#File:paramsSearchFlip.map
#"$$DATE$$"
#
#"Search information read by the search GUI for prompts and menus"
-searchTermNames:"Gene,Well ID,Feature ID"
-searchRowFilterName:"Sample Experiment Groups"
-searchSampleChoiceFile:sampleExperimentGroupsChoices.txt
-searchTermsDemoData:"Stat5a Stat5b 1438470_at 1441476_at 1446085_at"
-searchUserTermList:"LitRefGeneList.txt,Feature ID,Literature Review"
-searchTermsFilterPrompt:"'Gene', 'Well ID', and/or 'Probe' names. E.g., Stat5a, Stat5b, 1438470_at 1441476_at 1446085_at, etc."
-searchRowFilterPrompt:"'Sample Experiment Groups'. E.g., select one or more Experiment Groups"
#
-addPrologue:data.search/prolog.html
-addEpilogue:data.search/epilogue.html
-addTableName:"$$DATA_SOURCE_SUBTITLE$$"
-addRowNumbers
#
-addTableName:"Search database filtered by Gene and/or Probe IDs and Experiment Groups"
#
-inputDir:data.search
-outputDir:data.search
-tablesDir:data.Table
#
-addOutfilePostfix:"-search"
#
#"Database (.txt) and index map of database (.idx) to search" 
###-flipTableByIndexMap:"EGALLDataSet-LitRev.txt,EGALLDataSet-LitRev.idx" 
-flipTableByIndexMap:"EGALLDataSet.txt,EGALLDataSet.idx"
#
$$SEARCH_FILTERS$$
#Maps to:
# '-flipOrder:"Gene,Well ID,Feature ID"'
# '-flipColumnName:"*LIST*,Gene,g1,g2,...gn"'
# '-flipColumnName:"*LIST*,Well ID,w1,w2,...,wk"'
# '-flipColumnName:"*LIST*,Feature ID,f1,f2,...,fm"'
# '-flipRowNames:"*LIST*,s1,s2,...,sp"'
#
-allowHdrDups
-alternateRowBackgroundColor:white
-rmvTrailingBlankRowsAndColumns
#
#-shrinkBigCells:25,-5
-shrinkBigCells:1,-5
#
#"This does multiple header-row data mapping."
-hrefHeaderRowMapping
#
#"These map mAdb Feature Report data to Bioinformatics databases"
-hrefData:"Well ID",http://madb.nci.nih.gov/cgi-bin/clone_report.cgi?CLONE=WID%3A
-hrefData:Gene,http://www-bimas.cit.nih.gov/cgi-bin/cards/carddisp.pl?gene=
-hrefData:"Feature ID",https://www.affymetrix.com/LinkServlet?probeset=
#
#"--------- End ---------"