35.5372	41.6785	56.1464	0.020552496	1.23721	6.68508	5.44787	1341382	1451739_at	14 E2.2	chr14:99704096-99704548	14 E2.2			UGA	Mm.30262				12224		  Klf5	Kruppel-like factor 5, mRNA (cDNA clone MGC:13705 IMAGE:4208633)			angiogenesis;; DNA binding;; DNA binding;; intracellular;; metal ion binding;; microvillus assembly;; nucleic acid binding;; nucleus;; positive regulation of transcription;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; transcription factor activity;; transcription factor activity;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	ion binding;; nucleic acid binding;; protein binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell projection organization;; cellular component assembly;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
1322.7983	1261.2579	1256.2077	474.1454	547.1144	481.6064	0.00080735403	1.35610	10.32163	8.96553	1341390	1451756_at	5 G|5 82.0 cM	chr5:148449686-148450062	5 G3			UGA	Mm.389712				14254		  Flt1	FMS-like tyrosine kinase 1, mRNA (cDNA clone MGC:36074 IMAGE:5368921)		Cytokine-cytokine receptor interaction;; Endocytosis;; Focal adhesion CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060] Cellular Processes; Transport and Catabolism; Endocytosis [PATH:mmu04144] Cellular Processes; Cell Communication; Focal adhesion [PATH:mmu04510]	angiogenesis;; ATP binding;; cell differentiation;; cell migration;; identical protein binding;; integral to membrane;; kinase activity;; membrane;; multicellular organismal development;; nucleotide binding;; patterning of blood vessels;; protein amino acid phosphorylation;; protein kinase activity;; protein tyrosine kinase activity;; receptor activity;; transferase activity;; transmembrane receptor protein tyrosine kinase activity;; transmembrane receptor protein tyrosine kinase signaling pathway;; vascular endothelial growth factor receptor activity;; vascular endothelial growth factor receptor signaling pathway;; vascular endothelial growth factor receptor signaling pathway	cell;; cell part	cell part;; membrane;; membrane part	binding;; catalytic activity;; molecular transducer activity	nucleoside binding;; nucleotide binding;; protein binding;; signal transducer activity;; transferase activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; localization;; locomotion;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell communication;; cell motility;; cell motion;; cellular developmental process;; cellular metabolic process;; localization of cell;; macromolecule metabolic process;; multicellular organismal development;; pattern specification process;; primary metabolic process;; regulation of biological process;; regulation of cellular process
919.1697	1070.3384	963.5013	385.9763	437.5392	407.5932	0.00014834265	1.26119	9.94006	8.67887	1349134	1451932_a_at	F2	chr3:95480329-95480688	3 F2.1	chr3:95480126-95491781	3 F2.1	RSQ	Mm.475756	NM_144899	1	1	229595		  Adamtsl4	ADAMTS-like 4 (Adamtsl4), mRNA.			apoptosis;; extracellular matrix;; extracellular matrix organization;; extracellular region;; interstitial matrix;; metalloendopeptidase activity;; peptidase activity	extracellular region;; extracellular region part	extracellular matrix;; extracellular region part	catalytic activity	hydrolase activity	cellular component organization;; cellular process;; death	cell death;; extracellular structure organization
478.4582	483.1948	490.7465	255.4788	254.9805	171.7513	0.027697751	1.11402	8.91918	7.80516	1341673	1452209_at	2	chr2:59192689-59193222	2 C1.1	chr2:58998906-59193262	2 C1.1	RSQ	Mm.260938	NM_175464	2	1	227937	RP23-311G5.1	  Pkp4	plakophilin 4 (Pkp4), transcript variant 2, mRNA.			binding;; cell adhesion;; cell junction;; protein binding	cell;; cell part	cell part;; membrane;; membrane part	binding	protein binding	biological adhesion;; cellular process	cell adhesion
313.2149	289.4501	322.5842	147.3440	132.1754	85.1842	0.025783706	1.37995	8.26724	6.88729	1349241	1452348_s_at	1	chr1:175829524-175831822	1 H3	chr1:175826485-175843053	1 H3	RSQ	Mm.476726	NM_001033450	3	3	381308		  Mnda	myeloid cell nuclear differentiation antigen (Mnda), mRNA.									
1043.0394	1148.4852	991.3447	348.7193	321.1248	262.9268	0.0009837498	1.77797	10.04845	8.27048	1349242	1452349_x_at	1			chr1:175826485-175843053	1 H3	RSQ	Mm.476726	NM_001033450	2	2	381308		  Mnda	myeloid cell nuclear differentiation antigen (Mnda), mRNA.									
390.8001	356.5885	335.1519	144.0691	213.9596	168.7820	0.014303124	1.05542	8.49236	7.43694	1341817	1452378_at	19A	chr19:5800663-5801120	19 A	chr19:5795689-5802671	19 A	RSQ		NR_002847	1	1	72289		  Malat1	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) (Malat1), non-coding RNA.									
1541.3642	1547.7487	1611.6091	452.2785	592.9019	585.0964	0.0057368039	1.53833	10.61341	9.07508	1341848	1452418_at	1			chr1:9226200-9228974	1 A2	RSQ		XM_001472850	5	3	100039464		  LOC100039464	PREDICTED: similar to gag protein, transcript variant 1 (LOC100039464), mRNA.									
1834.0718	1724.7099	1810.0079	811.2314	802.9826	720.1530	0.00034808289	1.20313	10.80492	9.60178	1341885	1452478_at	18 E1	chr18:65425204-65425576	18 E1			UGA	Mm.296528				225638		  Alpk2	Heart alpha-kinase			ATP binding;; kinase activity;; protein amino acid phosphorylation;; protein serine/threonine kinase activity;; transferase activity			binding;; catalytic activity	nucleoside binding;; nucleotide binding;; transferase activity	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
1353.7991	1394.0735	1320.7487	419.4297	461.6294	445.5274	3.5912455e-05	1.61759	10.40501	8.78742	1349296	1452519_a_at	7 10.2 cM	chr7:29161986-29162456	7 A3	chr7:29161802-29164247	7 A3	RSQ	Mm.389856	NM_011756	1	1	22695		  Zfp36	zinc finger protein 36 (Zfp36), mRNA.			AU-rich element binding;; cytoplasm;; cytosol;; cytosol;; DNA binding;; metal ion binding;; mRNA binding;; mRNA binding;; mRNA catabolic process;; negative regulation of inflammatory response;; negative regulation of myeloid cell differentiation;; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay;; nuclear-transcribed mRNA poly(A) tail shortening;; nucleic acid binding;; nucleus;; protein kinase cascade;; regulation of mRNA stability;; RNA destabilization;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding	biological regulation;; cellular process;; developmental process;; immune system process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; catabolic process;; cell communication;; cellular developmental process;; cellular metabolic process;; immune system development;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; negative regulation of response to stimulus;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of metabolic process;; regulation of multicellular organismal process;; regulation of response to stimulus;; response to external stimulus;; response to stress
1570.6307	1570.7863	1552.2630	454.0406	690.8022	420.7867	0.018281371	1.61960	10.61152	8.99192	1349404	1453238_s_at	11			chr11:86626266-86629631	11 C	RSQ		NR_002860	11	10	319269		  A130040M12Rik	RIKEN cDNA A130040M12 gene (A130040M12Rik), non-coding RNA.									
691.2556	688.4005	653.6500	243.5964	334.8340	282.7025	0.009011346	1.25125	9.40418	8.15293	1342147	1453287_at	15	chr15:31254076-31254667	15 B2	chr15:31253711-31297309	15 B2	RSQ	Mm.102470	NM_026153	1	1	67434		  Ankrd33b	ankyrin repeat domain 33B (Ankrd33b), transcript variant 1, mRNA.			DNA binding			binding	nucleic acid binding		
3904.7439	3913.8397	3797.7209	1797.2138	2240.4972	1552.8081	0.019278066	1.07150	11.91877	10.84727	1349428	1453473_a_at	17 3.1 cM			chr17:6429259-6435444	17 A1	RSQ	Mm.1948	NM_009342	14	6	21648		  Dynlt1	dynein light chain Tctex-type 1 (Dynlt1), mRNA.			axonemal dynein complex;; cytoplasmic dynein complex;; cytoplasmic dynein complex;; dynein complex;; Golgi apparatus;; microtubule;; microtubule-based process;; motor activity;; protein binding	cell;; cell part;; macromolecular complex;; organelle;; organelle part	axoneme;; axoneme part;; cell part;; cell projection;; cell projection part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part;; protein complex	binding;; catalytic activity	hydrolase activity;; protein binding	cellular process	microtubule-based process
1946.8686	1970.2910	1969.7860	884.3114	570.5846	532.9160	0.019706689	1.60416	10.93832	9.33416	1349481	1453851_a_at	13	chr13:51943246-51943781	13 A5	chr13:51942063-51943844	13 A5	RSQ	Mm.281298	NM_011817	1	1	23882		  Gadd45g	growth arrest and DNA-damage-inducible 45 gamma (Gadd45g), mRNA.		Cell cycle;; MAPK signaling pathway;; p53 signaling pathway CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Cellular Processes; Cell Growth and Death; Cell cycle [PATH:mmu04110] Cellular Processes; Cell Growth and Death; p53 signaling pathway [PATH:mmu04115]	activation of MAPKK activity;; apoptosis;; cell differentiation;; interferon-gamma biosynthetic process;; multicellular organismal development;; negative regulation of protein kinase activity;; nucleus;; protein binding;; regulation of cell cycle;; T-helper 1 cell differentiation	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	protein binding	biological regulation;; cellular process;; death;; developmental process;; immune system process;; metabolic process;; multicellular organismal process;; regulation of biological process;; response to stimulus	anatomical structure development;; biosynthetic process;; cell activation;; cell communication;; cell cycle;; cell death;; cellular developmental process;; cellular metabolic process;; cytokine production;; immune response;; immune system development;; leukocyte activation;; macromolecule metabolic process;; multicellular organismal development;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of molecular function
240.0356	270.2989	260.0346	115.6685	125.8989	100.4656	0.0015282704	1.17585	8.00269	6.82684	1349517	1454037_a_at	5 82.0 cM	chr5:148466686-148485183	5 G3	chr5:148373771-148537564	5 G3	RSQ	Mm.389712	NM_010228	1	1	14254		  Flt1	FMS-like tyrosine kinase 1 (Flt1), mRNA.		Cytokine-cytokine receptor interaction;; Endocytosis;; Focal adhesion CLASS Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060] Cellular Processes; Transport and Catabolism; Endocytosis [PATH:mmu04144] Cellular Processes; Cell Communication; Focal adhesion [PATH:mmu04510]	angiogenesis;; ATP binding;; cell differentiation;; cell migration;; identical protein binding;; integral to membrane;; kinase activity;; membrane;; multicellular organismal development;; nucleotide binding;; patterning of blood vessels;; protein amino acid phosphorylation;; protein kinase activity;; protein tyrosine kinase activity;; receptor activity;; transferase activity;; transmembrane receptor protein tyrosine kinase activity;; transmembrane receptor protein tyrosine kinase signaling pathway;; vascular endothelial growth factor receptor activity;; vascular endothelial growth factor receptor signaling pathway;; vascular endothelial growth factor receptor signaling pathway	cell;; cell part	cell part;; membrane;; membrane part	binding;; catalytic activity;; molecular transducer activity	nucleoside binding;; nucleotide binding;; protein binding;; signal transducer activity;; transferase activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; localization;; locomotion;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell communication;; cell motility;; cell motion;; cellular developmental process;; cellular metabolic process;; localization of cell;; macromolecule metabolic process;; multicellular organismal development;; pattern specification process;; primary metabolic process;; regulation of biological process;; regulation of cellular process
589.3261	566.1156	527.2449	307.0480	306.9603	223.2480	0.015274878	1.02116	9.13007	8.10891	1349753	1455826_a_at	9	chr9:45670188-45670276	9 A5.2	chr9:45646611-45670567	9 A5.2	RSQ	Mm.24044	NM_001145947	2	1	23821		  Bace1	beta-site APP cleaving enzyme 1 (Bace1), transcript variant 2, mRNA.	Generation of amyloid b-peptide by PS1	Alzheimer's disease CLASS Human Diseases; Neurodegenerative Diseases; Alzheimer's disease [PATH:mmu05010]	aspartic-type endopeptidase activity;; axon;; cytoplasmic vesicle;; endopeptidase activity;; hydrolase activity;; integral to membrane;; membrane;; membrane fraction;; peptidase activity;; proteolysis	cell;; cell part;; organelle	cell fraction;; cell part;; cell projection;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; vesicle	catalytic activity	hydrolase activity	metabolic process	catabolic process;; macromolecule metabolic process;; primary metabolic process
3532.9631	3291.2873	3378.5646	380.5947	288.2147	403.0422	0.0014827499	3.26513	11.73110	8.46597	1349775	1455899_x_at	11	chr11:117827463-117827587	11 E2	chr11:117827392-117830476	11 E2	RSQ	Mm.3468	NM_007707	1	1	12702	RP23-268N22.6	  Socs3	suppressor of cytokine signaling 3 (Socs3), mRNA.	IL-2 Receptor Beta Chain in T cell Activation;; IL22 Soluble Receptor Signaling Pathway	Adipocytokine signaling pathway;; Insulin signaling pathway;; Jak-STAT signaling pathway;; Type II diabetes mellitus CLASS Genetic Information Processing; Folding, Sorting and Degradation; Ubiquitin mediated proteolysis [PATH:mmu04120] Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910] Cellular Processes; Endocrin;; Ubiquitin mediated proteolysis	branching involved in embryonic placenta morphogenesis;; intracellular signaling cascade;; modification-dependent protein catabolic process;; negative regulation of insulin receptor signaling pathway;; negative regulation of signal transduction;; placenta blood vessel development;; positive regulation of cell differentiation;; positive regulation of cell differentiation;; protein binding;; regulation of cell differentiation;; regulation of cell differentiation;; regulation of growth;; regulation of protein amino acid phosphorylation;; spongiotrophoblast differentiation;; spongiotrophoblast differentiation;; trophoblast giant cell differentiation;; trophoblast giant cell differentiation			binding	protein binding	biological regulation;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure morphogenesis;; catabolic process;; cell communication;; cellular developmental process;; cellular metabolic process;; cellular response to stimulus;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of response to stimulus;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of growth;; regulation of metabolic process;; regulation of response to stimulus;; response to chemical stimulus;; response to endogenous stimulus
763.4848	831.3570	798.5396	355.6544	325.9099	306.1279	0.00028478051	1.27878	9.63900	8.36022	1349776	1455900_x_at	2 89.0 cM	chr2:157942148-157942327	2 H1			IPA							  Tgm2	transglutaminase 2, C polypeptide									
2547.2819	2516.3176	2565.6128	288.0805	200.8621	249.8199	0.001942104	3.38393	11.31231	7.92838	1349871	1456212_x_at	11 E2	chr11:117827490-117827770	11 E2			IPA	Mm.3468						  Socs3	Suppressor of cytokine signaling 3 (Socs3), mRNA									
208.0730	213.4019	206.8505	68.1122	71.9474	92.0111	0.0078513257	1.44946	7.71027	6.26082	1342688	1457147_at	2 A3	chr2:20724458-20725017	2 A3			UGA	Mm.237935				208618	RP23-436G18.1	  Etl4	Enhancer trap locus 4, mRNA (cDNA clone IMAGE:4988846)			cytoplasm;; embryonic skeletal system development;; multicellular organismal development	cell;; cell part	cell part;; intracellular;; intracellular part			developmental process;; multicellular organismal process	anatomical structure development;; embryonic development;; multicellular organismal development
198.4157	171.6622	146.4321	85.3619	82.4758	77.7347	0.008884976	1.06266	7.41663	6.35397	1342840	1460227_at	X 6.2 cM	chrX:20449919-20451746	X A1.3	chrX:20447291-20451863	X A1.3	RSQ	Mm.8245	NM_011593	2	1	21857	RP23-132C19.3	  Timp1	tissue inhibitor of metalloproteinase 1 (Timp1), transcript variant 2, mRNA.	Inhibition of Matrix Metalloproteinases		basement membrane;; enzyme inhibitor activity;; erythrocyte maturation;; extracellular region;; metalloendopeptidase inhibitor activity;; proteinaceous extracellular matrix	extracellular region;; extracellular region part	extracellular matrix;; extracellular matrix part;; extracellular region part	enzyme regulator activity	enzyme inhibitor activity;; metalloenzyme regulator activity	biological regulation;; cellular process;; developmental process;; immune system process;; multicellular organismal process	anatomical structure development;; cellular developmental process;; developmental maturation;; immune system development;; multicellular organismal development;; regulation of biological quality
169.3280	186.2567	185.7142	40.9233	51.9237	33.3449	0.0052350661	2.12307	7.49392	5.37085	1342983	1460417_at	6			chr6:31115507-31168433	6 A3.3	RSQ		XR_035177	2	1	232685		  AB041803	PREDICTED: cDNA sequence AB041803 (AB041803), misc RNA.									
809.1483	836.9576	830.6730	349.4893	375.8326	486.0467	0.017664352	1.04647	9.68914	8.64267	1342988	1460426_at	3 F2.2|3 51.5 cM	chr3:97550660-97557001	3 F2.2			UGA	Mm.129840				83679		  Pde4dip	Phosphodiesterase 4D interacting protein (myomegalin), mRNA (cDNA clone IMAGE:4954590)			cytoplasm;; Golgi apparatus;; nucleus;; protein binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	protein binding		
249.1946	279.8767	280.6690	83.2745	69.1519	74.9461	8.5178578e-05	1.83441	8.07417	6.23976	1343058	1460670_at	18 3.0 cM	chr18:12314622-12314869	18 A1	chr18:12287358-12315876	18 A1	RSQ	Mm.28551	NM_024182	1	1	66878		  Riok3	RIO kinase 3 (yeast) (Riok3), mRNA.			ATP binding;; catalytic activity;; kinase activity;; nucleotide binding;; protein amino acid phosphorylation;; protein binding;; protein serine/threonine kinase activity;; transferase activity			binding;; catalytic activity	nucleoside binding;; nucleotide binding;; protein binding;; transferase activity	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
440.7553	451.3074	438.1184	122.2080	189.0929	209.3232	0.027798395	1.39041	8.79233	7.40191	1370792	1420098_s_at	13	chr13:44852332-44852589	13 A5			UGA	Mm.395784						  	Transcribed locus									
157.4279	160.8017	171.8950	37.5507	31.6839	29.9369	0.00051526038	2.31092	7.35102	5.04010	1370809	1420312_s_at						IPA							  	Unknown									
721.2315	703.3000	714.5902	243.2002	335.2188	213.8707	0.016776483	1.45924	9.47776	8.01852	1350443	1428352_at	8	chr8:73359362-73359595	8 B3.3	chr8:73359036-73363619	8 B3.3	RSQ	Mm.24215	NM_027560	1	1	70807		  Arrdc2	arrestin domain containing 2 (Arrdc2), mRNA.									
149.7921	171.9226	159.7830	22.1049	22.4992	14.7266	0.0024061758	3.04465	7.32413	4.27948	1350626	1428663_at	3	chr3:131021980-131022466	3 G3	chr3:131021902-131047841	3 G3	RSQ	Mm.273360	NM_028943	1	1	74442		  Sgms2	sphingomyelin synthase 2 (Sgms2), mRNA.		Metabolic pathways CLASS Metabolism; Lipid Metabolism; Sphingolipid metabolism [PATH:mmu00600];; Sphingolipid metabolism	ceramide cholinephosphotransferase activity;; Golgi apparatus;; integral to Golgi membrane;; integral to membrane;; integral to plasma membrane;; kinase activity;; lipid metabolic process;; membrane;; plasma membrane;; sphingolipid metabolic process;; sphingomyelin biosynthetic process;; sphingomyelin synthase activity;; transferase activity	cell;; cell part;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	catalytic activity	transferase activity	cellular process;; metabolic process	biosynthetic process;; cellular metabolic process;; organophosphate metabolic process;; primary metabolic process
446.6242	435.1519	418.9619	170.0964	167.5998	173.0215	2.971282e-05	1.34836	8.75966	7.41130	1350820	1428976_at	10 49.0 cM	chr10:90623328-90623756	10 C2	chr10:90623161-90634327	10 C2	RSQ	Mm.159684	NM_011605	1	1	21917		  Tmpo	thymopoietin (Tmpo), transcript variant 1, mRNA.			chromatin;; chromosome;; DNA binding;; integral to membrane;; membrane;; nuclear envelope;; nucleus;; protein binding;; protein binding;; regulation of transcription	cell;; cell part;; envelope;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle envelope;; organelle part	binding	nucleic acid binding;; protein binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
176.0733	163.8612	185.4764	56.7982	66.7099	85.5941	0.010701632	1.34814	7.45048	6.10235	1350856	1429029_at	3 G3	chr3:131025716-131026224	3 G3			UGA	Mm.273360				74442		  Sgms2	Sphingomyelin synthase 2 (Sgms2), mRNA		Metabolic pathways CLASS Metabolism; Lipid Metabolism; Sphingolipid metabolism [PATH:mmu00600];; Sphingolipid metabolism	ceramide cholinephosphotransferase activity;; Golgi apparatus;; integral to Golgi membrane;; integral to membrane;; integral to plasma membrane;; kinase activity;; lipid metabolic process;; membrane;; plasma membrane;; sphingolipid metabolic process;; sphingomyelin biosynthetic process;; sphingomyelin synthase activity;; transferase activity	cell;; cell part;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	catalytic activity	transferase activity	cellular process;; metabolic process	biosynthetic process;; cellular metabolic process;; organophosphate metabolic process;; primary metabolic process
449.9078	429.0964	416.2630	218.1116	210.2545	200.4126	2.8193052e-05	1.04275	8.75333	7.71058	1350997	1429236_at	14 B	chr14:32872910-32873143	14 B			UGA	Mm.40681				78754		  Galntl2	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2, mRNA (cDNA clone MGC:161357 IMAGE:40143107)		Metabolic pathways CLASS Metabolism; Glycan Biosynthesis and Metabolism; O-Glycan biosynthesis [PATH:mmu00512];; O-Glycan biosynthesis	calcium ion binding;; Golgi apparatus;; integral to membrane;; manganese ion binding;; membrane;; polypeptide N-acetylgalactosaminyltransferase activity;; sugar binding;; transferase activity;; transferase activity, transferring glycosyl groups	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle	binding;; catalytic activity	carbohydrate binding;; ion binding;; transferase activity		
2651.2744	2589.4455	2539.6318	1115.3331	1108.1391	1272.8304	0.00177508	1.15676	11.34043	10.18367	1351041	1429300_at	12	chr12:112214932-112215222	12 F1	chr12:112213562-112217231	12 F1	RSQ	Mm.250989	NM_175207	1	1	74251		  Ankrd9	ankyrin repeat domain 9 (Ankrd9), mRNA.			hydrolase activity			catalytic activity	hydrolase activity		
490.1945	545.4885	531.4098	189.8447	211.8299	242.2117	0.0019181976	1.28891	9.02743	7.73852	1351042	1429304_at	8 A1.1	chr8:11614351-11614743	8 A1.1			UGA	Mm.12459				102334		  Ankrd10	Ankyrin repeat domain 10 (Ankrd10), mRNA									
770.8939	816.5641	783.4769	331.2824	460.8672	368.0517	0.01534984	1.04456	9.62585	8.58130	1351133	1429433_at	1	chr1:164650697-164670489	1 H2.1	chr1:164601915-164670687	1 H2.1	RSQ	Mm.245446	NM_001081290	1	1	226562		  Bat2d	BAT2 domain containing 1 (Bat2d), mRNA.									
1520.5557	1413.4250	1449.4810	629.6930	736.0449	707.3292	0.00099945353	1.08276	10.51223	9.42946	1351240	1429593_at	15	chr15:96528309-96529220	15 F1	chr15:96517822-96530129	15 F1	RSQ	Mm.46754	NM_175121	1	1	67760		  Slc38a2	solute carrier family 38, member 2 (Slc38a2), mRNA.			amino acid transmembrane transporter activity;; amino acid transport;; integral to membrane;; ion transport;; membrane;; plasma membrane;; sodium ion binding;; sodium ion transport;; symporter activity;; transport	cell;; cell part	cell part;; membrane;; membrane part	binding;; transporter activity	ion binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization	establishment of localization;; transmembrane transport;; transport
213.7861	194.7983	208.1551	89.1978	118.5466	92.5447	0.0095894959	1.04902	7.68246	6.63344	1351285	1429653_at	8	chr8:123102647-123103192	8 E1	chr8:123059756-123105283	8 E1	RSQ	Mm.334856	NM_001145897	3	1	382034		  Gse1	genetic suppressor element 1 (Gse1), transcript variant 3, mRNA.									
350.0629	369.2184	348.2867	147.6102	135.4853	103.3945	0.0091245899	1.48143	8.47464	6.99322	1351449	1429870_at	3 A3	chr3:28259219-28259607	3 A3			UG5	Mm.126193				665113		  Tnik	TRAF2 and NCK interacting kinase, mRNA (cDNA clone MGC:183916 IMAGE:9087916)			ATP binding;; kinase activity;; nucleotide binding;; protein amino acid phosphorylation;; protein kinase activity;; protein serine/threonine kinase activity;; small GTPase regulator activity;; transferase activity			binding;; catalytic activity;; enzyme regulator activity	nucleoside binding;; nucleoside-triphosphatase regulator activity;; nucleotide binding;; transferase activity	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
1515.4177	1480.7350	1444.3174	491.5905	604.3024	492.1917	0.0032792488	1.49008	10.53126	9.04117	1351474	1429900_at	6	chr6:31058893-31059397	6 A3.3			UGA	Mm.109877						  	Transcribed locus									
155.1161	135.5725	143.1183	51.7500	69.4427	65.1060	0.0044366395	1.22841	7.17373	5.94532	1351702	1430183_at	1	chr1:170349828-170350347	1 H2.3			UGA	Mm.441506						  	Transcribed locus									
163.3294	172.5743	179.3186	58.2947	53.2984	30.0474	0.021963542	1.91954	7.42303	5.50349	1351838	1430352_at	6 D1	chr6:92795416-92795850	6 D1			UGA	Mm.257557				101401	mCG_142056	  Adamts9	MKIAA1312 protein			endopeptidase activity;; extracellular space;; metallopeptidase activity;; positive regulation of melanocyte differentiation;; proteinaceous extracellular matrix;; proteolysis;; proteolysis;; regulation of pigmentation during development	extracellular region;; extracellular region part	extracellular matrix;; extracellular region part;; extracellular space	catalytic activity	hydrolase activity	biological regulation;; cellular process;; developmental process;; metabolic process;; pigmentation;; positive regulation of biological process;; regulation of biological process	catabolic process;; cellular developmental process;; macromolecule metabolic process;; pigmentation during development;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process
146.5877	150.8532	147.7075	39.4089	51.0285	47.2845	0.0038343952	1.70075	7.21307	5.51233	1351845	1430362_at		chr19:40547310-40547726	19 C3			IPA							  5730409N24Rik	RIKEN cDNA 5730409N24 gene									
37.6487	47.3004	35.4280	16.2362	19.5770	21.6505	0.0037629812	1.06552	5.31504	4.24952	1351852	1430370_at	1 H4-H6	chr1:187233494-187233858	1 H5			UGA	Mm.154511				107508		  Eprs	Glutamyl-prolyl-tRNA synthetase, mRNA (cDNA clone IMAGE:3482737)		Aminoacyl-tRNA biosynthesis;; Metabolic pathways CLASS Metabolism; Metabolism of Cofactors and Vitamins; Porphyrin and chlorophyll metabolism [PATH:mmu00860] Genetic Information Processing; Translation; Aminoacyl-tRNA biosynthesis [PATH:mmu00970];; Porphyrin and chlorophyll metabolism	aminoacyl-tRNA ligase activity;; ATP binding;; catalytic activity;; cytoplasm;; glutamate-tRNA ligase activity;; glutamyl-tRNA aminoacylation;; ligase activity;; nucleotide binding;; proline-tRNA ligase activity;; prolyl-tRNA aminoacylation;; RNA binding;; translation;; tRNA aminoacylation for protein translation	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; catalytic activity	ligase activity;; nucleic acid binding;; nucleoside binding;; nucleotide binding	cellular process;; metabolic process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process
115.4007	100.5551	96.9803	49.7839	51.6039	45.2680	0.00051389157	1.09151	6.70066	5.60915	1352062	1430646_at	14	chr14:120800227-120800737	14 E4			IPA							  5830407P18Rik	RIKEN cDNA 5830407P18 gene									
383.6388	365.6560	313.3908	95.4936	103.2550	91.5338	0.00023444939	1.86871	8.46326	6.59454	1352101	1430702_at	15	chr15:98590670-98590993	15 F1	chr15:98590568-98592483	15 F1	RSQ	Mm.441883	NM_175232	1	1	76061		  5830427D03Rik	RIKEN cDNA 5830427D03 gene (5830427D03Rik), mRNA.									
9433.1238	9259.4961	9238.1963	3934.7630	4022.8224	4599.7075	0.0032049	1.15675	13.18454	12.02779	1352351	1431043_at	9 F4	chr9:121689700-121692543	9 F4			UG5	Mm.45734				72330		  Kbtbd5	Kelch repeat and BTB (POZ) domain containing 5, mRNA (cDNA clone MGC:169513 IMAGE:8860908)			protein binding			binding	protein binding		
81.3256	82.4758	80.4278	29.3253	36.5566	41.7785	0.014765997	1.19678	6.34705	5.15027	1353415	1432665_at		chr13:110437515-110438024	13 D2.2			IPA							  2210416J07Rik	RIKEN cDNA 2210416J07 gene									
366.4738	387.5431	410.2278	148.2475	159.4852	198.2542	0.0053616448	1.21190	8.59869	7.38678	1353535	1432787_at	5	chr5:15476262-15476595	5 A2			UGA	Mm.446079						  	Transcribed locus									
263.0060	299.3766	284.2593	100.4218	128.4346	98.1071	0.002965989	1.38158	8.13861	6.75703	1353584	1432850_at	15	chr15:36181152-36181511	15 B3.1			UGA	Mm.440854						  	Transcribed locus									
1834.2010	1780.4161	1640.9575	189.6256	260.8673	176.7876	0.0017335498	3.08640	10.77309	7.68669	1353873	1433148_at		chr7:137797332-137797814	7 F3			IPA							  4930513N20Rik	RIKEN cDNA 4930513N20 gene									
117.0374	95.5320	101.9767	37.9231	56.9618	65.5576	0.038833124	1.00307	6.70694	5.70387	1353929	1433207_at						IPA							  5033430J17Rik	RIKEN cDNA 5033430J17 gene									
2908.2019	2883.9926	3032.4237	885.3391	1122.8809	694.1395	0.0122713	1.73462	11.52201	9.78739	1354215	1433634_at	8	chr8:129114739-129115115	8 E2	chr8:129112193-129117336	8 E2	RSQ	Mm.334918	XM_284454	2	1	270110		  Irf2bp2	PREDICTED: interferon regulatory factor 2 binding protein 2, transcript variant 1 (Irf2bp2), mRNA.			negative regulation of transcription from RNA polymerase II promoter;; nucleus;; protein binding;; transcription corepressor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	protein binding;; transcription cofactor activity;; transcription repressor activity	biological regulation;; cellular process;; metabolic process;; negative regulation of biological process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
222.2389	264.1762	259.0106	125.0574	94.8466	100.3231	0.0020691697	1.22524	7.95273	6.72749	1354351	1433898_at	14	chr14:76160237-76160494	14 D3			UGA	Mm.396080						  	Transcribed locus									
709.6888	752.1101	749.1160	276.9297	255.5127	261.6229	7.8144053e-06	1.47764	9.52496	8.04732	1354463	1434106_at	9	chr9:111179458-111179967	9 F3	chr9:111174348-111181597	9 F3	RSQ	Mm.209005	NM_175266	1	1	77781		  Epm2aip1	EPM2A (laforin) interacting protein 1 (Epm2aip1), mRNA.			endoplasmic reticulum	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle				
895.9289	968.5798	964.6927	395.7955	398.8186	367.5773	1.6576166e-05	1.28360	9.88030	8.59670	1354476	1434140_at	8 A2	chr8:13020121-13020475	8 A1.1			UG5	Mm.334413				17207		  Mcf2l	Guanine nucleotide exchange factor OSTIII mRNA, complete cds, alternatively spliced			cytoplasm;; guanyl-nucleotide exchange factor activity;; intracellular;; intracellular signaling cascade;; lamellipodium;; membrane;; phosphatidylinositol binding;; plasma membrane;; protein binding;; regulation of Rho protein signal transduction;; Rho guanyl-nucleotide exchange factor activity;; Rho protein signal transduction	cell;; cell part	cell leading edge;; cell part;; cell projection;; intracellular;; intracellular part;; membrane	binding;; enzyme regulator activity	lipid binding;; nucleoside-triphosphatase regulator activity;; protein binding	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
700.8431	719.2352	784.4297	75.8925	102.0345	93.8107	0.00050422278	3.02943	9.51959	6.49016	1371171	1434202_a_at	14 A1	chr14:9128859-9128932	14 A1			UGA	Mm.256058				268709		  Fam107a	Family with sequence similarity 107, member A (Fam107a), mRNA									
377.5711	361.0213	337.8389	83.9730	105.8040	97.9957	0.0005297996	1.90833	8.48558	6.57725	1354513	1434203_at	14	chr14:9128829-9129307	14 A1	chr14:9128791-9142290	14 A1	RSQ	Mm.256058	NM_183187	1	1	268709		  Fam107a	family with sequence similarity 107, member A (Fam107a), mRNA.									
477.1519	439.0444	383.4660	192.9852	228.1720	227.8985	0.0013016765	1.00030	8.75316	7.75286	1354583	1434350_at	9	chr9:119880327-119880851	9 F4	chr9:119880283-119893776	9 F4	RSQ	Mm.477982	NM_153287	1	1	215418		  Csrnp1	cysteine-serine-rich nuclear protein 1 (Csrnp1), mRNA.			apoptosis;; DNA binding;; face morphogenesis;; nucleus;; palate development;; platelet-derived growth factor receptor signaling pathway;; positive regulation of transcription from RNA polymerase II promoter;; post-embryonic development;; regulation of transcription, DNA-dependent;; skeletal system morphogenesis;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; transcription factor activity	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell communication;; cell death;; cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; post-embryonic development;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
207.4297	208.1106	207.4490	100.4872	83.4510	72.2200	0.011138922	1.29541	7.69810	6.40268	1354998	1435125_at	12	chr12:104432850-104433264	12 E			UG5	Mm.427936						  	Transcribed locus									
159.3496	156.2344	176.4121	84.6464	71.9656	68.1550	0.0013933987	1.13435	7.35548	6.22112	1355059	1435229_at	9 B	chr9:40100858-40101373	9 A5.1			UGA	Mm.138434				235283		  Gramd1b	GRAM domain containing 1B, mRNA (cDNA clone MGC:99432 IMAGE:30616509)			integral to membrane;; membrane	cell;; cell part	cell part;; membrane;; membrane part				
372.2521	352.9941	376.7788	191.8741	166.4852	168.4244	0.0010463113	1.06733	8.52040	7.45307	1355200	1435459_at	1	chr1:164804683-164805007	1 H2.1			UGA	Mm.458151						  	Transcribed locus									
150.3186	157.9297	173.0408	16.3376	17.4830	15.7107	3.379342e-06	3.27943	7.32333	4.04389	1355275	1435579_at	4					UG5	Mm.427140						  	Transcribed locus									
122.4483	102.1966	116.8127	55.8059	49.3603	55.0942	0.00058009394	1.08928	6.82643	5.73715	1355354	1435694_at	18	chr18:39535346-39535896	18 B3	chr18:39152798-39535939	18 B3	RSQ	Mm.329396	NM_175164	1	1	71302		  Arhgap26	Rho GTPase activating protein 26 (Arhgap26), mRNA.			cell junction;; cytoplasm;; cytoskeleton;; GTPase activator activity;; intracellular;; signal transduction	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; non-membrane-bounded organelle	enzyme regulator activity	enzyme activator activity;; nucleoside-triphosphatase regulator activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
61.6073	49.9463	46.7772	16.9342	18.8200	21.6851	0.000847205	1.46012	5.71169	4.25157	1355485	1435918_at	14 A1	chr14:9130098-9130562	14 A1			UG5	Mm.256058				268709		  Fam107a	Family with sequence similarity 107, member A (Fam107a), mRNA									
190.8741	164.4699	176.2763	56.0655	53.6770	63.5241	8.5159425e-05	1.61845	7.46662	5.84817	1355677	1436200_at	X A2	chrX:33906277-33906788	X A3.3			UGA	Mm.327654				74365	RP23-145O4.1	  Lonrf3	LON peptidase N-terminal domain and ring finger 3, mRNA (cDNA clone MGC:155927 IMAGE:40129613)			ATP-dependent peptidase activity;; binding;; metal ion binding;; protein binding;; proteolysis;; zinc ion binding			binding;; catalytic activity	hydrolase activity;; ion binding;; protein binding	metabolic process	catabolic process;; macromolecule metabolic process;; primary metabolic process
799.1938	780.8251	746.5896	333.4076	321.1290	341.3507	6.6830051e-06	1.22406	9.59848	8.37442	1355678	1436202_at	19A	chr19:5795727-5796151	19 A	chr19:5795689-5802671	19 A	RSQ		NR_002847	1	1	72289		  Malat1	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) (Malat1), non-coding RNA.									
883.2305	907.7333	907.8808	389.6821	464.1718	405.9100	0.0038448663	1.10315	9.81304	8.70990	1355793	1436387_at	13	chr13:94129930-94130365	13 C3			UGA	Mm.443111						  	Transcribed locus									
153.1169	163.4870	160.2423	65.6854	53.3364	51.2932	0.0035887306	1.49346	7.31188	5.81841	1356093	1436913_at	3	chr3:115975515-115976043	3 G1	chr3:115975470-116126950	3 G1	RSQ	Mm.17647	NM_001080818	1	1	229776		  Cdc14a	CDC14 cell division cycle 14 homolog A (S. cerevisiae) (Cdc14a), mRNA.		Cell cycle CLASS Cellular Processes; Cell Growth and Death; Cell cycle [PATH:mmu04110]	cell cycle;; cell division;; dephosphorylation;; hydrolase activity;; nucleus;; phosphatase activity;; phosphoprotein phosphatase activity;; protein amino acid dephosphorylation;; protein tyrosine phosphatase activity;; protein tyrosine/serine/threonine phosphatase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	catalytic activity	hydrolase activity	cellular process;; metabolic process	cell cycle;; cell division;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
926.8725	1032.5292	943.0098	432.0746	493.8186	454.5984	0.00015223645	1.07263	9.91644	8.84381	1356153	1437065_at	16 B4|16 28.9 cM	chr16:43637509-43638069	16 B4			UGA	Mm.136238				56490	RP23-283M18.1	  Zbtb20	Zinc finger and BTB domain containing 20, mRNA (cDNA clone IMAGE:6484816)			DNA binding;; intracellular;; metal ion binding;; nucleic acid binding;; nucleus;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding;; protein binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
471.4836	454.9973	431.8068	200.8808	177.3062	180.2973	0.00013052401	1.28350	8.82167	7.53818	1371306	1437073_x_at	14	chr14:76159946-76160160	14 D3			UGA	Mm.396080						  	Transcribed locus									
338.4798	390.2439	380.8212	110.4357	104.9347	136.2076	0.00088642324	1.66468	8.52804	6.86336	1356231	1437199_at	19 D2	chr19:53615956-53616474	19 D2			UGA	Mm.52043				240672		  Dusp5	Dual specificity phosphatase 5 (Dusp5), mRNA		MAPK signaling pathway CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010]	hydrolase activity;; MAP kinase tyrosine/serine/threonine phosphatase activity			catalytic activity	hydrolase activity		
231.0754	242.5964	270.8637	95.4002	95.9302	114.5361	0.00041733377	1.28552	7.95202	6.66650	1356243	1437219_at	7	chr7:75169335-75169849	7 D1			UGA	Mm.436787						  	Transcribed locus									
456.9299	401.8184	460.9338	193.3496	197.5964	170.2855	0.00018573031	1.23378	8.77821	7.54443	1356245	1437224_at	11	chr11:29606699-29607240	11 A3.3	chr11:29593773-29642916	11 A3.3	RSQ	Mm.192580	NM_194051	2	1	68585	RP23-176O5.4	  Rtn4	reticulon 4 (Rtn4), transcript variant 5, mRNA.			angiogenesis;; cell projection;; cell soma;; endoplasmic reticulum;; integral to endoplasmic reticulum membrane;; integral to membrane;; membrane;; negative regulation of anti-apoptosis;; negative regulation of axon extension;; nervous system development;; nuclear envelope;; regulation of cell migration	cell;; cell part;; envelope;; organelle;; organelle part	cell part;; cell projection;; cell soma;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle envelope;; organelle membrane;; organelle part			anatomical structure formation;; biological regulation;; cellular component organization;; cellular process;; death;; developmental process;; localization;; locomotion;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell death;; cell motility;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; localization of cell;; multicellular organismal development;; negative regulation of anti-apoptosis;; negative regulation of biological process;; negative regulation of cellular component organization;; negative regulation of cellular process;; negative regulation of developmental process;; regulation of anti-apoptosis;; regulation of biological process;; regulation of cellular component organization;; regulation of cellular process;; regulation of developmental process;; regulation of localization;; regulation of locomotion;; regulation of multicellular organismal process
241.9925	280.4297	252.9257	92.3813	79.5893	110.4748	0.0029925385	1.46709	8.01096	6.54387	1356345	1437410_at	5 F-G1	chr5:122021168-122021702	5 F			UGA	Mm.284446				11669		  Aldh2	Aldehyde dehydrogenase 2, mitochondrial, mRNA (cDNA clone MGC:6764 IMAGE:3600875)		3-Chloroacrylic acid degradation;; Arginine and proline metabolism;; Ascorbate and aldarate metabolism;; beta-Alanine metabolism;; Butanoate metabolism;; Fatty acid metabolism;; Glycerolipid metabolism;; Glycolysis / Gluconeogenesis;; Histidine metabolism;; Limonene and pinene degradation;; Lysine degradation;; Metabolic pathways CLASS Metabolism; Carbohydrate Metabolism; Glycolysis / Gluconeogenesis [PATH:mmu00010] Metabolism; Carbohydrate Metabolism; Ascorbate and aldarate metabolism [PATH:mmu00053] Metabolism; Carbohydrate Metabolism; Pyruvate metabolism [PATH:mmu00620] Metabolism; Carbohydrate Metabolism; Propanoate metabolism [PATH:mmu00640] Metabolism; C;; Propanoate metabolism;; Pyruvate metabolism;; Tryptophan metabolism;; Valine, leucine and isoleucine degradation	aldehyde dehydrogenase (NAD) activity;; metabolic process;; mitochondrion;; oxidation reduction;; oxidoreductase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	catalytic activity	oxidoreductase activity	metabolic process	oxidation reduction
248.5012	240.5821	210.3925	78.8521	58.7368	90.1229	0.0058168562	1.63778	7.86148	6.22370	1356390	1437493_at	2	chr2:52728790-52729240	2 C1.1			UG5	Mm.274277						  	Transcribed locus									
146.8320	146.7885	157.9181	46.0129	36.5453	47.5652	0.002412252	1.80375	7.23288	5.42914	1356438	1437584_at	17	chr17:47656286-47656414	17 C			UGA	Mm.453308						  	Transcribed locus									
178.3563	174.5084	177.8324	68.6307	86.1956	82.4230	0.0069038462	1.16828	7.46672	6.29843	1356463	1437638_at	17	chr17:23950981-23951487	17 A3.3			UGA	Mm.436876						  	Transcribed locus, strongly similar to NP_780438.2 serine/arginine repetitive matrix 2 [Mus musculus]									
108.4330	121.6541	108.5970	44.1927	41.3511	42.8751	0.00020678594	1.39750	6.81671	5.41922	1356486	1437676_at	11 C	chr11:93911380-93911961	11 D			UG5	Mm.260737				70834	RP23-378I13.3	  Spag9	JNK-associated leucine-zipper protein			activation of MAPK activity;; cytoplasm;; JUN kinase binding;; kinesin binding;; protein homooligomerization	cell;; cell part	cell part;; intracellular;; intracellular part	binding	protein binding	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; metabolic process;; regulation of biological process	cell communication;; cellular component assembly;; cellular metabolic process;; macromolecular complex subunit organization;; macromolecule metabolic process;; primary metabolic process;; protein complex biogenesis;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of molecular function
262.5829	273.7075	312.6099	135.7866	130.2255	137.5409	0.0026197013	1.06919	8.14045	7.07126	1356494	1437700_at	3 E2	chr3:68401496-68402039	3 E1			UG5	Mm.331064				30953		  Schip1	Schwannomin interacting protein 1 (Schip1), transcript variant 4, mRNA			cytoplasm;; face morphogenesis;; fibroblast migration;; kidney development;; nitrogen compound metabolic process;; palate development;; platelet-derived growth factor receptor signaling pathway;; post-embryonic development;; protein binding;; protein homodimerization activity;; skeletal system morphogenesis;; smooth muscle tissue development	cell;; cell part	cell part;; intracellular;; intracellular part	binding	protein binding	biological regulation;; cellular process;; developmental process;; localization;; locomotion;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; cell communication;; cell motility;; cell motion;; localization of cell;; multicellular organismal development;; nitrogen compound metabolic process;; post-embryonic development;; regulation of biological process;; regulation of cellular process
684.1270	783.3072	721.2501	310.2089	313.9490	367.9784	0.00052102611	1.14365	9.50864	8.36499	1356511	1437745_at	4 1.0 cM	chr4:8679995-8712728	4 A1	chr4:8618067-8793957	4 A1	RSQ	Mm.138792	NM_001081417	1	1	320790	RP23-464N23.1	  Chd7	chromodomain helicase DNA binding protein 7 (Chd7), mRNA.			adult heart development;; adult walking behavior;; ATP binding;; ATP-dependent helicase activity;; blood circulation;; blood vessel development;; camera-type eye development;; chromatin;; chromatin assembly or disassembly;; chromatin binding;; chromatin modification;; DNA binding;; ear morphogenesis;; embryonic hindlimb morphogenesis;; female genitalia development;; heart morphogenesis;; helicase activity;; hydrolase activity;; in utero embryonic development;; inner ear morphogenesis;; locomotory behavior;; nose development;; nucleic acid binding;; nucleotide binding;; nucleus;; palate development;; positive regulation of multicellular organism growth;; regulation of transcription, DNA-dependent;; sensory perception of sound;; transcription	cell;; cell part;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part	binding;; catalytic activity	chromatin binding;; hydrolase activity;; nucleic acid binding;; nucleoside binding;; nucleotide binding	biological regulation;; cellular component organization;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; response to stimulus	adult behavior;; anatomical structure development;; anatomical structure morphogenesis;; behavior;; biosynthetic process;; cellular metabolic process;; embryonic development;; macromolecule metabolic process;; multicellular organism growth;; multicellular organismal development;; nitrogen compound metabolic process;; organelle organization;; positive regulation of biological process;; positive regulation of growth;; positive regulation of multicellular organismal process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of growth;; regulation of metabolic process;; regulation of multicellular organismal process;; reproductive developmental process;; reproductive process;; system process
302.5165	271.0408	277.1673	96.9872	129.5435	115.0347	0.0035536382	1.32497	8.14595	6.82098	1356556	1437821_at		chr18:38032193-38032756	18 B3			IPA							  	Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430005H19 product:unknown EST, full insert sequence.									
82.1644	66.3981	73.2373	29.0849	21.7617	20.6855	0.0020038048	1.64385	6.20267	4.55882	1356563	1437833_at	19 B|19 2.0 cM	chr19:5752075-5752356	19 A			UG5	Mm.182396				16998		  Ltbp3	Latent transforming growth factor beta binding protein 3 (Ltbp3), mRNA			binding;; calcium ion binding;; extracellular region;; growth factor binding;; proteinaceous extracellular matrix;; skeletal system development;; transforming growth factor beta receptor signaling pathway;; transforming growth factor beta receptor signaling pathway	extracellular region;; extracellular region part	extracellular matrix;; extracellular region part	binding	ion binding;; protein binding	biological regulation;; cellular process;; developmental process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; cell communication;; multicellular organismal development;; regulation of biological process;; regulation of cellular process
835.8576	789.2137	720.4744	122.8249	143.6006	174.2888	0.0010525991	2.42416	9.60806	7.18390	1356604	1437916_at	7	chr7:71051764-71051840	7 C			UGA	Mm.446212						  	Transcribed locus									
369.8274	350.1241	354.2457	126.2876	210.4329	154.0408	0.031056468	1.16203	8.48368	7.32165	1356607	1437923_at	18	chr18:61745836-61746386	18 E1			UGA	Mm.437042						  	Transcribed locus									
1713.8843	1705.9656	1711.3184	569.3217	724.9167	772.0500	0.010061013	1.32433	10.74011	9.41577	1356671	1438039_at	12 17.0 cM	chr12:52899719-52903413	12 C1	chr12:52844708-52930523	12 C1	RSQ	Mm.249391	NM_144788	1	1	207304		  Hectd1	HECT domain containing 1 (Hectd1), mRNA.			ligase activity;; modification-dependent protein catabolic process;; neural tube closure			catalytic activity	ligase activity	anatomical structure formation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; catabolic process;; cellular metabolic process;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; primary metabolic process
1462.5408	1454.6406	1494.3118	660.0924	683.9703	631.4610	0.00023469249	1.15970	10.52199	9.36229	1371369	1438157_s_at	12	chr12:56590865-56590958	12 C1	chr12:56590395-56593634	12 C1	RSQ	Mm.170515	NM_010907	1	1	18035		  Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (Nfkbia), mRNA.	Acetylation and Deacetylation of RelA in The Nucleus;; Activation of PKC through G protein coupled receptor;; AKT Signaling Pathway;; ATM Signaling Pathway;; Cadmium induces DNA synthesis and proliferation in macrophages;; CD40L Signaling Pathway;; Double Stranded RNA Induced Gene Expression;; Erythropoietin mediated neuroprotection through NF-kB;; fMLP induced chemokine gene expression in HMC-1 cells;; HIV-I Nef: negative effector of Fas and TNF;; Induction of apoptosis through DR3 and DR4/5 Death Receptors;; Influence of Ras and Rho proteins on G1 to S Transition;; Keratinocyte Differentiation;; MAPKinase Signaling Pathway;; Neuropeptides VIP and PACAP inhibit the apoptosis of activated T cells;; NF-kB Signaling Pathway;; NFkB activation by Nontypeable Hemophilus influenzae;; Signal transduction through IL1R;; T Cell Receptor Signaling Pathway;; The 4-1BB-dependent immune response;; TNF/Stress Related Signaling;; TNFR2 Signaling Pathway;; Toll-Like Receptor Pathway	Adipocytokine signaling pathway;; Apoptosis;; B cell receptor signaling pathway;; Chemokine signaling pathway;; Chronic myeloid leukemia;; Neurotrophin signaling pathway;; Pathways in cancer;; Prostate cancer;; Small cell lung cancer CLASS Cellular Processes; Cell Growth and Death; Apoptosis [PATH:mmu04210] Cellular Processes; Endocrine System; Adipocytokine signaling pathway [PATH:mmu04920] Cellular Processes; Immune System; Toll-like receptor signaling pathway [PATH:mmu04620] Cellular Processes; Immune System; T cell receptor signaling pathway [PATH:mmu04660;; T cell receptor signaling pathway;; Toll-like receptor signaling pathway	cytoplasm;; cytosol;; lipopolysaccharide-mediated signaling pathway;; negative regulation of myeloid cell differentiation;; negative regulation of NF-kappaB transcription factor activity;; negative regulation of Notch signaling pathway;; NF-kappaB binding;; nucleotide-binding oligomerization domain containing 1 signaling pathway;; nucleotide-binding oligomerization domain containing 2 signaling pathway;; nucleus;; protein import into nucleus, translocation;; regulation of cell proliferation;; response to exogenous dsRNA;; response to lipopolysaccharide;; response to muramyl dipeptide;; toll-like receptor 4 signaling pathway	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	protein binding	biological regulation;; cellular process;; developmental process;; establishment of localization;; immune system process;; localization;; metabolic process;; multi-organism process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	activation of immune response;; anatomical structure development;; biosynthetic process;; cell communication;; cell proliferation;; cellular developmental process;; cellular localization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; establishment of protein localization;; immune response;; immune system development;; macromolecule localization;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of developmental process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of immune system process;; positive regulation of response to stimulus;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of metabolic process;; regulation of molecular function;; regulation of multicellular organismal process;; regulation of response to stimulus;; regulation of transcription regulator activity;; response to biotic stimulus;; response to chemical stimulus;; response to other organism;; response to stress;; transport
510.2973	504.4462	496.2075	153.8367	260.8984	266.0473	0.043708266	1.19347	8.97618	7.78271	1356796	1438268_at	2	chr2:37230581-37232466	2 B	chr2:37225588-37278423	2 B	RSQ	Mm.288785	NM_001100591	1	1	319817	RP23-321B3.1	  Rc3h2	ring finger and CCCH-type zinc finger domains 2 (Rc3h2), mRNA.			cytoplasm;; DNA binding;; membrane;; metal ion binding;; nucleic acid binding;; protein binding;; zinc ion binding	cell;; cell part	cell part;; intracellular;; intracellular part;; membrane	binding	ion binding;; nucleic acid binding;; protein binding		
100.4560	103.6976	100.7457	47.6367	36.7214	56.6343	0.024055487	1.13503	6.66708	5.53205	1356817	1438301_at	15	chr15:64021278-64021774	15 D1			UGA	Mm.448964						  	Transcribed locus									
184.2528	204.5817	197.6398	65.8815	75.6278	99.6244	0.01340227	1.30258	7.60960	6.30702	1356853	1438352_at	18	chr18:23965390-23965882	18 A2			UG5	Mm.475809						  	Transcribed locus									
885.8741	970.5680	947.4409	302.6816	274.2473	253.1274	0.00022355676	1.75894	9.86718	8.10824	1356892	1438429_at	8	chr8:11622380-11622942	8 A1.1			UGA	Mm.441154						  	Transcribed locus									
88.5275	76.0028	82.3322	36.9443	33.9261	46.2234	0.0060298184	1.08575	6.35981	5.27405	1356918	1438470_at	10 C2|10 52.0 cM	chr10:94850448-94851019	10 C2			UGA	Mm.440128				216233		  Socs2	Suppressor of cytokine signaling 2, mRNA (cDNA clone IMAGE:1068260)		Insulin signaling pathway;; Jak-STAT signaling pathway;; Type II diabetes mellitus CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Cellular Processes; Endocrine System; Insulin signaling pathway [PATH:mmu04910] Human Diseases; Metabolic Disorders; Type II diabetes mellitus [PATH:mmu04930]	growth hormone receptor binding;; intracellular signaling cascade;; lactation;; lactation;; mammary gland alveolus development;; mammary gland alveolus development;; modification-dependent protein catabolic process;; negative regulation of JAK-STAT cascade;; negative regulation of multicellular organism growth;; negative regulation of multicellular organism growth;; negative regulation of signal transduction;; positive regulation of neuron differentiation;; regulation of growth;; regulation of multicellular organism growth			binding	protein binding	biological regulation;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; catabolic process;; cell communication;; cellular developmental process;; cellular metabolic process;; macromolecule metabolic process;; multicellular organism growth;; multicellular organism reproduction;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of growth;; negative regulation of multicellular organismal process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of growth;; regulation of multicellular organismal process;; reproductive process;; reproductive process in a multicellular organism
54.4976	58.0697	61.0425	25.0141	30.9379	29.8878	0.002609536	1.02071	5.85319	4.83249	1356987	1438590_at	15 F1	chr15:97577164-97577499	15 F1			UGA	Mm.24028				223864		  Rapgef3	Rap guanine nucleotide exchange factor (GEF) 3 (Rapgef3), mRNA	Phospholipase C-epsilon pathway	Leukocyte transendothelial migration;; Long-term potentiation CLASS Cellular Processes; Immune System; Leukocyte transendothelial migration [PATH:mmu04670] Cellular Processes; Nervous System; Long-term potentiation [PATH:mmu04720]	cAMP binding;; cAMP-dependent protein kinase complex;; cAMP-dependent protein kinase regulator activity;; cytoplasm;; guanyl-nucleotide exchange factor activity;; intracellular;; intracellular signaling cascade;; membrane;; nucleotide binding;; regulation of protein amino acid phosphorylation;; regulation of small GTPase mediated signal transduction;; small GTPase mediated signal transduction	cell;; cell part;; macromolecular complex	cell part;; intracellular;; intracellular part;; membrane;; protein complex	binding;; enzyme regulator activity	kinase regulator activity;; nucleoside binding;; nucleoside-triphosphatase regulator activity;; nucleotide binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	cell communication;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
10167.4947	9930.5401	10434.9852	5070.0366	5987.5022	4184.7868	0.019275634	1.01734	13.31282	12.29549	1357030	1438704_at	4	chr4:133885037-133885355	4 D3	chr4:133871034-133885544	4 D3	RSQ	Mm.331961	NM_001039048	1	1	433766		  Trim63	tripartite motif-containing 63 (Trim63), mRNA.			contractile fiber;; cytoplasm;; intracellular;; ligase activity;; metal ion binding;; modification-dependent protein catabolic process;; muscle contraction;; nucleus;; proteasomal ubiquitin-dependent protein catabolic process;; protein binding;; protein binding;; ubiquitin-protein ligase activity;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ion binding;; ligase activity;; protein binding	cellular process;; metabolic process;; multicellular organismal process	catabolic process;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process;; system process
1134.0408	1137.9143	1071.2015	190.5138	496.9837	337.1603	0.045176646	1.81212	10.12148	8.30937	1357088	1438796_at	4 B2	chr4:48098745-48099192	4 B1			UGA	Mm.247261				18124	RP23-122N18.2	  Nr4a3	Nuclear receptor subfamily 4, group A, member 3 (Nr4a3), mRNA			adult behavior;; DNA binding;; inner ear morphogenesis;; ligand-dependent nuclear receptor activity;; mesoderm formation;; metal ion binding;; neuromuscular process controlling balance;; nucleus;; positive regulation of transcription from RNA polymerase II promoter;; positive regulation of transcription from RNA polymerase II promoter;; receptor activity;; regulation of transcription, DNA-dependent;; semicircular canal morphogenesis;; sequence-specific DNA binding;; steroid hormone receptor activity;; transcription;; transcription activator activity;; transcription factor activity;; vestibular reflex;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; molecular transducer activity;; transcription regulator activity	ion binding;; nucleic acid binding;; signal transducer activity;; transcription activator activity;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	adult behavior;; anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; behavior;; biosynthetic process;; cellular metabolic process;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; response to external stimulus;; system process
1755.6214	1879.8865	1887.1944	777.1228	898.0928	815.5303	0.00039592468	1.15064	10.84541	9.69477	1357272	1439153_at	13	chr13:47342806-47343264	13 A5			UGA	Mm.444782						  	Transcribed locus									
3573.6306	3884.1631	3800.3058	805.9278	988.0900	951.3946	0.00054159063	2.04052	11.87282	9.83230	1357281	1439163_at	9 A5.3|9 23.0 cM	chr9:48462424-48462942	9 A5.3			UG5	Mm.457803				235320		  Zbtb16	PLZF gene		Acute myeloid leukemia CLASS Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Acute myeloid leukemia [PATH:mmu05221];; Pathways in cancer	anterior/posterior pattern formation;; DNA binding;; embryonic hindlimb morphogenesis;; embryonic limb morphogenesis;; embryonic pattern specification;; forelimb morphogenesis;; leg morphogenesis;; male germ-line stem cell division;; metal ion binding;; negative regulation of cell proliferation;; negative regulation of transcription, DNA-dependent;; nucleus;; nucleus;; positive regulation of apoptosis;; protein binding;; protein binding;; regulation of transcription;; skeletal system development;; specific transcriptional repressor activity;; transcriptional repressor complex;; zinc ion binding	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	ion binding;; nucleic acid binding;; protein binding;; transcription repressor activity	biological regulation;; cellular process;; death;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell death;; cell division;; cell proliferation;; cellular developmental process;; cellular metabolic process;; embryonic development;; gamete generation;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; pattern specification process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; reproductive process;; sexual reproduction
93.8105	84.3978	86.6970	34.5174	36.3144	50.8549	0.017572419	1.14289	6.46291	5.32001	1357282	1439165_at	9	chr9:59325563-59326112	9 B			UG5	Mm.446631						  	Transcribed locus									
224.4195	203.8168	177.7075	92.1145	91.9549	98.6644	0.0040887578	1.09396	7.65151	6.55756	1357340	1439238_at	15 E1					UG5	Mm.202715				223697		  Unc84b	Unc-84 homolog B (C. elegans), mRNA (cDNA clone IMAGE:5325151)			condensed nuclear chromosome;; condensed nuclear chromosome;; endosome;; integral to membrane;; membrane;; nuclear chromosome, telomeric region;; nuclear chromosome, telomeric region;; nuclear envelope;; nuclear envelope;; nuclear envelope organization;; nucleus;; protein binding	cell;; cell part;; envelope;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle envelope;; organelle part	binding	protein binding	cellular component organization;; cellular process	membrane organization;; organelle organization
294.8061	284.7694	265.5554	120.6256	125.0834	115.7700	4.8505589e-05	1.22463	8.13671	6.91209	1357416	1439349_at	10 C1	chr10:79534037-79534504	10 C1			UGA	Mm.262102				216161		  Sbno2	Strawberry notch homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3376209)			macrophage activation during immune response;; negative regulation of transcription, DNA-dependent;; regulation of inflammatory response;; regulation of transcription, DNA-dependent;; transcription;; transcription repressor activity			transcription regulator activity	transcription repressor activity	biological regulation;; cellular process;; immune system process;; metabolic process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	biosynthetic process;; cell activation;; cellular metabolic process;; immune response;; leukocyte activation;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of response to stimulus;; response to external stimulus;; response to stress
205.9640	186.2001	225.0207	27.8535	75.4844	35.8652	0.030598228	2.27949	7.68029	5.40080	1357431	1439412_at		chr9:112004583-112004658	9 F3			IPA							  	ESTs									
719.6030	732.3940	712.9608	366.9347	364.6460	348.3911	5.3792936e-05	1.00364	9.49507	8.49143	1357452	1439488_at	10	chr10:80257696-80258171	10 C1			UGA	Mm.393160						  	Transcribed locus									
1303.2630	1235.3102	1450.9852	617.0575	608.3186	576.7630	0.00099137721	1.14387	10.37380	9.22993	1357496	1439537_at		chr6:31078869-31079400	6 A3.3			IPA							  	ESTs									
35.6331	50.8499	44.9737	17.9056	19.6579	16.9175	0.0066423458	1.25817	5.43811	4.17994	1357586	1439638_at	13	chr13:104615681-104616180	13 D1			UGA	Mm.442245						  	Transcribed locus									
734.1372	741.5407	600.4444	280.0701	234.0150	203.0847	0.0011224648	1.53938	9.42806	7.88868	1371475	1439740_s_at	1 H2.3	chr1:169153282-169153392	1 H2.3			UGA	Mm.440156				80914		  Uck2	Uridine-cytidine kinase 2, mRNA (cDNA clone IMAGE:3493906)		Drug metabolism - other enzymes;; Metabolic pathways CLASS Metabolism; Nucleotide Metabolism; Pyrimidine metabolism [PATH:mmu00240] Metabolism; Xenobiotics Biodegradation and Metabolism; Drug metabolism - other enzymes [PATH:mmu00983];; Pyrimidine metabolism	ATP binding;; kinase activity;; metabolic process;; nucleotide binding;; phosphotransferase activity, alcohol group as acceptor;; transferase activity;; uridine kinase activity			binding;; catalytic activity	nucleoside binding;; nucleotide binding;; transferase activity	metabolic process	
71.5221	61.6221	59.3640	38.8723	26.8697	24.8823	0.01874233	1.11053	5.99907	4.88854	1357855	1439933_at	6	chr6:93867831-93868325	6 D1			UGA	Mm.448178						  	Transcribed locus									
187.0768	211.0408	218.6582	92.4490	110.0140	87.4484	0.0014459286	1.09297	7.68047	6.58750	1357909	1439998_at	10 B5.1	chr10:66653931-66654467	10 B5.1			UGA	Mm.23846				108829		  Jmjd1c	Jumonji domain containing 1C, mRNA (cDNA clone IMAGE:3676222)			chromatin modification;; iron ion binding;; metal ion binding;; nucleus;; oxidation reduction;; oxidoreductase activity;; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ion binding;; oxidoreductase activity	biological regulation;; cellular component organization;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; organelle organization;; oxidation reduction;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
179.3804	127.1099	127.7575	53.4462	63.6421	72.3086	0.0055674282	1.18868	7.15803	5.96934	1357929	1440018_at		chr3:107243345-107243772	3 F2.3			IPA							  A330043J11Rik	RIKEN cDNA A330043J11 gene									
305.5309	299.4029	318.1556	64.0072	65.2502	54.0433	0.00060293683	2.33686	8.26490	5.92804	1357961	1440051_at						IPA							  	Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230017C05 product:hypothetical protein, full insert sequence.									
68.3447	62.2854	61.3614	25.6397	26.0670	24.4425	0.00010791921	1.33302	5.99828	4.66526	1358021	1440111_at		chr2:52800127-52800424	2 C1.1			IPA							  	ESTs									
345.2491	378.4152	371.7546	145.4263	144.2862	87.4598	0.020527676	1.57535	8.51118	6.93583	1358101	1440225_at	17 B3	chr17:43595923-43596473	17 B3			UG5	Mm.23478				224792		  Gpr116	G protein-coupled receptor 116 (Gpr116), mRNA			integral to membrane;; membrane;; plasma membrane	cell;; cell part	cell part;; membrane;; membrane part				
402.5401	470.9924	448.4297	65.0852	78.3354	77.9224	3.4575875e-05	2.58049	8.78043	6.19994	1358216	1440347_at	8	chr8:79889434-79889899	8 C1			UGA	Mm.438679						  	Transcribed locus									
116.9287	112.6836	119.9223	31.0515	38.0452	42.1382	0.0046176656	1.66276	6.86386	5.20110	1358233	1440365_at		chr16:37873054-37873603	16 B3			IPA							  	ESTs									
124.9121	111.1290	85.0647	44.0676	50.3311	48.5479	0.012329639	1.15166	6.72378	5.57212	1358405	1440543_at	12 C1	chr12:53010825-53011204	12 C1			UGA	Mm.131941				320487		  Heatr5a	HEAT repeat containing 5A, mRNA (cDNA clone MGC:99412 IMAGE:30544145)									
133.4714	137.0678	119.5531	50.3233	46.2386	62.3984	0.0034014386	1.30434	7.02021	5.71587	1358568	1440708_at	15 E1|15 43.3 cM					UGA	Mm.29677				17886	AL583886.1	  Myh9	Myosin, heavy polypeptide 9, non-muscle, mRNA (cDNA clone IMAGE:4913872)		Regulation of actin cytoskeleton CLASS Cellular Processes; Cell Motility; Regulation of actin cytoskeleton [PATH:mmu04810] Cellular Processes; Cell Communication; Tight junction [PATH:mmu04530];; Tight junction	actin binding;; actin filament binding;; actin filament-based movement;; actin-dependent ATPase activity;; ADP binding;; ATP binding;; calmodulin binding;; cell adhesion;; cell cortex;; cell morphogenesis involved in differentiation;; cell motion;; cell-cell adherens junction;; cell-cell adhesion;; cortical cytoskeleton;; cytoplasm;; establishment of meiotic spindle localization;; establishment of T cell polarity;; immunological synapse;; immunological synapse;; in utero embryonic development;; meiotic metaphase I;; meiotic spindle organization;; microfilament motor activity;; motor activity;; myoblast fusion;; myosin complex;; neuromuscular junction;; nucleotide binding;; plasma membrane;; plasma membrane;; protein binding;; regulation of cell shape;; spindle;; stress fiber;; stress fiber;; uropod;; uropod;; uropod organization	cell;; cell part;; macromolecular complex;; organelle;; organelle part;; synapse	cell part;; cell projection;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; neuromuscular junction;; non-membrane-bounded organelle;; organelle part;; protein complex;; trailing edge	binding;; catalytic activity	hydrolase activity;; nucleoside binding;; nucleotide binding;; protein binding	anatomical structure formation;; biological adhesion;; biological regulation;; cellular component organization;; cellular process;; developmental process;; establishment of localization;; immune system process;; localization;; multicellular organismal process;; regulation of biological process	actin filament-based process;; anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell activation;; cell adhesion;; cell cycle;; cell cycle process;; cell motion;; cell projection organization;; cellular component morphogenesis;; cellular developmental process;; cellular localization;; embryonic development;; establishment of localization;; establishment of localization in cell;; establishment of organelle localization;; establishment or maintenance of cell polarity;; leukocyte activation;; localization of cell;; membrane organization;; microtubule-based process;; multicellular organismal development;; organelle organization;; regulation of biological process;; regulation of biological quality;; regulation of cellular component organization;; regulation of cellular process;; regulation of developmental process;; syncytium formation;; transport
110.7055	109.2433	106.8279	40.1665	61.6805	47.5811	0.022923912	1.15138	6.76704	5.61566	1358586	1440728_at	14					UG5	Mm.400861						  	Transcribed locus									
403.3556	533.3844	408.7996	62.5685	100.1319	105.9936	0.0029840383	2.34974	8.79673	6.44699	1358631	1440776_at	5 C3.1	chr5:67139353-67139604	5 C3.1			UGA	Mm.374778				77569		  Limch1	LIM and calponin homology domains 1 (Limch1), mRNA			actin binding;; actomyosin structure organization;; metal ion binding;; zinc ion binding			binding	ion binding;; protein binding	cellular component organization;; cellular process	actin filament-based process;; organelle organization
319.0408	320.0548	340.7781	191.4574	181.4777	117.9626	0.040931472	1.02858	8.35082	7.32224	1371567	1440818_s_at	1 28.9 cM	chr1:55043911-55044022	1 C1.2	chr1:55042012-55084322	1 C1.2	RSQ	Mm.279736	NM_031179	1	1	81898		  Sf3b1	splicing factor 3b, subunit 1 (Sf3b1), mRNA.			anterior/posterior pattern formation;; binding;; chromatin binding;; mRNA processing;; nuclear mRNA splicing, via spliceosome;; nucleus;; protein binding;; RNA splicing;; RNA splicing factor activity, transesterification mechanism;; spliceosomal complex	cell;; cell part;; macromolecular complex;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle part;; ribonucleoprotein complex	binding;; catalytic activity	chromatin binding;; protein binding;; RNA splicing factor activity, transesterification mechanism	cellular process;; developmental process;; metabolic process;; multicellular organismal process	cellular metabolic process;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; pattern specification process;; primary metabolic process
156.4297	164.7850	147.7269	89.4151	77.5550	66.0139	0.0086147713	1.01877	7.28687	6.26810	1358665	1440847_at	15	chr15:58884333-58884882	15 D1			UGA	Mm.394414						  	Transcribed locus									
96.5529	96.5024	103.6766	60.6681	39.3869	42.1065	0.027192156	1.08774	6.62723	5.53949	1358691	1440878_at	16 62.2 cM	chr16:92601752-92602086	16 C4	chr16:92601710-92826311	16 C4	RSQ	Mm.4081	NM_001111022	4	1	12394		  Runx1	runt related transcription factor 1 (Runx1), transcript variant 2, mRNA.		Acute myeloid leukemia CLASS Human Diseases; Cancers; Pathways in cancer [PATH:mmu05200] Human Diseases; Cancers; Acute myeloid leukemia [PATH:mmu05221] Human Diseases; Cancers; Chronic myeloid leukemia [PATH:mmu05220];; Chronic myeloid leukemia;; Pathways in cancer	ATP binding;; behavioral response to pain;; central nervous system development;; definitive hemopoiesis;; DNA binding;; embryonic hemopoiesis;; in utero embryonic development;; liver development;; neuron development;; neuron differentiation;; nucleus;; positive regulation of angiogenesis;; protein binding;; regulation of transcription, DNA-dependent;; response to retinoic acid;; skeletal system development;; transcription;; transcription factor activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; transcription regulator activity	nucleic acid binding;; nucleoside binding;; nucleotide binding;; protein binding;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; immune system process;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; behavior;; biosynthetic process;; cellular developmental process;; cellular metabolic process;; embryonic development;; immune system development;; macromolecule metabolic process;; multicellular organismal development;; multicellular organismal response to stress;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of developmental process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; response to chemical stimulus;; response to external stimulus;; response to stress
402.8916	413.1497	410.4421	221.3186	225.9248	161.7630	0.021885494	1.02613	8.67527	7.64914	1358736	1440926_at	5	chr5:148446897-148447256	5 G3			UGA	Mm.458302						  	Transcribed locus									
42.8220	42.6328	54.9066	15.8568	30.1893	22.2342	0.039881441	1.07846	5.53769	4.45924	1358830	1441030_at	15 A2	chr15:10619119-10619604	15 A1			UGA	Mm.212395				75646		  Rai14	Retinoic acid induced 14 (Rai14), mRNA			cytoplasm;; cytoskeleton;; mitochondrion	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle				
63.4025	82.1758	77.4065	21.4368	26.5328	20.5512	0.00044849522	1.70287	6.20716	4.50429	1358927	1441129_at	5	chr5:93535215-93535741	5 E2			UGA	Mm.450589						  	Transcribed locus									
237.6343	201.2525	205.6262	99.8509	107.9631	104.6264	0.0016593199	1.04138	7.74311	6.70173	1359019	1441230_at		chr3:27511416-27511951	3 A3			IPA							  	ESTs									
55.0467	58.0709	41.4609	21.1906	26.7098	19.2163	0.0043846322	1.20237	5.67200	4.46963	1359020	1441231_at	11 A1|11	chr11:5327308-5327648	11 A1			UG5	Mm.425674				100042016		  100042016	PREDICTED: Mus musculus hypothetical protein LOC100042016 (LOC100042016), mRNA									
105.4356	107.4385	109.9678	60.5906	50.5981	44.9012	0.012513214	1.05927	6.74951	5.69024	1371605	1441315_s_at	1 87.0 cM	chr1:166195326-166195426	1 H2.2	chr1:166179185-166195500	1 H2.2	RSQ	Mm.35444	NM_054087	1	1	116914		  Slc19a2	solute carrier family 19 (thiamine transporter), member 2 (Slc19a2), mRNA.			plasma membrane;; thiamin transmembrane transporter activity;; thiamin transport	cell;; cell part	cell part;; membrane	transporter activity	substrate-specific transporter activity;; transmembrane transporter activity;; vitamin transporter activity	establishment of localization;; localization	establishment of localization;; transport
350.0812	335.9187	360.3314	87.3463	84.5908	84.5109	8.2756879e-06	2.02818	8.44556	6.41739	1359131	1441360_at		chrX:155711702-155712021	X F4			IPA							  	ESTs, Moderately similar to S12207 hypothetical protein (B2 element) - mouse [M.musculus]									
110.9231	122.6275	113.0433	40.2513	37.9703	49.8934	0.0030787549	1.44458	6.85076	5.40618	1359142	1441372_at	18	chr18:68108128-68108625	18 E2			UGA	Mm.446015						  	Transcribed locus									
61.2249	72.2706	67.9515	17.8593	30.5035	28.6184	0.021291402	1.42315	6.06594	4.64279	1359145	1441375_at		chr6:94636705-94637233	6 D2			IPA							  	ESTs									
61.5857	66.7412	60.4484	17.0989	20.1133	23.2670	0.0029259937	1.65218	5.97422	4.32204	1359158	1441388_at	18 E2|18 44.0 cM	chr18:70788193-70788698	18 E2			UGA	Mm.322				17191		  Mbd2	Methyl-CpG binding domain protein 2 (Mbd2), mRNA			cellular protein complex assembly;; chromatin;; chromatin binding;; cytoplasm;; DNA binding;; heterochromatin;; histone deacetylase complex;; maternal behavior;; methyl-CpG binding;; mRNA binding;; negative regulation of transcription from RNA polymerase II promoter;; nucleolus;; nucleus;; positive regulation of Wnt receptor signaling pathway;; regulation of cell proliferation;; regulation of transcription, DNA-dependent;; siRNA binding;; transcription	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding	chromatin binding;; nucleic acid binding;; nucleotide binding	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; response to stimulus	behavior;; biosynthetic process;; cell communication;; cell proliferation;; cellular component assembly;; cellular macromolecular complex subunit organization;; cellular metabolic process;; macromolecular complex subunit organization;; macromolecule metabolic process;; multicellular organism reproduction;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; primary metabolic process;; protein complex biogenesis;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; reproductive behavior;; reproductive process;; reproductive process in a multicellular organism
98.7170	102.9127	90.3403	34.1662	30.8210	27.0988	0.00046337603	1.66910	6.60260	4.93350	1359231	1441467_at	3	chr3:138436873-138437414	3 H1			UG5	Mm.417274						  	Transcribed locus									
178.3306	189.0532	180.0455	88.5520	100.7077	79.9473	0.005721998	1.02994	7.51109	6.48115	1359271	1441507_at	11 A3.3|11 13.0 cM	chr11:30117994-30118404	11 A3.3			UGA	Mm.123110				20742	RP23-189P1.1	  Spnb2	Mus musculus, clone IMAGE:4951562, mRNA		Tight junction CLASS Cellular Processes; Cell Communication; Tight junction [PATH:mmu04530]	actin binding;; actin filament capping;; calmodulin binding;; common-partner SMAD protein phosphorylation;; cortical cytoskeleton;; cytoplasm;; cytoskeleton;; membrane;; nucleus;; plasma membrane;; protein binding;; SMAD protein nuclear translocation;; spectrin;; structural constituent of cytoskeleton	cell;; cell part;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part	binding;; structural molecule activity	protein binding;; structural constituent of cytoskeleton	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; establishment of localization;; localization;; metabolic process;; negative regulation of biological process;; regulation of biological process	actin filament-based process;; cell communication;; cellular component assembly;; cellular component disassembly;; cellular localization;; cellular macromolecular complex subunit organization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; establishment of protein localization;; macromolecular complex subunit organization;; macromolecule localization;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular component organization;; negative regulation of cellular process;; negative regulation of metabolic process;; organelle organization;; primary metabolic process;; protein complex biogenesis;; regulation of biological process;; regulation of biological quality;; regulation of cellular component biogenesis;; regulation of cellular component organization;; regulation of cellular process;; regulation of metabolic process;; transport
86.6902	102.3660	115.2089	36.9799	58.6760	51.3774	0.015726337	1.06569	6.65450	5.58881	1359292	1441529_at		chr11:22757572-22758125	11 A3.2			IPA							  	ESTs									
295.8671	252.2945	262.4004	63.4255	79.3802	85.1542	0.00095211134	1.83790	8.07447	6.23657	1359294	1441531_at	2 F3|2 77.0 cM	chr2:135486868-135487311	2 F3			UGA	Mm.38009				18798	RP23-7A19.1	  Plcb4	Phospholipase C beta 4 [Mus musculus], mRNA sequence		Alzheimer's disease;; Calcium signaling pathway;; Chemokine signaling pathway;; Gap junction;; GnRH signaling pathway;; Huntington's disease CLASS Metabolism; Carbohydrate Metabolism; Inositol phosphate metabolism [PATH:mmu00562] Environmental Information Processing; Signal Transduction; Wnt signaling pathway [PATH:mmu04310] Environmental Information Processing; Signal Transduction; Calcium signaling pathway [PATH:mmu04020] Environmental Information Processing; Signal Tr;; Inositol phosphate metabolism;; Long-term depression;; Long-term potentiation;; Melanogenesis;; Metabolic pathways;; Phosphatidylinositol signaling system;; Vascular smooth muscle contraction;; Wnt signaling pathway	dendrite;; microsome;; nucleus;; postsynaptic density;; protein binding;; signal transducer activity;; signal transduction;; smooth endoplasmic reticulum	cell;; cell part;; organelle;; organelle part;; synapse;; synapse part	cell fraction;; cell part;; cell projection;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part;; postsynaptic density;; synapse part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
173.8961	194.4956	192.6397	72.5843	105.3909	92.1812	0.013941737	1.06928	7.54515	6.47586	1359354	1441592_at	10	chr10:66595201-66595683	10 B5.1			UGA	Mm.440483						  	Transcribed locus									
266.1519	287.5964	250.5536	121.7676	132.4307	119.1528	0.0001543038	1.10641	8.06433	6.95792	1359356	1441594_at		chr5:104199317-104199794	5 E5			IPA							  	Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130072L14 product:unclassifiable, full insert sequence.									
295.7682	330.0745	288.4852	43.1577	49.2335	33.4377	0.0012348887	2.87694	8.24911	5.37217	1359551	1441799_at		chr17:28557117-28557366	17 A3.3			IPA							  	ESTs									
244.3128	237.3712	216.6854	111.3767	148.9563	91.4507	0.031623355	1.01669	7.86102	6.84432	1359571	1441823_at	14 A3	chr14:26357806-26357946	14 A3			UGA	Mm.227484				328365		  Zmiz1	Zinc finger, MIZ-type containing 1, mRNA (cDNA clone MGC:86031 IMAGE:6856060)			artery morphogenesis;; cell aging;; cytoplasm;; developmental growth;; heart morphogenesis;; in utero embryonic development;; metal ion binding;; nucleus;; positive regulation of fibroblast proliferation;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; vasculogenesis;; vitellogenesis;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; protein binding	biological regulation;; cellular component organization;; cellular process;; developmental process;; growth;; metabolic process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process	aging;; anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell aging;; cell proliferation;; cellular developmental process;; cellular metabolic process;; cytoplasm organization;; developmental growth;; embryonic development;; gamete generation;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; reproductive process;; sexual reproduction
419.7053	421.7728	441.5506	147.9853	74.7760	87.1173	0.018845426	2.11376	8.74000	6.62623	1371637	1441843_s_at	2	chr2:52729244-52729333	2 C1.1			UGA	Mm.274277						  	Transcribed locus									
157.2023	157.9271	156.1753	20.3063	20.1412	27.7300	0.0028937442	2.80577	7.29554	4.48977	1359586	1441858_at						IPA							  	Unknown									
65.5719	61.6627	60.3553	21.1196	17.6383	18.1671	0.00047838982	1.72411	5.96558	4.24147	1371720	1441956_s_at	5 G2|5 78.0 cM	chr5:136958783-136958847	5 G2			UGA	Mm.320317				13047		  Cux1	CDNA fis, clone TRACH2005314,highly similar to Mus musculus mCASP (cux) mRNA			auditory receptor cell differentiation;; chromatin binding;; DNA binding;; Golgi apparatus;; integral to Golgi membrane;; integral to membrane;; intra-Golgi vesicle-mediated transport;; lung development;; membrane;; multicellular organismal development;; negative regulation of transcription from RNA polymerase II promoter;; nucleus;; regulation of transcription;; regulation of transcription, DNA-dependent;; sequence-specific DNA binding;; transcription;; transcription factor activity;; transcription regulator activity;; transcription repressor activity;; transport	cell;; cell part;; organelle;; organelle part	cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	binding;; transcription regulator activity	chromatin binding;; nucleic acid binding;; transcription factor activity;; transcription repressor activity	biological regulation;; cellular process;; developmental process;; establishment of localization;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process	anatomical structure development;; biosynthetic process;; cellular developmental process;; cellular localization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; transport;; vesicle-mediated transport
446.4232	420.8379	429.3190	148.0572	154.5219	183.6745	0.0027521772	1.42087	8.75510	7.33423	1359623	1441976_at	15	chr15:36180185-36180568	15 B3.1			UGA	Mm.440854						  	Transcribed locus									
44.3586	44.2345	54.2114	20.3846	22.7303	20.3275	0.0015889793	1.16582	5.56626	4.40044	1359760	1442121_at	9 59.0 cM					IPA							  Ppp1r1c	protein phosphatase 1, regulatory (inhibitor) subunit 1C									
304.1689	325.3140	353.0964	110.9662	114.2588	115.7375	0.00079712253	1.52450	8.35278	6.82828	1359813	1442176_at	10	chr10:67558667-67559135	10 B5.1	chr10:67558340-67741474	10 B5.1	RSQ	Mm.440357	NM_023598	1	1	71371		  Arid5b	AT rich interactive domain 5B (MRF1-like) (Arid5b), mRNA.			DNA binding;; face morphogenesis;; fibroblast migration;; intracellular;; kidney development;; multicellular organism growth;; muscle organ morphogenesis;; nitrogen compound metabolic process;; nucleus;; palate development;; platelet-derived growth factor receptor signaling pathway;; post-embryonic development;; regulation of transcription, DNA-dependent;; skeletal system morphogenesis;; transcription	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	nucleic acid binding	biological regulation;; cellular process;; developmental process;; growth;; localization;; locomotion;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; anatomical structure morphogenesis;; biosynthetic process;; cell communication;; cell motility;; cell motion;; cellular metabolic process;; localization of cell;; macromolecule metabolic process;; multicellular organism growth;; multicellular organismal development;; nitrogen compound metabolic process;; post-embryonic development;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
172.1911	167.7231	158.4300	69.5626	67.8512	64.5644	1.181016e-05	1.30277	7.37517	6.07240	1359818	1442181_at		chr7:17108708-17109244	7 A2			IPA							  	ESTs									
140.4297	115.5820	141.8017	51.4498	54.6219	71.2926	0.0040737537	1.17401	7.04474	5.87073	1359876	1442241_at	5	chr5:23092186-23092646	5 A3			UGA	Mm.443009						  	Transcribed locus									
486.8951	448.0872	449.9860	184.1371	184.4923	222.1304	0.0016929202	1.23384	8.84961	7.61577	1359922	1442288_at	11 B1.3|11 29.5 cM	chr11:54844602-54845026	11 B1.3			UGA	Mm.265347				11749		  Anxa6	Annexin A6, mRNA (cDNA clone MGC:6574 IMAGE:3482035)			calcium ion binding;; calcium ion transport;; calcium-dependent phospholipid binding;; cytoplasm;; perinuclear region of cytoplasm;; regulation of muscle contraction	cell;; cell part	cell part;; intracellular;; intracellular part	binding	ion binding;; lipid binding	biological regulation;; establishment of localization;; localization;; multicellular organismal process;; regulation of biological process	establishment of localization;; regulation of biological process;; regulation of multicellular organismal process;; system process;; transport
88.3980	99.7794	88.2863	49.5876	49.3882	39.4287	0.0036576778	1.00385	6.52358	5.51973	1359942	1442309_at	12	chr12:3829047-3829288	12 A1.1			UGA	Mm.443753						  	Transcribed locus									
75.2059	58.8194	76.4777	30.3606	28.3610	28.2900	0.0061382665	1.26526	6.12265	4.85739	1359967	1442336_at		chr15:77657346-77657609	15 E1			IPA							  	ESTs, Weakly similar to I58401 protein-tyrosine kinase (EC 2.7.1.112) JAK3 - mouse [M.musculus]									
352.1864	379.1085	349.1038	129.0508	139.6671	156.4074	0.00083664117	1.34912	8.49139	7.14227	1360008	1442382_at	13 D1	chr13:103559646-103562570	13 D1			UGA	Mm.202606				328329		  Mast4	MKIAA0303 protein			ATP binding;; cytoplasm;; kinase activity;; magnesium ion binding;; metal ion binding;; nucleotide binding;; protein amino acid phosphorylation;; protein binding;; protein kinase activity;; protein serine/threonine kinase activity;; transferase activity	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; catalytic activity	ion binding;; nucleoside binding;; nucleotide binding;; protein binding;; transferase activity	cellular process;; metabolic process	cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
635.3268	556.4423	554.1874	67.0231	172.8667	154.7860	0.032253691	2.25715	9.18189	6.92474	1360020	1442395_at	1	chr1:34085393-34085906	1 B			UGA	Mm.436779						  	Transcribed locus									
810.7263	796.9055	809.7142	403.2840	306.6368	398.7561	0.012432653	1.13573	9.65420	8.51847	1360303	1442700_at	4 C6|4 46.8 cM	chr4:102243528-102243998	4 C6			UGA	Mm.20181				18578	RP23-57D24.1	  Pde4b	Phosphodiesterase 4B, cAMP specific, mRNA (cDNA clone IMAGE:5354427)		Purine metabolism CLASS Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mmu00230]	3',5'-cyclic-AMP phosphodiesterase activity;; smooth muscle contraction			catalytic activity	hydrolase activity	multicellular organismal process	system process
1114.5956	1047.2592	1032.7740	291.8388	239.1054	373.2075	0.0083254007	1.84422	10.05567	8.21145	1360313	1442710_at		chr3:142052865-142053312	3 H1			IPA							  	ESTs									
108.3114	94.5578	86.2277	17.9689	22.0659	24.8968	0.00040049656	2.16106	6.58408	4.42302	1360328	1442725_at	11					UG5	Mm.419280						  	Transcribed locus									
163.2630	158.7630	159.4576	36.7855	44.6911	34.0372	0.0029006618	2.06893	7.32627	5.25734	1360350	1442750_at	13 A1	chr13:14064362-14064580	13 A1			UG5	Mm.21686				97884		  B3galnt2	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2, mRNA (cDNA clone MGC:103263 IMAGE:30735904)			acetylgalactosaminyltransferase activity;; galactosyltransferase activity;; Golgi apparatus;; integral to membrane;; membrane;; protein amino acid glycosylation;; transferase activity;; transferase activity, transferring glycosyl groups;; UDP-N-acetylgalactosamine metabolic process	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle	catalytic activity	transferase activity	cellular process;; metabolic process	alcohol metabolic process;; biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process
190.0408	204.3828	202.6011	93.3454	97.1084	97.3405	5.9055846e-05	1.05226	7.63593	6.58367	1371742	1442760_x_at		chr11:29616149-29616353	11 A3.3			IPA							  	ESTs									
50.7236	53.3655	54.1636	18.2843	21.4093	21.6638	0.0012728203	1.37059	5.72056	4.34997	1360461	1442880_at	16	chr16:34559830-34560160	16 B3			UGA	Mm.24752						  	Transcribed locus									
215.5388	208.2831	213.1139	67.4483	66.3242	65.9911	4.8389121e-07	1.67277	7.72990	6.05712	1360495	1442916_at	8	chr8:70533034-70533494	8 B3.3			UGA	Mm.403977						  	Transcribed locus									
46.3576	71.5632	75.0926	26.5192	29.7341	35.3256	0.023539672	1.05361	5.97549	4.92188	1360531	1442956_at		chr12:113090683-113091202	12 F1			IPA							  	Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930009B01 product:unknown EST, full insert sequence.									
110.8251	106.4425	105.9811	18.8508	23.0231	24.8187	0.0020931879	2.28627	6.75124	4.46497	1360542	1442967_at	8	chr8:80016360-80016899	8 C1			UGA	Mm.394850						  	Transcribed locus									
172.1387	207.6292	189.9008	47.5895	50.3558	77.0885	0.0091682908	1.73310	7.56480	5.83170	1360637	1443069_at	11	chr11:108041099-108041513	11 E1			UGA	Mm.447682						  	Transcribed locus									
236.1724	255.5325	243.2201	71.4720	100.2443	83.6406	0.0060295051	1.53812	7.93573	6.39760	1360727	1443159_at	10 C1	chr10:82357178-82357468	10 C1			UGA	Mm.210155				50493		  Txnrd1	Thioredoxin reductase 1, mRNA (cDNA clone MGC:46868 IMAGE:5059831)		Pyrimidine metabolism CLASS Metabolism; Nucleotide Metabolism; Pyrimidine metabolism [PATH:mmu00240]	cell proliferation;; cell redox homeostasis;; cytoplasm;; cytosol;; FAD binding;; gastrulation;; mesoderm formation;; NADP or NADPH binding;; nucleus;; oxidation reduction;; oxidoreductase activity;; selenium binding;; thioredoxin-disulfide reductase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	antioxidant activity;; binding;; catalytic activity	cofactor binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity;; selenium binding;; thioredoxin-disulfide reductase activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cell proliferation;; cellular homeostasis;; embryonic development;; multicellular organismal development;; oxidation reduction;; regulation of biological process;; regulation of biological quality;; regulation of cellular process
189.0735	161.3662	150.8610	66.0016	54.3055	60.7490	0.00036639432	1.46728	7.37802	5.91075	1360752	1443184_at	3 G1	chr3:116122738-116123185	3 G1			UGA	Mm.17647				229776		  Cdc14a	CDC14 cell division cycle 14 homolog A (S. cerevisiae) (Cdc14a), mRNA		Cell cycle CLASS Cellular Processes; Cell Growth and Death; Cell cycle [PATH:mmu04110]	cell cycle;; cell division;; dephosphorylation;; hydrolase activity;; nucleus;; phosphatase activity;; phosphoprotein phosphatase activity;; protein amino acid dephosphorylation;; protein tyrosine phosphatase activity;; protein tyrosine/serine/threonine phosphatase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	catalytic activity	hydrolase activity	cellular process;; metabolic process	cell cycle;; cell division;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
85.4342	95.8322	90.8806	17.2148	22.3893	21.5777	0.00092177589	2.16110	6.50169	4.34060	1360780	1443212_at		chr8:75853675-75854162	8 B3.3			IPA							  	ESTs									
379.3940	467.5063	384.8710	127.9102	182.0265	147.5609	0.0022710252	1.43749	8.67488	7.23739	1360856	1443289_at	13	chr13:110571699-110572038	13 D2.2			UGA	Mm.438644						  	Transcribed locus									
1352.6141	1341.0749	1312.3666	553.2205	721.0148	717.3226	0.014247984	1.01886	10.38289	9.36402	1360866	1443299_at	8 B1.1	chr8:46988445-46988717	8 B1.1			UGA	Mm.282900				53318		  Pdlim3	PDZ and LIM domain 3 (Pdlim3), mRNA			actin cytoskeleton;; actin filament organization;; cytoplasm;; cytoskeletal protein binding;; heart development;; metal ion binding;; protein binding;; skeletal muscle tissue development;; structural constituent of muscle;; structural constituent of muscle;; Z disc;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; non-membrane-bounded organelle	binding;; structural molecule activity	ion binding;; protein binding;; structural constituent of muscle	cellular component organization;; cellular process;; developmental process;; multicellular organismal process	actin filament-based process;; anatomical structure development;; multicellular organismal development;; organelle organization
81.0221	90.9414	77.0503	32.7734	37.0729	24.2394	0.0085988014	1.42294	6.37161	4.94868	1360905	1443341_at		chr6:86724341-86724697	6 D1			IPA							  	ESTs									
69.6108	58.2016	72.3165	35.1483	34.1171	26.4292	0.0036538216	1.06954	6.05349	4.98396	1360981	1443430_at	10	chr10:94753539-94754027	10 C2			IPA	Mm.218009						  	Transcribed locus, strongly similar to NP_034080.1 CASP2 and RIPK1 domain containing adaptor with death domain [Mus musculus]									
326.0674	351.6342	316.6741	130.7251	182.4987	137.0706	0.011175876	1.15763	8.37127	7.21364	1361015	1443471_at	16 B4|16 28.9 cM	chr16:43613020-43613517	16 B4			UGA	Mm.440824				56490	RP23-283M18.1	  Zbtb20	Zinc finger and BTB domain containing 20, mRNA (cDNA clone MGC:35911 IMAGE:4971586)			DNA binding;; intracellular;; metal ion binding;; nucleic acid binding;; nucleus;; protein binding;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding;; protein binding	biological regulation;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
481.5816	499.9571	426.7572	179.0172	203.0281	161.4058	0.00051818212	1.37684	8.87152	7.49468	1361044	1443503_at	17 A3.3					IPA	Mm.209679						  Ip6k3	Inositol hexaphosphate kinase 3, mRNA (cDNA clone MGC:176224 IMAGE:9055875)									
186.4252	175.2630	147.1039	58.2837	71.0292	59.2253	0.00051015016	1.43101	7.39884	5.96784	1361052	1443511_at	9	chr9:68763941-68764383	9 C			UGA	Mm.445349						  	Transcribed locus									
119.9270	158.5883	164.7428	75.3302	65.3387	74.2698	0.0091789238	1.03317	7.19308	6.15991	1361083	1443544_at		chr18:68137416-68137770	18 E2			IPA							  	ESTs									
74.4958	82.3863	65.4243	17.8622	21.3373	27.4897	0.0031198216	1.75340	6.20506	4.45165	1361128	1443593_at		chr16:22134185-22134615	16 B1			IPA							  	Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430085A14 product:unknown EST, full insert sequence.									
69.8172	64.1338	70.7098	22.9933	18.6346	16.6335	0.0028829094	1.82443	6.09079	4.26636	1361161	1443630_at		chr3:136399370-136399659	3 G3			IPA							  	ESTs, Weakly similar to  RIKEN cDNA 5730493B19 [Mus musculus] [M.musculus]									
125.6585	163.4560	133.2735	48.2582	41.7653	33.6439	0.0010020525	1.77839	7.12812	5.34974	1371794	1443721_x_at	10 C1	chr10:79529116-79529323	10 C1			UG5	Mm.262102				216161		  Sbno2	Strawberry notch homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3376209)			macrophage activation during immune response;; negative regulation of transcription, DNA-dependent;; regulation of inflammatory response;; regulation of transcription, DNA-dependent;; transcription;; transcription repressor activity			transcription regulator activity	transcription repressor activity	biological regulation;; cellular process;; immune system process;; metabolic process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	biosynthetic process;; cell activation;; cellular metabolic process;; immune response;; leukocyte activation;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of response to stimulus;; response to external stimulus;; response to stress
157.5485	150.5914	154.0703	73.3026	79.7444	60.4124	0.0095634842	1.12391	7.26720	6.14329	1361305	1443848_at		chr17:3296637-3296684	17 A1			IPA							  	ESTs									
56.7601	49.6189	54.2289	24.0501	23.1634	28.5558	0.0013806693	1.08772	5.74020	4.65249	1361356	1443905_at	5	chr5:130054203-130054757	5 G1.3			UGA	Mm.441771						  	Transcribed locus									
6060.1090	6164.7448	6182.4311	2017.0201	3019.9332	3655.0646	0.046812008	1.12497	12.58297	11.45800	1361527	1444083_at	2 44.0 cM	chr2:76783445-76783867	2 C3			RSQ	Mm.373672	NM_028004	2	1	22138	RP23-82M15.1	  Ttn	titin (Ttn), transcript variant N2-B, mRNA.			A band;; adult heart development;; ATP binding;; calcium ion binding;; calmodulin binding;; cardiac myofibril assembly;; cytoplasm;; forward locomotion;; heart morphogenesis;; I band;; in utero embryonic development;; kinase activity;; M band;; magnesium ion binding;; metal ion binding;; muscle contraction;; muscle myosin complex;; nucleotide binding;; nucleus;; protein amino acid phosphorylation;; protein binding;; protein kinase activity;; protein serine/threonine kinase activity;; sarcomere;; sarcomere organization;; sarcomere organization;; somitogenesis;; striated muscle cell development;; structural constituent of cytoskeleton;; structural constituent of muscle;; transferase activity;; Z disc	cell;; cell part;; macromolecular complex;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; non-membrane-bounded organelle;; organelle part;; protein complex	binding;; catalytic activity;; structural molecule activity	ion binding;; nucleoside binding;; nucleotide binding;; protein binding;; structural constituent of cytoskeleton;; structural constituent of muscle;; transferase activity	anatomical structure formation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; locomotion;; metabolic process;; multicellular organismal process	actin filament-based process;; anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; cellular component assembly;; cellular component morphogenesis;; cellular developmental process;; cellular metabolic process;; directional locomotion;; embryonic development;; macromolecule metabolic process;; multicellular organismal development;; organelle organization;; pattern specification process;; primary metabolic process;; system process
50.4729	49.4122	48.9142	23.0751	23.0046	27.6615	0.0064026567	1.01816	5.63214	4.61398	1361603	1444164_at	12	chr12:66171717-66172185	12 C1			UGA	Mm.442333						  	Transcribed locus									
99.2769	93.9087	95.8318	49.8596	51.7712	41.2516	0.0072249143	1.02292	6.58967	5.56675	1361781	1444349_at		chr15:96135816-96136234	15 F1			IPA							  	ESTs, Highly similar to S12207 hypothetical protein (B2 element) - mouse [M.musculus]									
62.7367	68.4653	71.2794	19.3327	25.2033	36.4604	0.031272501	1.36906	6.07465	4.70559	1361787	1444355_at	5 C3.1	chr5:68196657-68197155	5 C3.1			UGA	Mm.153230				11980		  Atp8a1	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (Atp8a1), transcript variant 2, mRNA			ATP binding;; ATP biosynthetic process;; ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;; catalytic activity;; cytoplasmic vesicle;; hydrolase activity;; hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;; integral to membrane;; magnesium ion binding;; membrane;; metabolic process;; metal ion binding;; nucleotide binding;; phospholipid transport;; phospholipid-translocating ATPase activity	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; vesicle	binding;; catalytic activity;; transporter activity	hydrolase activity;; ion binding;; nucleoside binding;; nucleotide binding;; substrate-specific transporter activity;; transmembrane transporter activity	cellular process;; establishment of localization;; localization;; metabolic process	biosynthetic process;; cellular metabolic process;; establishment of localization;; nitrogen compound metabolic process;; primary metabolic process;; transport
234.3698	213.4930	173.1746	65.1724	78.1472	79.7813	0.001183738	1.47149	7.68226	6.21076	1361920	1444489_at	2 C2					UGA	Mm.30928				78830	RP23-299A2.2	  Slc25a12	Solute carrier family 25 (mitochondrial carrier, Aralar), member 12, mRNA (cDNA clone MGC:67718 IMAGE:6311836)			binding;; calcium ion binding;; integral to membrane;; malate-aspartate shuttle;; membrane;; mitochondrial inner membrane;; mitochondrial inner membrane;; mitochondrion;; mitochondrion;; transport;; transporter activity	cell;; cell part;; envelope;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle envelope;; organelle membrane;; organelle part	binding;; transporter activity	ion binding	cellular process;; establishment of localization;; localization;; metabolic process	cellular localization;; cellular metabolic process;; establishment of localization;; establishment of localization in cell;; oxidation reduction;; transport
144.7766	153.0817	115.2967	43.3699	54.6411	49.9505	0.00097202554	1.47736	7.09502	5.61766	1362068	1444645_at	11	chr11:20451270-20451705	11 A3.1			UG5	Mm.449965						  	Transcribed locus									
86.7458	93.7287	89.3794	35.8851	48.9263	41.5563	0.0098566834	1.10539	6.49034	5.38495	1362172	1444749_at	16	chr16:31305712-31306199	16 B2			UGA	Mm.436754						  	Transcribed locus									
958.4100	945.1917	902.3013	136.0379	172.2246	167.8797	0.0010411162	2.56638	9.86881	7.30243	1362387	1444973_at		chr14:24571790-24572277	14 A3			IPA							  	ESTs									
46.4887	45.2973	41.1405	14.8656	19.4000	22.6184	0.013621896	1.24378	5.46755	4.22377	1362441	1445028_at	11	chr11:107899559-107900120	11 E1			UGA	Mm.448692						  	Transcribed locus									
248.1519	219.4084	234.4187	104.4197	93.6171	96.9214	5.9265989e-05	1.25060	7.86850	6.61790	1362558	1445148_at		chr1:55487728-55488266	1 C1.2			IPA							  	Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230091K16 product:unknown EST, full insert sequence.									
100.3992	94.9140	98.7907	34.1323	33.0605	34.5397	1.7754817e-06	1.53139	6.61482	5.08343	1362606	1445200_at		chr14:121449800-121450181	14 E5			IPA							  	ESTs, Moderately similar to  RIKEN cDNA 5730493B19 [Mus musculus] [M.musculus]									
197.2977	203.6983	210.3972	82.1361	121.9641	101.4529	0.022785558	1.01886	7.67050	6.65164	1362679	1445273_at		chr10:66562127-66562494	10 B5.1			IPA							  	ESTs, Moderately similar to S12207 hypothetical protein (B2 element) - mouse [M.musculus]									
328.6624	337.6353	313.1603	69.2576	82.7807	94.5636	0.0027573921	2.00074	8.35018	6.34945	1362797	1445395_at	11	chr11:108132382-108132923	11 E1			UGA	Mm.443896						  	Transcribed locus									
351.0118	343.7526	347.9196	78.4704	83.7358	76.9620	0.00014939259	2.12510	8.44107	6.31597	1362800	1445398_at	5	chr5:67306909-67307387	5 C3.1			UGA	Mm.454791						  	Transcribed locus									
360.0408	421.2584	402.3972	160.0409	168.0797	184.0005	0.00019300245	1.20806	8.62102	7.41295	1362845	1445443_at		chr7:52694090-52694571	7 B4			IPA							  	ESTs, Weakly similar to I58401 protein-tyrosine kinase (EC 2.7.1.112) JAK3 - mouse [M.musculus]									
1148.0142	1246.0130	1230.3134	114.9731	143.4127	168.1867	0.0017046598	3.10325	10.23761	7.13437	1362958	1445562_at		chr9:48638602-48638777	9 A5.3			IPA							  	ESTs									
29.0072	21.0493	22.7311	9.6515	9.8637	10.6158	0.0077753575	1.25987	4.58688	3.32701	1362992	1445598_at		chr8:60092946-60093299	8 B2			IPA							  	ESTs									
185.1367	191.9254	193.2910	91.6914	96.0601	95.8460	4.8650289e-06	1.00808	7.57049	6.56241	1362994	1445600_at		chr7:75180133-75180541	7 D1			IPA							  	ESTs									
93.4520	109.2569	88.0225	38.5707	58.2108	39.0783	0.015613648	1.11886	6.59251	5.47365	1363080	1445695_at	13	chr13:45701247-45701513	13 A5			UGA	Mm.453409						  	Transcribed locus									
321.4407	327.4148	322.8254	74.9895	76.0959	120.0523	0.013711582	1.87737	8.33933	6.46196	1363152	1445774_at		chr14:24589566-24590021	14 A3			IPA							  	Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330037B11 product:unknown EST, full insert sequence.									
78.9087	61.2710	75.7856	28.5508	34.7242	40.9233	0.0060782452	1.05831	6.16103	5.10272	1363227	1445850_at	1 F	chr1:136676358-136676868	1 E4			UGA	Mm.188709				329251		  Ppp1r12b	Protein phosphatase 1, regulatory (inhibitor) subunit 12B, mRNA (cDNA clone MGC:175633 IMAGE:40131049)		Vascular smooth muscle contraction CLASS Cellular Processes; Circulatory System; Vascular smooth muscle contraction [PATH:mmu04270]	cytoplasm	cell;; cell part	cell part;; intracellular;; intracellular part				
386.1633	352.0731	311.2328	80.9814	94.9356	85.5210	0.0001011392	2.00268	8.44488	6.44220	1363243	1445866_at		chr13:103556977-103557456	13 D1			IPA							  	ESTs									
221.0408	199.6425	195.1083	75.5634	88.6640	109.6386	0.0099998021	1.18369	7.67919	6.49550	1363268	1445892_at	1 C5	chr1:93338360-93338775	1 D			IPA	Mm.218141						  Per2	Period homolog 2 (Drosophila) (Per2), mRNA									
81.4570	85.1962	91.2654	28.9049	35.0073	45.7674	0.017825043	1.25787	6.42423	5.16636	1363275	1445900_at		chr16:34085173-34085489	16 B3			IPA							  	ESTs									
132.3950	120.9487	139.6691	48.6278	58.2343	56.3075	0.0003348494	1.27002	7.03094	5.76092	1363294	1445919_at		chr8:60059065-60059586	8 B2			IPA							  	ESTs									
449.1228	455.1874	446.7451	107.9912	133.3187	110.7071	0.0022793629	1.94683	8.81486	6.86804	1363341	1445966_at	17	chr17:12945147-12945628	17 A1			UGA	Mm.411497						  	Transcribed locus									
44.5572	45.8407	46.6734	24.1846	22.2959	22.0364	0.00032741341	1.00138	5.51356	4.51218	1363468	1446095_at	17	chr17:12957498-12957975	17 A1			UGA	Mm.394955						  	Transcribed locus									
54.2646	52.1852	50.3571	20.1831	29.0232	29.2576	0.025797799	1.01889	5.70721	4.68832	1363480	1446107_at		chr14:121705469-121706005	14 E5			IPA							  	ESTs									
103.2695	124.3964	120.8903	48.6263	42.3994	57.1995	0.0020724092	1.23969	6.85554	5.61586	1363491	1446118_at		chr17:30161295-30161855	17 A3.3			IPA							  	ESTs									
435.5323	428.8620	401.3469	90.0582	91.8387	103.4748	5.0772311e-05	2.15092	8.71990	6.56898	1363514	1446141_at		chr1:188503427-188503922	1 H5			IPA							  	Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130049J04 product:unclassifiable, full insert sequence.									
125.8149	125.1290	127.4106	25.7968	22.3451	38.6829	0.01172417	2.16371	6.97859	4.81488	1363536	1446167_at		chr6:38733170-38733515	6 B1			IPA							  	Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930417E23 product:unknown EST, full insert sequence.									
107.6002	111.5327	116.1609	31.5076	28.9785	35.8248	0.00088635164	1.80447	6.80361	4.99914	1363593	1446224_at	19 C2	chr19:36665196-36665583	19 C2			UGA	Mm.61107				226098		  Hectd2	HECT domain containing 2, mRNA (cDNA clone MGC:178371 IMAGE:9053363)			acid-amino acid ligase activity;; intracellular;; ligase activity;; modification-dependent protein catabolic process;; protein modification process	cell;; cell part	cell part;; intracellular	catalytic activity	ligase activity	cellular process;; metabolic process	catabolic process;; cellular metabolic process;; macromolecule metabolic process;; primary metabolic process
54.9001	68.8915	56.6484	29.1738	25.6825	35.7090	0.0056087066	1.00047	5.90298	4.90251	1363599	1446230_at		chr18:21346309-21346850	18 A2			IPA							  	Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930418O04 product:unclassifiable, full insert sequence.									
470.2001	485.9386	454.2227	90.1393	76.0707	99.0206	0.0012329286	2.41867	8.87634	6.45767	1363613	1446245_at		chr2:52721981-52722503	2 C1.1			IPA							  	Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030463N01 product:unknown EST, full insert sequence.									
97.9039	83.4940	97.0095	22.3499	38.1765	32.4208	0.012829803	1.61376	6.53232	4.91855	1363652	1446284_at	15 D1	chr15:58871422-58871951	15 D1			UGA	Mm.215481				211401		  Mtss1	Metastasis suppressor 1, mRNA (cDNA clone IMAGE:5343395)			actin binding;; actin filament organization;; actin filament polymerization;; cytoplasm;; cytoskeletal adaptor activity;; cytoskeleton;; filopodium assembly;; muscle organ development;; nervous system development;; SH3 domain binding;; signal transduction	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; non-membrane-bounded organelle	binding	molecular adaptor activity;; protein binding	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; multicellular organismal process;; regulation of biological process	actin filament-based process;; anatomical structure development;; cell communication;; cell projection organization;; cellular component assembly;; cellular macromolecular complex subunit organization;; macromolecular complex subunit organization;; multicellular organismal development;; organelle organization;; protein complex biogenesis;; regulation of biological process;; regulation of cellular process
680.0408	669.7630	722.5169	219.8846	322.6587	305.4064	0.01437126	1.30827	9.43129	8.12302	1363692	1446324_at	5	chr5:15445246-15445625	5 A2			UGA	Mm.445336						  	Transcribed locus									
219.3186	216.2710	234.0584	55.7863	89.3368	71.0276	0.01172493	1.65699	7.80144	6.14444	1363787	1446421_at	3	chr3:68407435-68407941	3 E1			UGA	Mm.448005						  	Transcribed locus									
522.8414	468.4297	519.3505	101.5126	89.1817	115.5708	0.00040537873	2.30855	8.97416	6.66561	1363841	1446475_at	14	chr14:120692309-120692809	14 E4			UG5	Mm.453644						  	Transcribed locus									
66.3173	65.7148	77.2464	13.2299	21.4879	16.3409	0.0046651649	2.05975	6.12029	4.06053	1363875	1446509_at		chr2:131342326-131342825	2 F1			IPA							  B130066H01Rik	RIKEN cDNA B130066H01 gene									
767.4668	821.5117	818.7366	144.4612	149.5121	178.7410	0.00061389231	2.35432	9.64778	7.29346	1363963	1446598_at	11					UGA	Mm.441616						  	Transcribed locus									
135.0681	139.0443	145.4135	57.0676	57.9317	74.0400	0.0077328444	1.15995	7.12699	5.96704	1363986	1446621_at	4	chr4:8740998-8741542	4 A1			UGA	Mm.410534						  	Transcribed locus									
216.2075	214.2630	185.3755	95.4112	100.2825	84.1238	0.00040367059	1.13845	7.67794	6.53948	1363991	1446626_at	16 B1|16 11.0 cM	chr16:18321758-18322258	16 A3			UGA	Mm.265990				27883		  D16H22S680E	DNA segment, Chr 16, human D22S680E, expressed (D16H22S680E), mRNA									
288.3186	271.1169	286.9852	71.0462	90.3918	87.1506	0.0022182314	1.77496	8.13971	6.36475	1364275	1446921_at	11	chr11:11901351-11901733	11 A1			UGA	Mm.438641						  	Transcribed locus									
91.9000	98.3205	96.0602	31.8773	38.5551	46.3896	0.011848648	1.30942	6.57576	5.26634	1364301	1446947_at		chr2:135743824-135744212	2 F3			IPA							  	Unknown									
560.5491	570.3365	560.1990	77.1344	78.8355	77.4250	3.3915162e-09	2.85712	9.13872	6.28160	1364367	1447016_at	5			chr5:64550855-64565499	5 C3.1	RSQ		XM_001476849	1	1	100046817		  LOC100046817	PREDICTED: hypothetical protein LOC100046817 (LOC100046817), mRNA.									
93.2839	97.7725	87.8000	33.5884	40.8376	40.9829	0.0015115138	1.27746	6.53702	5.25956	1364419	1447071_at		chr19:55849331-55849773	19 D2			IPA							  	Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230007B16 product:unknown EST, full insert sequence.									
51.0538	40.4049	38.6752	15.7512	17.0158	18.2765	0.0025797685	1.34188	5.42791	4.08604	1364442	1447096_at	1					UGA	Mm.395135						  	Transcribed locus									
169.0606	168.0111	179.1933	73.2563	80.9476	69.9972	0.00052185778	1.20539	7.42639	6.22101	1364822	1447526_at		chr5:119054873-119055103	5 F			IPA							  	ESTs									
106.9335	122.7080	111.0269	52.8367	59.8079	45.2108	0.003539699	1.11670	6.82481	5.70811	1364823	1447527_at		chr8:47839851-47840054	8 B1.1			IPA							  	ESTs									
8708.4505	9096.3150	9183.7127	3522.4624	4182.4789	3367.7075	0.0036011473	1.29136	13.13471	11.84335	1372102	1447812_x_at	6 A3.3					UGA	Mm.39046				68794		  Flnc	Strain C3H filamin		Focal adhesion CLASS Environmental Information Processing; Signal Transduction; MAPK signaling pathway [PATH:mmu04010] Cellular Processes; Cell Communication; Focal adhesion [PATH:mmu04510];; MAPK signaling pathway	actin binding;; actin cytoskeleton;; actin filament-based process;; cytoplasm;; cytoskeleton;; membrane;; muscle fiber development	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane;; non-membrane-bounded organelle	binding	protein binding	cellular process;; developmental process;; multicellular organismal process	actin filament-based process;; anatomical structure development;; cellular developmental process;; multicellular organismal development
3872.9896	3869.2951	3842.8185	680.4346	707.2991	497.9465	0.0036623631	2.63623	11.91501	9.27878	1364970	1447891_at						IPA							  	Unknown									
127.2222	203.5696	128.8888	64.9612	65.0472	88.4698	0.022269522	1.05284	7.22352	6.17068	1372187	1447937_a_at	4					RSQ	Mm.440578	NM_178649	15	15	108816	RP23-388P16.10	  4933409K07Rik	RIKEN cDNA 4933409K07 gene (4933409K07Rik), mRNA.									
209.4228	196.3370	179.1335	86.7933	103.1029	85.0448	0.00085002609	1.09158	7.60412	6.51253	1365020	1448049_at	10 B5.1					UGA	Mm.23846				108829		  Jmjd1c	Jumonji domain containing 1C, mRNA (cDNA clone IMAGE:3676222)			chromatin modification;; iron ion binding;; metal ion binding;; nucleus;; oxidation reduction;; oxidoreductase activity;; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;; regulation of transcription, DNA-dependent;; transcription;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ion binding;; oxidoreductase activity	biological regulation;; cellular component organization;; cellular process;; metabolic process;; regulation of biological process	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; nitrogen compound metabolic process;; organelle organization;; oxidation reduction;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process
423.8846	443.0281	428.8158	200.0665	179.6936	168.1996	0.0020491131	1.24508	8.75433	7.50925	1372269	1453435_a_at	1	chr1:164804576-164805571	1 H2.1	chr1:164805177-164828843	1 H2.1	RSQ	Mm.10929	NM_018881	1	1	55990		  Fmo2	flavin containing monooxygenase 2 (Fmo2), mRNA.		Drug metabolism - cytochrome P450 CLASS Metabolism; Xenobiotics Biodegradation and Metabolism; Drug metabolism - cytochrome P450 [PATH:mmu00982]	endoplasmic reticulum;; FAD binding;; flavin-containing monooxygenase activity;; integral to membrane;; intrinsic to endoplasmic reticulum membrane;; magnesium ion binding;; membrane;; microsome;; monooxygenase activity;; NADP or NADPH binding;; oxidation reduction;; oxidoreductase activity;; oxygen and reactive oxygen species metabolic process	cell;; cell part;; organelle;; organelle part	cell fraction;; cell part;; endomembrane system;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; organelle membrane;; organelle part	binding;; catalytic activity	cofactor binding;; ion binding;; nucleoside binding;; nucleotide binding;; oxidoreductase activity	cellular process;; metabolic process	cellular metabolic process;; oxidation reduction
270.1845	275.2630	275.4620	71.8476	122.6409	84.6470	0.019764328	1.59321	8.09606	6.50285	1365603	1453512_at		chr14:120797869-120798366	14 E4			IPA							  5430437C10Rik	RIKEN cDNA 5430437C10 gene									
119.0483	133.2581	133.3976	61.5283	58.5704	55.2770	0.00011146441	1.13640	7.00436	5.86796	1365654	1453586_at	19 C3|19 35.5 cM	chr19:40816546-40816931	19 C3			UGA	Mm.2824				12495		  Entpd1	Ectonucleoside triphosphate diphosphohydrolase 1, mRNA (cDNA clone MGC:18369 IMAGE:3674983)		Purine metabolism;; Pyrimidine metabolism CLASS Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mmu00230] Metabolism; Nucleotide Metabolism; Pyrimidine metabolism [PATH:mmu00240]	ATP binding;; ATP catabolic process;; basal lamina;; calcium ion binding;; G-protein coupled receptor protein signaling pathway;; hydrolase activity;; integral to membrane;; magnesium ion binding;; membrane;; nucleoside-diphosphatase activity;; nucleoside-triphosphatase activity;; nucleotide binding;; platelet activation;; purine ribonucleoside diphosphate catabolic process	cell;; cell part;; extracellular region;; extracellular region part	cell part;; extracellular matrix;; extracellular matrix part;; extracellular region part;; membrane;; membrane part	binding;; catalytic activity	hydrolase activity;; ion binding;; nucleoside binding;; nucleotide binding	biological regulation;; cellular process;; metabolic process;; multicellular organismal process;; regulation of biological process;; response to stimulus	catabolic process;; cell activation;; cell communication;; cellular metabolic process;; coagulation;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of body fluid levels;; regulation of cellular process;; response to external stimulus;; response to stress
85.5694	73.1617	90.1924	37.1552	42.8375	35.2929	0.00087025504	1.10979	6.36899	5.25920	1365728	1453688_at	9 A1	chr9:3412610-3413165	9 A1			UGA	Mm.245482				244672		  Cwf19l2	CWF19-like 2, cell cycle control (S. pombe), mRNA (cDNA clone MGC:159188 IMAGE:40130000)									
89.0823	103.1829	102.7695	29.7178	35.8548	37.7594	0.00058697899	1.51776	6.61647	5.09870	1365738	1453698_at	4					UGA	Mm.447147						  	Transcribed locus									
203.0790	243.3040	240.4023	92.3646	118.5636	83.9307	0.0045977529	1.23064	7.83394	6.60330	1366017	1454141_at	10	chr10:69393723-69394253	10 B5.3	chr10:69393067-69394318	10 B5.3	RSQ		XM_001474884	2	1	70557		  5730416O20Rik	PREDICTED: RIKEN cDNA 5730416O20 gene (5730416O20Rik), mRNA.									
966.2950	961.9017	945.5457	406.4809	435.6952	369.5715	0.0025965571	1.24905	9.90369	8.65464	1366423	1454617_at	13	chr13:81034763-81035269	13 C3	chr13:81022682-81035303	13 C3	RSQ	Mm.423137	NM_001042591	1	1	105171		  Arrdc3	arrestin domain containing 3 (Arrdc3), mRNA.			cytoplasm	cell;; cell part	cell part;; intracellular;; intracellular part				
56.6816	47.6452	57.2635	28.0236	16.7551	28.4394	0.031722979	1.17790	5.74620	4.56831	1366492	1454768_at	12	chr12:17179290-17179470	12 A1.1	chr12:17178905-17183694	12 A1.1	RSQ	Mm.40173	NM_201531	1	1	382571		  Kcnf1	potassium voltage-gated channel, subfamily F, member 1 (Kcnf1), mRNA.			integral to membrane;; ion channel activity;; ion transport;; membrane;; potassium channel activity;; potassium ion binding;; potassium ion transport;; protein binding;; transport;; voltage-gated ion channel activity;; voltage-gated potassium channel activity;; voltage-gated potassium channel complex	cell;; cell part;; macromolecular complex	cell part;; membrane;; membrane part;; protein complex	binding;; transporter activity	ion binding;; protein binding;; substrate-specific transporter activity;; transmembrane transporter activity	establishment of localization;; localization	establishment of localization;; transport
1701.1270	1795.4319	1793.4260	872.0241	956.6963	779.1138	0.004036819	1.02502	10.78363	9.75861	1366859	1455399_at	4	chr4:133784017-133784469	4 D3	chr4:133783956-133794314	4 D3	RSQ	Mm.331958	NM_001081047	1	1	194231	RP23-354H24.4	  Cnksr1	connector enhancer of kinase suppressor of Ras 1 (Cnksr1), mRNA.			cell cortex;; kinase activity;; protein binding, bridging;; Ras protein signal transduction;; Rho protein signal transduction	cell;; cell part	cell part;; intracellular;; intracellular part	binding;; catalytic activity	protein binding;; transferase activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
1476.9868	1386.8793	1457.6050	420.5623	399.5442	425.2883	1.355471e-06	1.79492	10.49182	8.69689	1366875	1455418_at	10	chr10:52993290-52993843	10 B3			UGA	Mm.138292						  	Transcribed locus									
461.7847	447.4748	444.7372	180.7945	231.4670	221.5834	0.0085713207	1.10299	8.81785	7.71486	1366899	1455455_at	3	chr3:85673879-85674282	3 F1	chr3:85673767-85691315	3 F1	RSQ	Mm.119926	NM_177130	1	1	320302		  Glt28d2	glycosyltransferase 28 domain containing 2 (Glt28d2), mRNA.		Metabolic pathways CLASS Metabolism; Glycan Biosynthesis and Metabolism; N-Glycan biosynthesis [PATH:mmu00510];; N-Glycan biosynthesis	transferase activity			catalytic activity	transferase activity		
323.3480	312.9609	330.9818	147.9682	111.6427	84.0424	0.021983894	1.53082	8.33246	6.80164	1367030	1455660_at	15 43.3 cM	chr15:78180890-78181373	15 E1	chr15:78156419-78181431	15 E1	RSQ	Mm.235324	NM_007780	1	1	12983		  Csf2rb	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (Csf2rb), mRNA.	IL 3 signaling pathway	Apoptosis;; Cytokine-cytokine receptor interaction;; Jak-STAT signaling pathway CLASS Environmental Information Processing; Signal Transduction; Jak-STAT signaling pathway [PATH:mmu04630] Environmental Information Processing; Signaling Molecules and Interaction; Cytokine-cytokine receptor interaction [PATH:mmu04060] Cellular Processes; Cell Growth and Death; Apoptosis [PATH:mmu04210]	cytokine receptor activity;; cytokine-mediated signaling pathway;; integral to membrane;; membrane;; protein binding;; receptor activity	cell;; cell part	cell part;; membrane;; membrane part	binding;; molecular transducer activity	protein binding;; signal transducer activity	biological regulation;; cellular process;; regulation of biological process	cell communication;; regulation of biological process;; regulation of cellular process
725.0123	771.4184	778.8885	262.1185	351.4379	353.0913	0.0098371036	1.24780	9.56617	8.31837	1367085	1455744_at	17					UGA	Mm.458985						  	Transcribed locus									
818.7012	769.6025	721.9888	239.0936	236.5545	241.3855	0.00073991668	1.68611	9.58700	7.90089	1367261	1456139_at		chr17:12960003-12960449	17 A1			IPA							  	Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130073E08 product:unknown EST, full insert sequence.									
315.2422	293.4688	313.1209	126.8402	137.4310	137.7956	2.5277584e-05	1.19738	8.26265	7.06527	1367275	1456160_at	11					UG5	Mm.455208						  	Transcribed locus									
719.2288	725.2630	795.3966	130.1038	145.5268	176.3627	0.0011517525	2.31905	9.54273	7.22369	1372399	1456209_x_at	7	chr7:71051754-71051840	7 C			UGA	Mm.446212						  	Transcribed locus									
151.2188	190.1222	188.1675	92.3481	84.1225	84.3209	0.0049947982	1.01530	7.45572	6.44042	1367377	1456347_at	17					UG5	Mm.453388						  	Transcribed locus									
619.9110	631.0093	639.9392	226.2746	237.0717	232.4542	1.8289658e-06	1.44244	9.29974	7.85730	1367413	1456413_at	3	chr3:97569364-97569821	3 F2.2			UGA	Mm.443527						  	Transcribed locus									
469.0408	446.6519	423.1519	133.2176	200.8260	106.1008	0.023163345	1.65496	8.80054	7.14558	1367426	1456429_at	18 E1	chr18:65613817-65614305	18 E1			UGA	Mm.132613				240354		  Malt1	Mucosa associated lymphoid tissue lymphoma translocation gene 1, mRNA (cDNA clone MGC:124470 IMAGE:40048908)		B cell receptor signaling pathway CLASS Cellular Processes; Immune System; T cell receptor signaling pathway [PATH:mmu04660] Cellular Processes; Immune System; B cell receptor signaling pathway [PATH:mmu04662];; T cell receptor signaling pathway	apoptosis;; B cell activation;; B-1 B cell differentiation;; cysteine-type endopeptidase activity;; cytoplasm;; cytosol;; hydrolase activity;; I-kappaB kinase/NF-kappaB cascade;; innate immune response;; modification-dependent protein catabolic process;; nucleus;; peptidase activity;; positive regulation of NF-kappaB transcription factor activity;; positive regulation of T cell activation;; protein binding;; proteolysis;; regulation of apoptosis;; regulation of T cell receptor signaling pathway;; response to fungus;; response to molecule of bacterial origin;; T cell proliferation	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	hydrolase activity;; protein binding	biological regulation;; cellular process;; death;; developmental process;; immune system process;; metabolic process;; multi-organism process;; multicellular organismal process;; positive regulation of biological process;; regulation of biological process;; response to stimulus	activation of immune response;; anatomical structure development;; biosynthetic process;; catabolic process;; cell activation;; cell communication;; cell death;; cell proliferation;; cellular developmental process;; cellular metabolic process;; immune response;; immune system development;; leukocyte activation;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of immune system process;; positive regulation of response to stimulus;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of developmental process;; regulation of immune system process;; regulation of metabolic process;; regulation of molecular function;; regulation of response to stimulus;; regulation of transcription regulator activity;; response to biotic stimulus;; response to chemical stimulus;; response to other organism;; response to stress
1145.4934	1305.5997	1295.9852	402.7080	535.7531	502.0988	0.0024217882	1.38708	10.28403	8.89695	1367516	1456610_at	11	chr11:69213540-69214277	11 B3	chr11:69212009-69227177	11 B3	RSQ	Mm.261201	NM_001017426	1	1	216850	RP23-5O23.5	  Kdm6b	KDM1 lysine (K)-specific demethylase 6B (Kdm6b), mRNA.			chromatin modification;; histone demethylation;; inflammatory response;; iron ion binding;; metal ion binding;; negative regulation of transcription from RNA polymerase II promoter;; negative regulation of transcription from RNA polymerase II promoter;; nucleus;; oxidation reduction;; oxidoreductase activity;; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;; sequence-specific DNA binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding;; catalytic activity	ion binding;; nucleic acid binding;; oxidoreductase activity	biological regulation;; cellular component organization;; cellular process;; metabolic process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	biosynthetic process;; cellular metabolic process;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; organelle organization;; oxidation reduction;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; response to external stimulus;; response to stress
30.6956	36.6082	33.8353	12.5870	15.1332	13.3285	0.0002743909	1.30152	5.07150	3.76999	1367580	1456717_at		chr7:119824852-119825087	7 F1			IPA							  	ESTs									
2969.6121	3010.1049	3136.9788	922.8981	834.6489	1035.6519	0.0015837865	1.71181	11.56894	9.85713	1367712	1456888_at	9 F2	chr9:108934151-108934674	9 F2			UGA	Mm.132391				270198		  Pfkfb4	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 splice isoform 7 (Pfkfb4) mRNA, complete cds, alternatively spliced		Fructose and mannose metabolism CLASS Metabolism; Carbohydrate Metabolism; Fructose and mannose metabolism [PATH:mmu00051]	6-phosphofructo-2-kinase activity;; ATP binding;; catalytic activity;; fructose 2,6-bisphosphate metabolic process;; fructose metabolic process;; fructose-2,6-bisphosphate 2-phosphatase activity;; hydrolase activity;; kinase activity;; metabolic process;; nucleotide binding;; transferase activity			binding;; catalytic activity	hydrolase activity;; nucleoside binding;; nucleotide binding;; transferase activity	metabolic process	alcohol metabolic process;; primary metabolic process
282.7037	293.1244	289.3290	77.6777	103.2862	89.6828	0.0043805128	1.68613	8.17169	6.48556	1367751	1456927_at	4	chr4:116008060-116008445	4 D1			UGA	Mm.439252						  	Transcribed locus									
33.2792	42.5394	32.1368	15.7227	16.2060	18.3566	0.0044320206	1.09399	5.15781	4.06382	1367794	1456973_at		chr10:67568247-67568753	10 B5.1			IPA							  	Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930108O06 product:hypothetical protein, full insert sequence.									
589.1180	542.5408	599.7491	141.6304	163.0517	162.9297	6.2074994e-05	1.89031	9.17141	7.28109	1367806	1456986_at						IPA							  	Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430208D19 product:unknown EST, full insert sequence.									
41.0669	66.6873	54.4917	9.9795	10.1156	9.1523	0.0050078501	2.44520	5.72907	3.28387	1367837	1457018_at	14 A3	chr14:24240872-24241001	14 A3			UGA	Mm.343607				16531		  Kcnma1	Calcium-activated potassium channel SLO1 mRNA, complete cds, alternatively spliced		Vascular smooth muscle contraction CLASS Cellular Processes; Circulatory System; Vascular smooth muscle contraction [PATH:mmu04270]	adult walking behavior;; apical plasma membrane;; auditory receptor cell differentiation;; binding;; calcium ion binding;; calcium-activated potassium channel activity;; calcium-activated potassium channel activity;; calcium-activated potassium channel activity;; catalytic activity;; cell maturation;; circadian rhythm;; cytoplasmic part;; endoplasmic reticulum;; external side of plasma membrane;; eye blink reflex;; integral to membrane;; integral to membrane;; ion channel activity;; ion transport;; large conductance calcium-activated potassium channel activity;; large conductance calcium-activated potassium channel activity;; locomotor rhythm;; magnesium ion binding;; membrane;; metabolic process;; metal ion binding;; micturition;; negative regulation of cell volume;; neuromuscular process controlling balance;; plasma membrane;; postsynaptic membrane;; potassium channel activity;; potassium channel activity;; potassium ion binding;; potassium ion transport;; protein binding;; protein homooligomerization;; regulation of action potential in neuron;; regulation of aldosterone metabolic process;; regulation of membrane potential;; regulation of membrane potential;; relaxation of vascular smooth muscle;; response to hypoxia;; saliva secretion;; sensory perception of sound;; sensory perception of sound;; smooth muscle contraction involved in micturition;; synaptic transmission;; terminal button;; transport;; vasodilation;; voltage-gated ion channel activity;; voltage-gated potassium channel activity;; voltage-gated potassium channel activity;; voltage-gated potassium channel complex	cell;; cell part;; macromolecular complex;; organelle;; synapse;; synapse part	apical part of cell;; cell part;; cell projection;; cell projection part;; cell surface;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; postsynaptic membrane;; protein complex;; synapse part	binding;; catalytic activity;; transporter activity	ion binding;; protein binding;; substrate-specific transporter activity;; transmembrane transporter activity	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; establishment of localization;; localization;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; regulation of biological process;; response to stimulus;; rhythmic process	adult behavior;; anatomical structure development;; behavior;; biosynthetic process;; cell communication;; cellular component assembly;; cellular developmental process;; cellular homeostasis;; cellular metabolic process;; circadian rhythm;; developmental maturation;; digestion;; establishment of localization;; hormone metabolic process;; macromolecular complex subunit organization;; multicellular organismal development;; negative regulation of biological process;; negative regulation of multicellular organismal process;; primary metabolic process;; protein complex biogenesis;; regulation of biological process;; regulation of biological quality;; regulation of body fluid levels;; regulation of cellular process;; regulation of metabolic process;; regulation of multicellular organismal process;; response to chemical stimulus;; response to external stimulus;; response to stress;; rhythmic behavior;; system process;; transport
287.3496	302.0509	280.0951	81.3939	131.3736	149.4576	0.0374361	1.30904	8.17836	6.86932	1367839	1457022_at		chrX:80383845-80383937	X C1			IPA							  	ESTs, Weakly similar to POL2_MOUSE Retrovirus-related POL polyprotein [Contains: Reverse transcriptase ; Endonuclease] [M.musculus]									
75.5634	68.5554	79.1126	28.6597	25.7304	24.5257	8.0364161e-05	1.50069	6.21488	4.71419	1367851	1457035_at	1	chr1:175653611-175655251	1 H3	chr1:175653558-175671940	1 H3	RSQ	Mm.440876	XM_980696	3	2	226691		  AI607873	PREDICTED: expressed sequence AI607873 (AI607873), mRNA.									
100.9343	92.6367	76.6541	38.0199	51.2851	32.6128	0.010868772	1.16485	6.48369	5.31884	1367921	1457110_at	19	chr19:34951033-34951536	19 C2			UG5	Mm.447503						  	Transcribed locus									
324.6839	330.9758	337.8339	143.9106	161.8186	148.8891	0.00080094501	1.12943	8.37121	7.24179	1367984	1457177_at	9	chr9:68825877-68826363	9 C			UGA	Mm.451593						  	Transcribed locus									
21.4545	23.2764	21.4221	10.3500	9.1473	8.8597	0.00040290366	1.22429	4.46168	3.23739	1368036	1457231_at		chr12:75015913-75016340	12 C3			IPA							  	ESTs									
395.3050	342.7759	362.0721	41.6182	83.8391	42.3097	0.011886831	2.79216	8.51603	5.72387	1368114	1457324_at	4					UGA	Mm.444175						  	Transcribed locus									
165.6190	182.7630	173.7182	76.4429	80.5701	76.6290	8.1670879e-05	1.15929	7.44205	6.28277	1368128	1457338_at		chr1:136729334-136729876	1 E4			IPA							  	ESTs									
710.9297	660.0291	684.7195	201.1853	210.2235	174.3493	0.00062554271	1.81511	9.41977	7.60467	1368145	1457356_at	17	chr17:12946045-12946480	17 A1			UGA	Mm.411497						  	Transcribed locus									
387.0921	359.7645	320.9852	128.9364	143.8182	150.0465	0.00024148154	1.33531	8.47127	7.13596	1368162	1457374_at	18 E1	chr18:65329357-65329745	18 E1			UGA	Mm.98668				83814		  Nedd4l	Neural precursor cell expressed, developmentally down-regulated gene 4-like, mRNA (cDNA clone MGC:49433 IMAGE:3157137)		Endocytosis CLASS Genetic Information Processing; Folding, Sorting and Degradation; Ubiquitin mediated proteolysis [PATH:mmu04120] Cellular Processes; Transport and Catabolism; Endocytosis [PATH:mmu04144];; Ubiquitin mediated proteolysis	acid-amino acid ligase activity;; cytoplasm;; intracellular;; ligase activity;; modification-dependent protein catabolic process;; negative regulation of sodium ion transport;; negative regulation of sodium ion transport;; protein binding;; protein modification process;; sodium channel inhibitor activity	cell;; cell part	cell part;; intracellular;; intracellular part	auxiliary transport protein activity;; binding;; catalytic activity	channel regulator activity;; ligase activity;; protein binding	biological regulation;; cellular process;; establishment of localization;; localization;; metabolic process;; negative regulation of biological process;; regulation of biological process	catabolic process;; cellular metabolic process;; establishment of localization;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of transport;; primary metabolic process;; regulation of biological process;; regulation of localization;; transport
45.7494	44.0759	46.2488	20.7427	20.9428	22.7143	0.00019151786	1.08017	5.50298	4.42281	1368189	1457402_at	1	chr1:12735585-12736076	1 A3			UGA	Mm.446978						  	Transcribed locus									
41.9833	43.3216	44.0450	16.7000	22.5141	17.6065	0.010669911	1.19904	5.42989	4.23085	1372470	1457429_s_at	1 A3	chr1:15845414-15845595	1 A3			UG5	Mm.131665				226866		  Gm106	Gene model 106, (NCBI), mRNA (cDNA clone MGC:182330 IMAGE:9056224)			extracellular region;; immune response;; polysaccharide binding;; scavenger receptor activity	extracellular region		binding;; molecular transducer activity	carbohydrate binding;; pattern binding;; signal transducer activity	immune system process;; response to stimulus	immune response
735.0825	736.7864	793.6734	317.4966	326.0545	248.4035	0.0052177661	1.35439	9.55976	8.20537	1368255	1457477_at	14	chr14:120728076-120728467	14 E4			UGA	Mm.412819						  	Transcribed locus									
314.3741	286.8186	328.9385	106.8774	152.7630	156.7890	0.014968836	1.17812	8.27400	7.09588	1368327	1457553_at		chr2:6739802-6740289	2 A1			IPA							  	Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630035A22 product:unknown EST, full insert sequence.									
85.8866	86.7986	65.1586	25.9339	24.2638	28.8316	0.0017987956	1.58092	6.29662	4.71569	1368349	1457575_at	2	chr2:52734850-52735317	2 C1.1			UGA	Mm.26187						  	Transcribed locus									
62.6033	66.3902	71.1858	20.5309	21.0899	21.1488	0.0005415698	1.67129	6.05819	4.38690	1368397	1457637_at	15	chr15:93423954-93424139	15 E3			UGA	Mm.447383						  	Transcribed locus									
30.2738	34.9679	41.9520	16.0047	19.6150	15.3816	0.0042063069	1.06706	5.14621	4.07915	1372499	1457656_s_at	17	chr17:51896651-51896813	17 C			UGA	Mm.477120						  	Transcribed locus									
104.4957	104.2635	84.3457	24.2642	27.3846	33.4477	0.0006504949	1.78992	6.60321	4.81329	1368500	1457770_at	14 D2	chr14:70711457-70711852	14 D2			UGA	Mm.270647				213053		  Slc39a14	Solute carrier family 39 (zinc transporter), member 14 (Slc39a14), transcript variant 3, mRNA			ferrous iron transmembrane transporter activity;; integral to membrane;; ion transport;; iron ion transport;; membrane;; metal ion transmembrane transporter activity;; metal ion transport;; plasma membrane;; transport;; zinc ion binding;; zinc ion transmembrane transporter activity;; zinc ion transport	cell;; cell part	cell part;; membrane;; membrane part	binding;; transporter activity	ion binding;; substrate-specific transporter activity;; transmembrane transporter activity	establishment of localization;; localization	establishment of localization;; transport
649.3225	637.4060	655.8977	218.0542	290.3186	322.8936	0.01758482	1.24375	9.33873	8.09498	1368639	1457924_at	3			chr3:60305173-60433670	3 D	RSQ	Mm.255723	NM_020007	2	2	56758		  Mbnl1	muscleblind-like 1 (Drosophila) (Mbnl1), mRNA.			cytoplasm;; metal ion binding;; mRNA splice site selection;; nucleic acid binding;; nucleus;; nucleus;; regulation of alternative nuclear mRNA splicing, via spliceosome;; RNA binding;; skeletal muscle tissue development;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding;; nucleic acid binding	anatomical structure formation;; biological regulation;; cellular component biogenesis;; cellular component organization;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; regulation of biological process	anatomical structure development;; cellular component assembly;; cellular macromolecular complex subunit organization;; cellular metabolic process;; macromolecular complex subunit organization;; macromolecule metabolic process;; multicellular organismal development;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; ribonucleoprotein complex biogenesis
75.0242	69.7699	84.1292	30.5466	29.0232	40.9510	0.0064198008	1.20015	6.24945	5.04930	1368775	1458068_at		chr11:119483657-119484173	11 E2			IPA							  	ESTs									
367.4297	422.3186	434.0081	172.3751	206.1438	171.7630	0.00060993199	1.15463	8.66836	7.51373	1368782	1458075_at		chr1:34077221-34077733	1 B			IPA							  	Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930079L03 product:unknown EST, full insert sequence.									
204.1420	201.1247	183.2335	36.9569	48.9872	51.0452	0.0022858935	2.11570	7.61431	5.49860	1368796	1458089_at	17	chr17:28572812-28573322	17 A3.3			UGA	Mm.445012						  	Transcribed locus									
165.4297	130.0993	161.4034	51.3315	49.2795	41.5543	0.00035870612	1.68215	7.24269	5.56054	1368827	1458121_at		chr6:21969486-21969886	6 A3.1			IPA							  	ESTs									
80.2085	93.2761	81.0174	47.0727	36.4613	39.6197	0.0023398031	1.05201	6.40309	5.35109	1368865	1458159_at		chr19:16221151-16221548	19 A			IPA							  	ESTs									
213.3292	205.3803	219.3551	33.9863	38.4372	39.5957	0.00013741165	2.51254	7.73207	5.21953	1368884	1458179_at		chr17:12967927-12968457	17 A1			IPA							  	ESTs									
104.8685	151.4088	92.1797	30.7100	24.6927	28.2550	0.0046872247	2.03135	6.82704	4.79569	1368999	1458308_at	10 C1	chr10:79529116-79529307	10 C1			UG5	Mm.262102				216161		  Sbno2	Strawberry notch homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3376209)			macrophage activation during immune response;; negative regulation of transcription, DNA-dependent;; regulation of inflammatory response;; regulation of transcription, DNA-dependent;; transcription;; transcription repressor activity			transcription regulator activity	transcription repressor activity	biological regulation;; cellular process;; immune system process;; metabolic process;; negative regulation of biological process;; regulation of biological process;; response to stimulus	biosynthetic process;; cell activation;; cellular metabolic process;; immune response;; leukocyte activation;; macromolecule metabolic process;; negative regulation of biological process;; negative regulation of cellular process;; negative regulation of metabolic process;; nitrogen compound metabolic process;; primary metabolic process;; regulation of biological process;; regulation of cellular process;; regulation of metabolic process;; regulation of response to stimulus;; response to external stimulus;; response to stress
1230.5408	1253.7421	1190.2159	410.5964	520.1011	417.5446	0.0043486049	1.45470	10.25804	8.80334	1369044	1458376_at	14	chr14:120740319-120740808	14 E4			UGA	Mm.440488						  	Transcribed locus									
255.0898	229.1534	238.5366	76.0075	79.1880	92.4345	0.00051105108	1.54915	7.91103	6.36188	1369075	1458409_at		chr14:55370840-55371308	14 C3			IPA							  	ESTs									
64.2993	73.0743	76.9292	23.3472	25.7181	31.1733	0.001356331	1.42379	6.15449	4.73071	1369097	1458432_at	1	chr1:43511003-43511494	1 B			UG5	Mm.447891						  	Transcribed locus									
374.5250	329.3741	364.9433	138.6086	155.7949	156.4852	0.00010220189	1.24526	8.47468	7.22942	1369131	1458469_at		chr16:52052604-52053123	16 B5			IPA							  	ESTs									
107.2877	92.9492	108.6090	35.7645	33.1240	32.6023	0.00020982383	1.60318	6.68224	5.07905	1369156	1458496_at	11	chr11:105800527-105800813	11 E1			UGA	Mm.445046						  	Transcribed locus									
121.6147	140.5148	100.9294	40.1653	40.7944	35.2240	0.0020763563	1.63376	6.90599	5.27222	1369248	1458588_at		chr3:68352972-68353390	3 E1			IPA							  	Unknown									
348.1427	313.2501	373.6611	130.9001	141.9397	134.7686	0.00069192638	1.34150	8.42676	7.08527	1369275	1458616_at	4	chr4:40759193-40759642	4 A5			UGA	Mm.448507						  	Transcribed locus									
391.1069	419.9036	398.2173	113.1539	123.8218	126.5902	3.5816648e-05	1.73482	8.65425	6.91943	1369619	1458969_at		chr8:11786297-11786741	8 A1.1			IPA							  	ESTs, Moderately similar to  RIKEN cDNA 5730493B19 [Mus musculus] [M.musculus]									
683.1283	722.5378	673.8883	380.7653	316.2834	341.1993	0.002329049	1.00567	9.43644	8.43077	1369653	1459003_at	X A6-A7.1	chrX:54043834-54044264	X A5			UGA	Mm.3126				14199	RP23-71G11.1	  Fhl1	Four and a half LIM domains 1, mRNA (cDNA clone MGC:32284 IMAGE:5012394)			cell differentiation;; cytoplasm;; metal ion binding;; multicellular organismal development;; nucleus;; zinc ion binding	cell;; cell part;; organelle	cell part;; intracellular;; intracellular organelle;; intracellular part;; membrane-bounded organelle	binding	ion binding	cellular process;; developmental process;; multicellular organismal process	cellular developmental process;; multicellular organismal development
115.0192	101.7045	109.4645	54.3720	54.3224	52.8791	0.0015322101	1.01180	6.76276	5.75096	1369844	1459205_at		chr7:88577467-88577894	7 D3			IPA							  	ESTs									
48.7064	58.8901	53.1473	18.6303	18.3104	19.4046	0.0012810554	1.50847	5.73931	4.23083	1369860	1459224_at		chr12:113124905-113125375	12 F1			IPA							  	Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732469E12 product:unclassifiable, full insert sequence.									
718.2914	714.1891	689.8825	210.0495	265.0699	169.5384	0.010658023	1.74284	9.46626	7.72343	1369874	1459238_at		chr10:53062351-53062774	10 B3			IPA							  	ESTs									
88.4939	83.0955	87.0105	40.9067	41.0060	39.5791	2.5007127e-05	1.08954	6.42911	5.33957	1370038	1459403_at	9 A3|9 5.0 cM	chr9:21544899-21545228	9 A3			UGA	Mm.3213				16835		  Ldlr	Low density lipoprotein receptor, mRNA (cDNA clone MGC:29127 IMAGE:5052599)	FXR and LXR Regulation of Cholesterol Metabolism;; SREBP control of lipid synthesis	Endocytosis CLASS Cellular Processes; Transport and Catabolism; Endocytosis [PATH:mmu04144]	calcium ion binding;; cholesterol homeostasis;; cholesterol homeostasis;; cholesterol metabolic process;; cholesterol transport;; coated pit;; endocytosis;; endosome;; integral to membrane;; lipid metabolic process;; lipid transport;; lipoprotein catabolic process;; lipoprotein catabolic process;; lipoprotein metabolic process;; low-density lipoprotein binding;; low-density lipoprotein particle;; low-density lipoprotein receptor activity;; low-density lipoprotein receptor activity;; membrane;; protein binding;; receptor activity;; steroid metabolic process;; transport;; very-low-density lipoprotein receptor activity	cell;; cell part;; extracellular region;; extracellular region part;; macromolecular complex;; organelle	cell part;; endomembrane system;; extracellular region part;; extracellular space;; intracellular;; intracellular organelle;; intracellular part;; membrane;; membrane part;; membrane-bounded organelle;; plasma lipoprotein particle;; protein-lipid complex	binding;; molecular transducer activity	ion binding;; protein binding;; signal transducer activity	biological regulation;; cellular component organization;; cellular process;; establishment of localization;; localization;; metabolic process	alcohol metabolic process;; biosynthetic process;; catabolic process;; cellular metabolic process;; establishment of localization;; macromolecule metabolic process;; membrane organization;; primary metabolic process;; regulation of biological quality;; transport;; vesicle-mediated transport
366.7719	358.6909	391.7159	81.8156	94.4264	83.4715	5.5560204e-05	2.10679	8.53967	6.43288	1370044	1459409_at		chr10:59030775-59031053	10 B4			IPA							  	Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130014A12 product:unclassifiable, full insert sequence.									
73.2407	96.3366	95.0563	35.4571	33.8204	35.0140	0.0079745297	1.33254	6.45177	5.11923	1370101	1459467_at		chr14:25054971-25055453	14 A3			IPA							  	ESTs									
129.3122	96.7926	116.4645	34.2207	31.0515	38.7872	0.00052754299	1.71480	6.82509	5.11030	1370104	1459470_at		chr16:92615772-92616302	16 C4			IPA							  	ESTs									
730.4230	720.9127	704.2392	104.2297	176.7560	163.6361	0.01014073	2.31420	9.48873	7.17453	1370187	1459557_at		chr9:48515954-48516379	9 A5.3			IPA							  	ESTs									
89.3458	99.2999	100.0732	30.8986	34.5226	34.6296	3.5381755e-05	1.52903	6.58665	5.05762	1370236	1459609_at		chr8:79928865-79929131	8 C1			IPA							  	Unknown									
127.6944	125.5922	127.5473	27.6067	63.1479	43.9594	0.044602156	1.57944	6.98801	5.40857	1370262	1459635_at						IPA							  	ESTs									
445.9494	429.3697	442.6923	217.2989	175.3499	159.4258	0.0097965933	1.26753	8.77899	7.51146	1372645	1459843_s_at	8 C2	chr8:81862347-81862401	8 C2			UGA	Mm.223717				17125		  Smad1	MAD homolog 1 (Drosophila) (Smad1), mRNA	CTCF: First Multivalent Nuclear Factor	TGF-beta signaling pathway CLASS Environmental Information Processing; Signal Transduction; TGF-beta signaling pathway [PATH:mmu04350]	BMP signaling pathway;; BMP signaling pathway;; BMP signaling pathway;; cytoplasm;; gamete generation;; hindbrain development;; homeostatic process;; inflammatory response;; intracellular;; MAPKKK cascade;; mesodermal cell fate commitment;; midbrain development;; negative regulation of cell proliferation;; nucleus;; osteoblast fate commitment;; positive regulation of gene expression;; positive regulation of osteoblast differentiation;; positive regulation of transcription from RNA polymerase II promoter;; protein binding;; regulation of transcription from RNA polymerase II promoter;; regulation of transcription, DNA-dependent;; RNA polymerase II transcription factor activity;; transcription;; transcription factor activity;; transcription factor complex;; transforming growth factor beta receptor signaling pathway	cell;; cell part;; macromolecular complex;; membrane-enclosed lumen;; organelle;; organelle part	cell part;; intracellular;; intracellular organelle;; intracellular organelle part;; intracellular part;; membrane-bounded organelle;; organelle lumen;; organelle part;; protein complex	binding;; transcription regulator activity	nucleic acid binding;; protein binding;; RNA polymerase II transcription factor activity;; transcription factor activity	anatomical structure formation;; biological regulation;; cellular process;; developmental process;; metabolic process;; multicellular organismal process;; negative regulation of biological process;; positive regulation of biological process;; regulation of biological process;; reproduction;; reproductive process;; response to stimulus	anatomical structure development;; anatomical structure formation involved in morphogenesis;; anatomical structure morphogenesis;; biosynthetic process;; cell communication;; cell proliferation;; cellular developmental process;; cellular metabolic process;; embryonic development;; gamete generation;; macromolecule metabolic process;; multicellular organismal development;; negative regulation of biological process;; negative regulation of cellular process;; nitrogen compound metabolic process;; ossification;; positive regulation of biological process;; positive regulation of cellular process;; positive regulation of developmental process;; positive regulation of metabolic process;; primary metabolic process;; regulation of biological process;; regulation of biological quality;; regulation of cellular process;; regulation of developmental process;; regulation of metabolic process;; regulation of multicellular organismal process;; reproductive process;; response to external stimulus;; response to stress;; sexual reproduction;; tissue remodeling
140.1012	138.0767	143.4757	53.6794	70.7306	63.9552	0.0087096248	1.17159	7.13477	5.96318	1370597	1460147_at		chr13:110432934-110433349	13 D2.2			IPA							  A730009E18Rik	RIKEN cDNA A730009E18 gene