#File:"$$PARAM_MAP_NAME$$"
#"Standard JTV processing"
#"Revised: 4-9-2009"
#"GBS: $$DATE$$"
#
#"(1) Convert array names in JTV data sets to mapped array names."
-jtvFiles:"$$FILES$$"
-jtvInputDir:$$INPUT_DATA$$
-jtvOutputDir:$$OUTPUT_DATA$$
-jtvTableDir:$$TABLE_DATA$$
#
-jtvNamesMap:"$$TABLE_DATA$$mAdbArraySummary.map,$$TABLE_DATA$$EGMAP.map,Affy .CEL file (16),GSP ID (9)"
#
#"(2) Generate HTML web pages to invoke the converted JTV data."
-mapDollarsigns:$$TITLE$$,"$$TITLE.2$$"
-mapDollarsigns:$$TEST_OR_ALL$$,"$$TEST_OR_ALL.2$$"
-mapDollarsigns:$$TISSUE$$,"$$TISSUE.2$$"
-mapDollarsigns:$$TESTNAME$$,"$$TESTNAME.2$$"
-mapDollarsigns:$$PAGE_LABEL$$,"$$PAGE_LABEL.2$$"
-mapDollarsigns:$$DESCRIPTION$$,"$$DESCRIPTION.2$$"
-mapDollarsigns:$$GBS_DESCRIPTION$$,"$$GBS_DESCRIPTION.2$$"
-mapDollarsigns:$$TESTNAME$$,"$$TESTNAME.2$$"
-mapDollarsigns:$$CLASS_A$$,"$$CLASS_A.2$$"
-mapDollarsigns:$$CLASS_B$$,"$$CLASS_B.2$$"
#
-jtvHTMLgenerate
-jtvDescription:"$$DESCRIPTION$$"
-jtvButtonName:"$$TEST_OR_ALL$$ $$TISSUE$$: $$PAGE_LABEL$$"
-addProlog:"$$PROLOG$$"
-addEpilogue:"$$EPILOGUE$$"
-jtvCopyJTVjars:"$$JTV_JARS$$"
#"--- end ---"